| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_127028
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_3013 |
6 |
1878 bp |
MLOC_3013.1 |
Available |
Available |
LOC_Os12g39630.1, FRAME:-3, EVALUE:0.0, 13112.m04117 protein CAMK_CAMK_like.49 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
CDS Structure of MLOC_3013
Contig Sequence (7268 bp)
>contig_127028 7268 assembly3_WGSMorex_rbca.fasta
GAGCGGTACTACCTCTAGGGAGCGGTGCTACCGCCAACCCGGAGCAATACTACCGCTTGG
CACAAGCGGTANTACCGCTCGCCACTGAAACATCCATAACTTTTGCATATGAGCTCCGAA
TCGAGCGAACCCAAGCTTGTTGGATTCACGACGACAAGAGCTATCCAAACAATGACCTCT
CATCCTCGTCGTCGTTTTGAGGCACTGTCTCGTAGGTTGTGCATCATCTTCTGCATCCAA
TGCATCACTCACCTTTCTCTCACTACTAGTAGGTTTAGCTGGTCCAGATCTACGAGGAGT
ATGTGTCCTCTCACTGTTAGCACAGTTAACTGGTGTGGCACCCTTACCCTTATCCCACTC
TTTTCGTGGCTACAACACCTGGATTTCAATTTTAGCGAAACCTTTGCGAGTGTTCAAACA
AAAAAGAGTTTCTAGATGCTCGTCGCAAGTTAGTGACACAAATTTTTGCTCACACCTATT
AAATATCTCAGGTCAACGACATCGGATTGGCTCCAGGGATAATCAGAACAGAGGGATTTG
CATAAATCCTTAAACAAAATTATTGTTTCTACCACCTTTGATAGCAAAATCCACATAAAT
GTTGTGCTTTTATACCTCGCAGATAGCGAGTTTCCATTCTAACTGCGAGCAAAAAGGCAA
GCGTTGGATCAATCCTACGGTTAGGCAGGCAGTAGTTCAGACAAGCAAGCAACAATTCAT
GTGCCCATTGGTCAAATACTAGACATATTCTCCAGTTAGATCGCACATTTCAAGGGGTGT
GAGGCTTACCGAGTCGTAACCCATGAGTTCTTCACTGCTCCTAGTTCGACCCAATCCTCC
CCACGATGGATGGGACGAAGATTGATGTCCCTCAACATTGCCCAAGCAAATGCAATTAAA
TCGGCTGCTATAACTCCACCCTCTAGTTCCCCTCGATCCAGTACAATCTTGGGCCACGGA
ATGCGACAGATCAATGCACCGTGGGCGAGGGTGCATGTTGATTATAGGCTAGATTGGGGG
ACGGTGGTGGGCTGGCTGGGTAGGGTTTGTGGGAGGGGGTGGTAGGTGTGGTGCGGCGGC
GGTGGCAACAGGGGAAACTTCTCGGGCACGGGCTGTTTGAGATGTGGTGAGAGAGAGAGA
GAGAGAGAAAGACGTCCACCTAGACAGGCCCCACCTGTAGTTAGTTGCCCCCGCCCCACT
AGTCAGGATATGAGTCGGCCCTAATAGTCAGAAGGAGACACAAAAAAACTAATCGGGAGG
TAACGGTCAAAGAATTTGACCGGGCGTAAGTGCAACATTTGGGCTTTTGCGAGCAGGTGG
TGGAGAGGGCGGGCAAAAGTGAGCAAAGTTCTATCGCTTGAGCAAAACTGAGCATAACTA
AGCAACCAGAGGCACAAAAATAGAAAACCCTATCACTTTTATATACTTTATATATCACTT
TAATATTATTTTTATGGACTAACCTATTAATTTAGTGCCTAGTGACAATTTTTTTGCATG
