Contig Data
morexGenes
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Map Locations of contig_126685 (4500 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_126685

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_2971 1 440 bp MLOC_2971.1 Available Available None
MLOC_2970 2 2030 bp AK364919 Available Available None





CDS Structure of MLOC_2971






CDS Structure of MLOC_2970






Contig Sequence (4500 bp)

>contig_126685 4500 assembly3_WGSMorex_rbca.fasta
GCCAGCCGTGGGCCGACAGCAGGCTCTTCGGCCACCCGCGGGCCGACGGGCCCTCTTCAG
CCTTCCGCCAGCTGACAGGACCCCTTTTGGCCCACCAGAGGCCGACGGGGTGCTAATTTT
GATTTTATTTAATTTCGACATATGCTTTTCGAATTTGGTAGAAAATAGGTAGTATTTTAA
AAAAAATCATTTAAGCCTCGTATCAATAGATTTTTACAATATTTAAACTAAAAGACTGTG
AGTTAGTGCCATTTTGTTTACATCGTAAACATTGAGCCCTCTCTCATTTTTTTCCAAGAT
TTGCCGCTGGCAGCAAGTTATGTGTGAGCGCCTCCTCACACTGTATACCAGGAGACGGCA
GGGAAGTTGCACACTCCAAGGAACGTTCAGACACACGCACACCCATCCGTCGACAGCAGC
TAGCCAGCACGGATCATGCATGTCAGCATCGTTGCGCTGTGCCAAATTCCGTTCGGCGGA
AAGAACTAGCAAGAAGAAGATTGAGTGGCATCCACACAACAAAGCCAGCGTAGGGTGGCG
ATATAGTACTATGACGGGCACCCGCGCGCGCACTCGAGGACTTCGTGATATCTTTCTCCG
CCGGCCAGACGGACGGACGCACCAATCCGTTGCTCTCCGCCACCAATCCTAAAGCAGATA
TACTACGTACTTATAGGTTCTTACATTTCTTTACAGAAAGAGTAGTTGCGTGGAACCTTG
TTGCCCGTGATTAGTGGCTCGTCCTGGCCGTCCAGATCCCTTGGCCGGATCGACGGCGAC
CGCTTGGGCTTTAGCCAGAGAAAGGCGCATCGCAGCTACCATTGGCGTCCAAGCAACCGA
TTCCTCGGCCTCGAAGCAGCTTAATCAGCTCCAGGATCAAGCATCTTATCTTACAAATCG
ATTGTCCCGGTCTTAGTATAACTTTAGCAATTAGCAGTAGTAGCAACAGAAAAGGTTTAA
GCACACCCGTACGTTTAACGAACTTGCATCTTGTCTGCTTCTGCTTATTTGGGAGTGGAG
AGACATTTGCATGTATGCTAGTCGACCGCTACTCCGGCACGGCGGCGTCCAAATGGCGAC
TTCGCCGGCCGTCCAATCCAACCAAACATGTTACGTGGACGCCTCACCGCGCGCATGAGC
ATGCCGACGGGTTGTAGAGTTGCTTCAACGCAAGTCCAAGCTCGTTTGCGTGGGCCGGTG
TCGTGTGGATTAATTTGATTTTATCGCGCGACTTCCCTGCCTTTGTGACGAATCCATCGC
ACCGTCCATTGATTCATGATTGCATTTCACAGAAGCACGTACGCAAAGTGTTATGGTTAT
TTTTATGCAGAGATTAACGGTGACCTACTGAGCTTTGCTTGCTTCTGCCCAAAGCAACAA
ACCAGAAAACGGAACTGAGACACCACGTCTCTCCGTCACCCGTCTTTTCCCCCGTCAGAG
ATGCAATGCAACCGTCCTGGCATGTCGATCGTAGATCCCCCTCTGTGTGTGTGTGTGTGT
GTCTGTGGGGATACGCTTTTACGTGCCAAAAAGATGTGTGGATAAGCCTTCCTCTTTTGT
AGAGCTACATCATGCTCTACCACTGTACGTTAACCTCGCGTCCAAGATTCCTCTGGCCAC
GCAGCAAATTCAGCAGTGAGCCGAGGAGTTTGTCACGCGAAAACGTCACGTAACCGATCA
TGCGTGTATATATCCAGTGCCCCGCGCATATGAGTTTGTTGCAAGCACGACTGCCACTTG
CTGAATGGAACTCATTCCGGAACAGAAGTACTGCCAGCGCTTAGTTCAGGTTTGAAGCAG
TCCGAGAGATCTCTTTCAGAGGCGGAGAAGCCAAGTCTTGGCCGCTACAAGTAGGAGTAA
CTTGTAAGTGTAGCTCACGCCCCGCTTTCGTGCGCTCCTGGCCGCTGCTGTTGCACTCAG
GTGTGTCGGTTTGCCGGTTGCAGGCGCGGTGTGTGTGCGCTCCGGGAGGAGCGAGGTCGT
CGGGGATGGACGGCGAGATGGGCGAGGACCTGCTGGCGGAGATCCTCGTCCGGCTGCCGC
