| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_127935
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_3120 |
2 |
1299 bp |
MLOC_3120.1 |
Available |
Available |
LOC_Os10g31930.1, FRAME:-3, EVALUE:8e-40, 13110.m02790 protein shugoshin-1, putative, expressed |
| MLOC_3119 |
1 |
588 bp |
MLOC_3119.1 |
Available |
Available |
LOC_Os10g31930.1, FRAME:-2, EVALUE:1e-18, 13110.m02790 protein shugoshin-1, putative, expressed |
| MLOC_3118 |
3 |
1362 bp |
AK248863.1 |
Available |
Available |
None |
CDS Structure of MLOC_3120
CDS Structure of MLOC_3119
CDS Structure of MLOC_3118
Contig Sequence (6737 bp)
>contig_127935 6737 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCTCTCTCTCAAAAAAAAGAGAAGTACAAAGTCATAAAAAAGAAGTAACA
CCTAAGAACCTGTTGTTGTTTTTGATTAATGGATATTATTCTCTGTTGAATTTGGCAGTG
CCTGAGTTGCAAGGTGAGCCAGAGGACATATCTAAAGAGAAGGCCCGAATGGCTGCATCT
CAGGTACCTCTATCTTTTCTAATACTAGAATAATTATGCAGAGAATTTTAATTTGAACTG
TTTGAACTCTTGTTAATTAATCTGTATTCCATACTAGGTGAATGGTCCTGTACTTGTTGA
GGACACCTGTCTGTGTTTCAATGCGCTCAAAGGTTTGCCAGGTAACTAATGTGCATTATC
CTTTCTTTTCACTTCCTAAATGAATTCAATGTGCTCAACATGACATAATTTGTTTTGCGC
TGCAGGGCCCTATATGTAAGTCCTTCTCTTCTCCAGGCACTACAACATATTTTCGTATTA
CCAAGTTACAGAAAATAAACATCCTTCACCACTATAACTTATTGAGAAAATGCTTTCAGA
TATCCAGTCTAACTAACCTCTCTGTTCCTTATCTGGATGTTCCGCACACATAATGTACAG
AAAATGGTTTCTAGAGAAGATTGGGCATGAAGGTGATATGGCTACTCAATTCTCCTTTCA
TTCTTTCTAATGTTTGACTTTGTGAATTCATGCATACTATTTCTGCAATTATAGGTTTGA
ACAATCTGTTAAAAGCTTATGAAGACAAATCAGCTTTTGCTATGTGCATCTTTTCCCTTG
CTCTTGGACCAGAGGAGGAACCAATCACATTTGTTGGAAAAACAGCAGTAAGATGTTACT
TAAAATTTTCGTCTGAAGTATTACGTATATGCCATACTAACACTGTATAATGAGAGTGAG
CACATCTGTCAGTATGCCGCTGCAGTCGGCCTACATTCAGAATTGCACATCCCTCTATAA
CCTGGATACCTTGAACTTATATTTTCTGGTGTATTTTGTTTATAAGTGAGTTCAGAGTGC
AGCTAAATTCTGTTGGCGTCAGCATATCCGTTTTGCTAGGGGAACATATTAGTGTTGTTG
GATAAAATAAATAAATTCTATAGTAAGTGGTTTTTCATTCGACGCAGAGAAGCACCGTTA
TCTTGTTAGGTTGTCTGTCTTCATGTGTCCTCATCATAGCACTTTGATCTGTTGTGGTGC