TTCTTGGGTTCCCAAAAAAATTCATACCTATCGAAGTTCAAACACAACAAAACTTCAAGA
GGATTTTTCTGGAATACGTGTGACATAGAAGCTTCGAGAGGCGGATGAGAGATGCACCAG
CGGCCCACAAGCTTGAGATGCGCGCCCCTTAGGCGGCTCCACCTAGTCTTGTGGGCCCCA
TGGCCCTCAGTTTGACCTATTTCTATCTCCATAAATACCACAATATTCAGAAACCCTCGA
AGAGAGACCCGAAAGAATTTTATCTCCACCGCAAGCCGCTACTCTTGTGCAATCCAATCT
AAGACCCAAAAAATCGCCATAAAGTTTCATTGTGTTTGGAGTTCTTTTGGTATGATTTTT
CTATGAAAGAAAGAAATAGGCAAACAAACAAAAACCCGCAATTGGCACTAAGTTAATACG
TTAGTCCCAAAAATTGATATAAAATGGTATATAAAGCATACAAAATTGATAATATAATAG
CATAAAACAATGAGTGATTATAGATACGTTGGAGTCGTATCAATGGCACCCTACGATGAC
TGAAACCCACCGAAGCATCCCCGACATGTAAGAATTCACAATGGTAATTAAGATGTAGGA
AGGTGCAAGCATGCTAGTGGTGAAATACCTGCACTGTGGAAAGAGGTGAGAGGGTCATCA
TTATGTTCTCCGAAGAAATAATTGTCATAATTACTCCATGGATATTGGCCAACAAGATAG
CAAAGAGCCCCATGTGTGTGACAAGCTCTCTATATCCATGAAGATAATGAACATGCAGAG
AGAGAGATCATCAACCACATGTTGTTGTGGCACCCTAACGTCATCTGGTTCAAGGAGGTG
ATTAAAAATTATGAATGAAGACTATATGGAGGTGACCCGATTGACTACCATCAAGTACTA
CCATCTGGTCAATCCGATGATGATGGTGGGATCACGTTGTTGCAACCTCACTGTGTGGGG
GGAAGAAGAAGGTTCTGAGTGGCTTTCGATATTTTTATTGTAGAAGTTCTCTAACACCTT
ATGGTCCTAGTGTGTTGTTTTAAAATAATGAGGGAGCAACAAGGGATCAATTGAGATATT
CTCAAATGATTGGCTCGCTCGCGTATTTAGTTGGCTCTACGAGGCCTCACATTTCGTTAC
TGTAAGAAAAATAAGTCGGTTTGTTCTAGATCTGGAAGATGGACATTGGCATTGCTCGTG
GGATGATAATGTGCTATTTGAAAGGTATTGTTAATTATAGAGTTCACAATACCGAGTACC
CCCAAGGGTACTCAGGGGTTATAGTGATGGTTCTGATGGACTTAAGACCACAAGTGGTTA
CATGTTTACACTTTGTGGTAACGTTGTTTATTGGAAGTCTTGCAAGTAGACCATCTTAAC
AAGGTCAACATGAAAAATAAAACTCGCGACATTAGACACAACCACTATTGAAGTAGAGTG
GCTTCACGAGCTCTTGGTAGATTTGTTGGCGGTAGAAAACCCAATACCAACATCCTAATC
AAATGTGATAATCACAGTGTCAAATTTATGAGAAACTCTGAACTTCTAGTATTGGACTAT
ATAAACACATCTAAGAATCTGGCAGACCCCTTAAGAAAATAGTTTATCACGTAACGTGAT
AGACAATGCATCGTGCGAGATGGCTTTGAAACCCACTGCATAAGTTATCCATGATGGTAA
CCCAGTCTATGTGATTGAAAATACCGTGAAGTAGAATTGACGAGACATGCTATTGGTTAA
CTGGGAGGGGAGTGTATATTTTATGAAGACACACTCCATTATGATGCAATTCTCTCCTAA
TATGTGTGTCGATTGATCTTTATTTTAGTGTGTTCTTAGTGGCTTGGGTATGCCAAGATG
TTGTCCTACATAACATTTTTATAGACACAACTAATGAGTTAGACTGTTAAACACCGCATA