ACAAGTCGCTGGCGCGGTTCCAGTGCGTGTCCACCACGTGGCGGGGCCTCATCTCCGCCG
ACTACCTCCGCCGGAGGCTGCCGCTCATCACGTCCGGCGTGCTGTTCAACGACGGCCCGC
GGGACGGCGAGGGCGGGAGGCGGGCGTACACGTACGCGCGCGCGTTGTCGTCGGCGGGTG
AGGATGGCGGTGAGGGCGGTGGCGTGGCAGAGGCCGACGACATGGCCTTCTTCCCGTGCC
ACGCCACGTCCAGCATCATCGACGGCTGCAACGGCCTGCTGCTCTACTACGCGTCCTACC
CGGCGGCGTTCCACGTCGTCAACCCGACCACGCGCCGGTGGGCGGCGCTCCCGGCGCCGC
GCAGGAAGACGCTGCTCTCCGTGCTCTCCTTCGACCCCTGCGCCTCCCCGCACTACAAGG
TGGTGTGCTTCACCGGGTGGCTGCCCCGGGGCGCCTCCGTCGAGGTGTTCGACTCCGAAC
CCGGCGCGTGGGGCGAGCACGAGCTCGACTTCGGCCTCGACACCGACGCCATGTCGGCCA
CCATGCACTGCTTCGACGGCGCCGTCCACGTGCTGGCATACTCCGGCCACGTCGTCCGGA
TCGACCTCCGCACCATGGCGTGCACAGTCACCGCGCTCCCGGCGCCCGTGAGCTACCGGG
CGCGCGCGGGCCACTGCCGGGGACGCCTCCGGTACGCGTCCAGCGACGGCTCGCGCCTCA
CGCTGTGGGAGCTCGTGGACGCGGGCAAATCCGAGTGGACGGTGAAGCACGAGCTGGGGG
TCGGTGACCTCGTCTCCGGCGGCTCGCGCCATCCGGCTACCGCGACCTTCGTGTTCATGG
CGTTCCACCCGGAGAGGGAGGTGGTGTACCTGTGGACGCCGTCGAAGCTCATTGCGTTCA
ACATGGAGCAGATGCGCATCGAGGAGGAGTGCGTGTTCGGGTCCGGGAAAGGAGACACGC
AGCTCATACAAATCTGGCTGTTTCCGTTCTCGCGCCATTTGTCCAGCTGCTTGGCCTGAG
TGGCGATCCCACACACCATACGAATGTGATCTTCTCCAAGAATGTGAGTCCGTTTAGTGT
TTACCAGTCCACACGAATGTACGTAGTAGCGTCCAACACCACACGAAAAAAAGATACTAC
TACCTCGGTCTCCAAAATAAGTGTCTCAACTTTGTACTAGCTCTAGTACAAATTTGTACT
AAGCTTAAGACAGTTATTTTGAAACGGAAGGAGTACGTAGCAAAGTTCAAATGTGGTATG
CACGATACTATAATCGTTATCTATATTGGGTGTAATGCTTATTCTGTTAAACAATTTGTT
CAGTTACTTGCCTATTTGACTTATTCCAATTTCTATTTAATTTGCCTATTGACTCATTCC
TATTTCTTGTTATTTGTTGCCAATCTTTTTTAGACACCTTTGAACCACGCTTGTACTCCC
TCTGGTTTTAGATATCATCTTTGTTTCGAATTACTTATCGCGAAAATAGATATATCTAGA
TATATTTTAAACACCTTTGAACCACGCCATTTGGCTAGCTGCTTGGCCTGAGTGATACCA
CACACCACGCTGGGAAAATGCGCTCGGCAGCTGAGGATATGATCGCCTCCAAGAATGTGG
GTCATATTTACTAGTGTACATGAATGTAGTTGTGTCCAACACCACACAAAAAAGATTCTC
TCTCCGTTCCTAAATATAAGTCTTTTTAGATGTTTCATTGAAGGACTACACAGGGATGTA
TCTAGACACACTTTAGAGTGTAGATTTACTTATTTTATTACGTATGTAGTTTTTTAATAA
AATCTTTAGAAATAATTATATTTAGGATCGGAGGGAGTACTACGTAGCAATGTCCAAATA
TGGTATGCATGATACTATTATCATTATCTATATTGGGTGTAATGCTTATTCTGTTAAACA
ATTTGTTCAGTTACTTGCCTATGACTTATTCCATATTTTTACTATTTAATTTGCCTATCG
ACTCATTCCTATCTCGTATTATTTGTTGCCAATCTTTTTTAGACACCTTCCTACCATGAT
TGTACTTCATCCGGTTGTTATACTGCCTCCATTTTAAATCACTTTTCGTAGAAATGAATG
TATCGAGATGTATTTTTTATTTTAAATATATTTATTTATATTTATTTTTGTAAAAGTAAT
TCAAAATAGAGGAAATATAAACTACGGAGTCACAACACCCTCCTTATGAAAAATGATTAT
ATTTTTGCCTCGTATATTGGTGCTTATTAATACAAACGTTGGATGCAAAAAAGAAAAAAA
TCTGAGAGAGAGAGACACCACATGTGACATGTTTTTTCAAAGAAAACAATACGACCGTAT
TCTCATATATTTTTTAAAAAAATCCATTATTTTTGTTTTGTTCTTTGATTTTTTTTTTCT
ACTTACACCTAAATATTTAGTTTTCAAATTTGAATTCTTTGAAATTTGTGAATAACTTTA