GTTTATTTTGGCATGGACAGTAAAATCTGATGCCGTGGTTTTAGTAAGAAAAATGAAGGC
CGTTTCGCTTCTTGAACGTGTTTGAGATTTCCTTCTCCACATGCAGGGGAAAATTGTACC
TGCCCGAGGGCCTGCTGATTTTGGATGGGACCCTGTATTCCAACCAGATGGATTTGAACA
AACGTGAGTTTCCTGATGATTTCCATTTCTTTCATGCACCCCTTGCGTTATGTACTGACA
GGTGGGTATGTAATACAAATACAGATATGCTGAGATGCCCAAGTCCGAAAAGAATGAAAT
ATCTCATAGGGGGAGAGCTCTTGCACTGGTGAAAGAACATTTCGCTTCTGCCAATTATGA
AGTTCAGAGTGATGGATTGGCTTAAAATTCGTTTTCATGTCTGTTAAGAGTTTCAGAATC
TTCCAAGCTCTACATGTACTCGTTTCTCTTGGAACTTTTGGTGACTGTCACGGATGTACT
GAATTTTTGTCAAGATTCTGATGATTTTTTTTGCATCATGTCTCTTCGCTAGTTGTTTGC
CAGTTGAACCTCAACAGCACGGGGGAGACTTGTATGAGATCTCATATTTAGGTGAGATCG
TAAGATCAACCCCAAATTTCATATTTAGACATTTCAAAAAAATCTGAAATTATTTGACAA
CATTCATGTGGTGTCTACAACCCCCAAAAAAACCAGCTCAAAACTCGATGTAGATTTAGA
GTTTCAAAAAAGACAAATTCAAATGTGAATGCAGCTTTGGTTGAATACTTTGACAGATTT
TGTCTTTTTTGTTTCTATAAATGTAAGTTGAATTATGAGCTGAAACTTTTTGAGGTTGTA
CATTAAATATTGATGCGTGTCTACTAAAAATTACAATGTTTGAACAAGTAATTTTTTTCA
AAAAAATCAATCTCATAGATCTCACCTAACGTGAGATCTCACCAAAGTCTCCCGTATTCT
TTCACACTACAATCTAGATTTTCAAAAAAATTACAATGTTTGCATCTGCAGAAGCAGAAG
ACAGCAAAAAATAAATTAAGAATCGCAACTCATCATACATATCTAACTGGATGCAAAAAA
ACTGCAACCAACTTGTGCTACTGCTTAGGGCCTCCTAAGCTTAATATTGACAGGCATCTC
CTTGTAGGAGGTGACCTTCTCTGTGGCCCGCCGGAGTGGCCTCCCCAGCGACGATCTACG
TGGGAACTGCACCGACGAATCCAGCTGCCACGTTGACCCCTTCCTGTCGTCTCCACCGCC
GGTGGTGAGCTGAACGTCCTCTATCTCGAACAAGTCTTCCCTGCGGCCACTCGACTGCGG
CCTTCTCATGGACTTGCTGCAGAAATAGTAAGAATCAGTGGCGAGCTTGTGGGACCTGCG
TTTCCTCAGATCGAACATTTGATGATTTTGACGAGCTTGTGGTGTTGCTTACCGTCTCTG
TGCGCTCTCCGTTTCCTTGGACGCCACCAGCTTCGTCGGCGCCACCGCAGGTCCCAGAGC
TAGTAAACCAAATGTCAATCAAAATCAGTTAGCATAGCCACGCATGTGAAGAGATGTACT
CCCTCCGTTCCTAAATATATGTAGTTTTAGATATTTTACTAGAAGACTATATACGGATGT
ATATAGACATATTTTACAATGTAGATTTACTCATTTTGCTTCGTATGTAGTCCACTAGTA
CAATCTTTAAAAAGATCTATATTTAGGAACGGAGGGAGTATGTGCCAAATACTACCGGTA
GGGATATATCATGATTACATCGAGATCTCAGCAGCCTCTTCCGGCTGGCGTTACAGGTAG
ACTTTTTAGCACTGGCGGCGTACGACGCATCTGAAGCGGGCTCCACGTCTCCATCCTTGA