CTATGAGAGTTGAGTGCCTTCTGGTAAACTCATGAAGAGACCTCGGAGAATGACATATAA
TCTCCTATCCACGGGGAAATCACTCGGTCGGGAGCCTAGCATCGATCAAGGCTTTACGAG
AGACTTATTTGCATCACATGCTATTCAAGGCATGGTCAGTTGTTCAAGTTGTAAACGAGT
GTCGTGTGAAGCTCTAGGTTCATCAAAATATCGGTATATAAACAATGTTATAAAACTATA
GGCAAACTCTATCTACCTTTGGGATCAGTGATGGATTGCTGGAATTATTGGGTCTCTTGA
CTATTTATTATTTCCAATAACTCCTGAAATCCTAGAGGCTCATATGCTCCTTTCATGACA
AGAGGAGTGTGGAAAGTTTAGTCCCATCCTAGTTGTCAGGGATTGTTAGCAATTGATATT
ATTTGTATACAAAGTATAAATATGACATCTTGACAACAGTGAAGTCAGATGAGAACAAGA
CTATGAAGAGGTGGACCGATCAGAAGATTGTGCCGTCATCCGTCTTGGATAAAAACCTTT
CTGACCACCCGCTCTAATCACATATACACAGCATCGAACAGCGGTTGATACTCTATTCGT
TCGGTTGTTAGCAATCGATCAACAAAGGACCAGGTGTCGGGCCCATGTTAGGGCCAGTCC
TTGCATTGTATAGGCGGAGTGCAGTCTCAGGGGCCGCGGGCAGAGCTGGCGTTGCACCAC
AAAGTACACGTATAATACAGCATTGTTCATCCAGCGATTTCGGGTGAATACTCCCTTTTA
TCAACTAGAGATTACAGGAAACCCCAACATATTTTGTTAGACAACACATGCTACACAATC
AGCAGCAACACCAATTTCAGACTCAAGCAGTAGCCTGAATACAAACCTCTCGATGTACAT
TTCTACACTCTTCTTAACACAAAATGCCACTCAACAATCTGGTGCGTGTTCAAGAAACAA
ACAAGGTGGAAGATCGCAAACACCGCTTCTGCACATACAGATATTCACAAGTTTACTACA
TGGCGTATACTATCTCCCCGCTGCTGTCCATGTCGATATCGAGGTCCGAGTCCAGGTCAT
CCATATCGTCGTCGAGGTCAAGGCCGTCAGGCAGGAACTTGTTGATTCCGAGGGCGCTGG
CCGCCGGTATGGTGGCCTCTGCCATTATCTGCATGATCTCGTTCATGTTCTGCATCGGTT
GGTCAGGCTCCTCATACTGGTTGCTCACCGTGGGACCGTCCATGAGGTCAGCTGGGAGGT
TCTTGAGGAACCATGGGTGGTTCTTTATCTCAGGTATGGTGATCCTCTGCAAGCTCAAAT
AGCACAGGCGTTATCCTGATTCCTGAGAGCGGAACGGGTGAAACCGTGTGTGTGTCGATG
GAGTGAGTGAGCACTCACCGTAGCTGGGTTGGCAACAAAGATCCTTGAGAGAAGGTTCCG
GCAGTCCATGGGTATGTGAATATAGTCCGGAATCGAGTACTGAACGCCTAATATTTTCTG
AAAATTGTGCTTGGTGTTTAGCTGTTTGGTCATCTGACTGCAACTAGTGGAATTGCTAAG
CCAACGGCTGGCGGCATACCTGAATTGTCATTTTGAAATTCTTGGGATTTTCTGGATCCT
CGAAAGGGTAGGCGCCAACCAACATCACGTAAAGGGTTACGCCACATGACCACACATCGG
CAATCTCCATTCAGAGACAAATTATTAGTGCTTGAGCAGAGAACAGGAAGTACTTCAAAT
GTTTTTTTACTTTTTTTTTTAGATTGAGAAGTACTTTAAATGGTTGCTCCTCAAGACCAT
GAACTACTCATGCCAAAGAAAGGTGGACGGAAGATTCATAAAGCAAGTAAAGCTTTTGTG
GCCGACCAAAATGATTCAAGTTAGGCAGCAGATGTTGGCAGAGTATGCATGATGTTGGCA