GCGGTGCAGCTGCAGCAGCTCTATTGGTGACCAAGTGCCGCGCCGTCTCGTTCGCGCTCT
TCTGTTGCTGGAGTCTGCTGCTCTTCAGCGCTTTCTTTGTCTCCTGTTGTTAGGGACATC
GCGGTTCAGGGCACATGAACAAAAGCATCAAGCAGCAGCATGAACATTTTGCATGAGATG
GTATGATATACCTCAAGTTTCGACGATTTTACTTTGAGGGCAGCTCTCGAGCAGGTAAGC
CCGTGTTGTAGCAATTTCAGCTTCAGAAAGATAAGAAGAAAAACATCGGCTGATCAGATT
TGGGAATGCCATGATCAATTTTTTCTCTAGAAAGTGTCAGCATAGTGTTGTCAAGATTGA
CCAAAGAAGCACCAACTTACCCTATTTTTTCCAAGATTTAGCTCCTGCGAATCAAACATT
CCAAGACAGAGATTAGCCTCGTGGTGAACATGATCAAGTCCACGGTTGTAAAACGGGGAT
AATGGAGTTTCTTGCAGATAATTGGGGGATAACTTACTGCTAACATCTGGGAATTAGCCT
GCGCAAGCTGCCAGTTTGCCAGCCGCAGATTCTGCAGCTCAGCCCTGCTCAACTCTATGA
ATTAGCACTCGCGCATCAAGAAACCCTATCCATCCTAGACAAAAGAGAACAAGCGGTGCA
GGCAAACACTCACTCTCTCTCCTCCAGGAGCTTCACAAGATCTGAATTCTTCTGAAATTA
CAGACACGGGGATTCGAGAAAGAAAGAGGAGCGTTAGCGACCACGACCAATCATTCTGAT
AACTAAGAAAGAGACGGCGGTGGAAATCCGGATCTTGCCTTGACCAGCCGCTCCACGCAC
CTCGACCCGTCCTGCTGCCCCTCGTCGGCCGCGGCCGCCAGCGGCTGCCTCAGGTTGGTG
ATGTCGCAGAGCGTCTTCCTCCTCGCCGAGATGGCGCTGGCGGCGCCGCGCTTCCGCATG
GCGGCCATGGCCGCCGCGTTCATGGTCTGTGCCACCGCCGCTTGAGCCGGGTTGGCCTGC
TGGGGCGCGAAAACAACGATCTCCATGGGATTCCGGTCACGGGGACGGCCAAAGGGTGGG
TCTCCAAGAATGGAAGGAGAGGGATTGGGGAGCCGGAAGCTTTGGGGAGAGAGGGATTTG
GGAGCTTTCTCGGTCGATGGATCGGAGACGGGAAGAAAGTCAAAGGGGCAACGGCTAGTA
GGGGACAACGGCCCTGTTTGGATACTCTAACCTGGTTAGAGTTAGAGTTAAATTTTAATC
CTTAAACTAACCTGAACTAACTGTAACTCTAAAGACCCTGTTTGGATACTCTAACTCGGT
TAGAGGTTAGAGTTAGATTTTAACTCTAGACTAACCCTGAACTAACTCTAACCAAAGAGG
TGTTTGGATGGAAGGGTTAGATTGCCAATAAATGCACTTTTTCCAATCATTTGGTTCCTT
TATCTAGCATTTTGTGTGGTGGAGGAAGAGAGAAAAGTAACTTTTTCTGGACCCCACCTA
ACTCTAACCCAAAAAAGCACCTCTTGGGTGGGTTAGATTTTTTGGGTGGGTTAGATGCAT
CTAACCAACTCTAACCCACCCTGTTTGGATTTTTGAGGGTTAGATGAGTTCAATCTAACC
AACTCTAACTCTAACCCTAGGATCCAAACAGGGCCAAAGGTGTTTGGATGAGAGGGTTAG
ATTGACAATAAATTCTCTTTCTCAATCATTAGCCTACTTTGAACCTCTCTCTTTTCTTGG
ACCCTACCTACTCTAACCCAAAAAAGCACCTTTTGGATGGGTTAGAGTTTTTGAATAGGT
TAGATGCATCTAATAACCAACTCTAACCCACCTGTTTGGCTCTTTGAGGATTAGATGACT
CAAATCTAACCCACTCTAACTCTAACCCTTGGATCCAAACAGGACCAACGGGTATATGAG
GGGGCCGGCGTAACGTTCGAATCAGAGTGTTTGGGTCAGGTGAGTGGACGGAGCGGATTG
AGCCACGTTGGATACGGCTGTCGGTCAGATGAGTGGACGGAGCGGATTGAGCCACGTTGG
ATACGGCTGTCGTATCAAGTGGGTACATACTTGGGTAGAGACAACGCGTATGGGTTTCAC
AATGACAGTAGGACCATGTTCGACGCTCCACCCGGTCTTCCAAACCACAATGGAATGGCT
ATGAATTTTCTGTTTAGGGCATGGCTCCTAAGATGAACATACCCACATACCCGGTCTTCC
AAACCACAATGGAAGCGAGTCATCTAACCGTACCCATATACTCCTTCTATCCCAAAATAA
GTGTGTCAACTTTGTACTACCTCTAGTACAAAAATGTACTAAGCTTGAGACATTTATTTT
GAAACGGAAGGAGTATATTTGAAGTGGATTTGAATAACAATGATAATTTTCAAGAAAACA
CGATGAAATTCAATTACTTTCAGACATAACTTACATAAAATGAGCGATATTTTCGTTCAT
TCAACTAGAGCTTTAAAAAAACTAGCTTGTAGTGGACGGTAACCTCGTATGTCGTCTCGG
GCTGGCCCACGTCCGTGTCGTCCTCAGAGCCATGGTAGTCCTTCCAGCTATGTAAGCGCA
CGAGTGCGGCACCCCACCTCGTGCTCGTGGAGGAGCTGCTTTGCTTCCTCTTGCGTCGTG
GGAGGGTCGCGTCGGCCAATGTCGACTCTCGCCGGGTGTCCTGGAGGCCTTGCCCATGCC
GTTGGCAGAGGAAGTGCCACTGAACGACCACTCGTCATGATCTTGACGAGCTCCGCATCT
AGTCGGCATCGGCGCCGCGTAACCTTCTCCGCACTGGTCAGCAATAGCTCATGGGCCCTT
CTGCGTGGGCCGATGCGAGCGCCTTGTCGGATTTGGCAGACATCGAGCGGTGTGCCGCAT
CGGGCCGCTCGTGCTCAGCCTCCAACCTTGATGTCCTCTCCTCCGCCATGACGATGTTGC
CCTAGGAATAGTGGTCGTCGTTACCGTAGTCCTCAAGGTAGCGGAGGAGGCGCCCACACG
CCTTCGTGAGAACCTCCTTCTTCACGACCTTGACACATCATTCGCGACGTGACGCCGACT
AGTCGATGCGTCCGTAACGGTAGTGCGCCGGTGACACCGGATCCTCCTTCATGCAGCGCC
CGATTTGGATGTCACGGTTGCGTGGGTGGGACACCGGCTCTACCTTCATGAGGTCAAGAA
GTGGCGACGTCGGCTCTGCCTTCACGTGATAAGACTTTGGCTAGGGTGACTCCTCAACCA
CACAGGTTGAAGGTGGCATGGGCGACATCGGACCATGTTCCGACAGCGATCGCTCCATCA
CGAGCTCCATCTCCCGCACATTTAAGTCATCCGTGACCACTGCCTTAGTGTACATGTACG
ACTGTTGTTGTGGTGGCTGGTCCTCCTTGTCGTCTGATGAGATGACGATCTCCTCCTTCT
AGGAGGTTTCGATGACCACAAAGGTCGAGGGGCCCGGAGAGAAACGATGGGGTGCCAAGA
TTTAGACCCGGAGGGAGATTTGGAGCCTCCGCCTACCGACACGGATAACTATGACTTTGG
CATGGTTTAGACGGTTATAACGCACAAGATGTGATCGTATCCTTATTTTGGCTCGAGGCC
TTGATAGGGATAGAAGCGCATCTCGTCATTTTGCAAGATGGATATCCTTACAAGTACATG
TACAGAAGAGATGTGTA