GAGTATGCATGAGACGGTTTAAACTTGATTTGAAAGCGCCAAGGTGGACGCATACCTTGC
CATCGTATTCTTTCTTGATCAGAACTTCAGGGGCAATGTATGCCGGAGTTCCAACAGTTG
ACTTTGGTTGAGAATGAAGAACTGATGACTGTAAATTAGAGAGGAATTTCTGGTGTAAAT
CTTTTAAAGATCTGGTATCCATCACAAATTTCTGGTGTAAGATGGTTCACATAAGCAAGC
AGTCAGGCACCGCTCCACCAGATTGATTAATAGCACAGAATACCTTGGAATAACCGAAGT
CGCATATCTTGAGGCGAGGGGTGGTGCTTCCATCCAGCAGAGTGTTCTCGAGCTTTAAGT
CACGATGGCACACTTGCTTGACGAATACAACAGATTCATGTCGTCAATTGCACAGAAAAC
TACATAGAAAGGTGCAATCATGTGGTAGTAGTATATATAATTCGGGTAACAGCTGGCTGA
TACCAATCATACCATTGAATGGCAGTAGCTAACTCCAGATATCAGTTGCTGGAAAAAGAA
GCGAGCCTGAACATACACACACATGAACTGAGTTAACAAAAACGACAACTGTGCCGTCAT
ACATACAAATCTTGAGTCGGGAGAGATACCTCGTCGACGCTGAATCGACCGGCGGTGCAG
ATGCGGTCGAAGAGCTCCCCGCCGGAGGCGTACTCCATGACGATGGCGAGATGCGTCGGC
GTCAGAATAACCTGAAGAGCAGCAAACACACAGAAAGACAGAGTTTGTTCCTCGCATCAT
TCCACCAGAGTCCACATATAACCGTCCAAGGATCGATACTGCAAGCCAAGGCGATTGTAC
CACCGATCGTATGCTCACCTCCTTGAACCGGATGATGTTGGGGTGCCGCAGCGACCTGTG
GTTGATGATCTCCCTCTGCACGTTCTCGTCGATCTGCGCGCGCACACGCACGCATCAAAC
TTGTAATGAATAGTAGTATCAAAAGCCATGGCTCTTGGTTCGGCGTGCGCGTGCGGGAAA
CTGGGAATAAATAATCGAAGCGTGGTGGCCGATGCGGTTTGGAGGTGGTACCTTCTCGCC
GCGGTCGATGTACTTGACGGCGACGAGCTCGCCGGAGGCGCGGTTGCGCATGAGGCGGGC
GACGCCGAAGTTGCCGGATCCGATGCTGCGGACCAGCTCGTAACGGTCGCCGTCGAGCAT
CACCGGCACATCGCCCATCGTCCCCCTCTCCATCGCCCCCGCGCCGACGACTCTACCGCC
GCCCAAGACTGACACGGAGGTCCCCGCGCGCCCCCTCTCTCTCCTTATCTCGCTGTCGAA
CCTTTCTTCCTAACTCTGGCCGCGCGCTTTTGTCAATTCTTATTGCCGCCACTATCTGCA
TTCTGGAGTACTGCTGCTACAAGAAGAGAGGAGGATGACGTCATGGGGCGTGCTTATCCT
AGGCTCGCCTTTTTTTTCAGTTGACATTCCCTCCTAGGCTCGCCTGACTAGCGGGCCCAC
CTGTATCATTGAAGCAGTCCAGGAACACGGTTTTATTTCAAAAAAGAAAAAATCCACTCA
CGGCTTTCAATCGTACTGGAGTGCGGGCCCGGGTGCGGGCTGTCATGGTGGGGCACCTGA
GTCGGTATCATGTGTATGTAGCGTGTGCAGACAAGATGGTGGGAAAAAGGCGGGGAAATA
TCTCGAGGTGGAGGCGTGGAGCCGTAGCCGGGATCAAATTATACTACTCCCTCCGATATA
TTTTTACTGTACGTATTAAATTTGTGTCAAGTTAATTTTACAAAATCTTTACTTATAATA
ATTATAATTATTAATCTATATCTATACCCATACCCCTAATAATAAAGGGGAAACGTTACT
TTTCAACCGACGGATCCTGATTTCGCGTCCACCGTCTCCTTTATTCGCCACGTGGCCGGG
CGGACGAG
