morexGenes - Barley RNA-seq Database

Contig contig_125321

Source Contig contig_125321

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_125321 (2781 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012

Predicted Genes from contig_125321

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_2849	1	1775 bp	AK360857	Available	Available	None

CDS Structure of MLOC_2849

Contig Sequence (2781 bp)

>contig_125321 2781 assembly3_WGSMorex_rbca.fasta
GCATGAACAACCAGCACAGCACACAAGTATAATATAATAATGAAATGAATCAAATCAAGT
TTTTTAATGGGGTATATCGACATTCATAAACCTGATAACCAAGTTGATTTAATGTGAGAA
CTATGTGATAATAATCCGGCAAGTACCGACGAAAACAAAAGTTATAAAACATGTCGACAT
GAGATCTAGTTTTGAAGATCTCGTCGCGATAAAGTCAGTGGTGAAAACGAATCATTAATT
AAGATAACGGTTTGAGAGATAAATCTTTTTTTAAAATGCAAAATTAAAAGAATACGTAAT
GATGTCATCTTACATGGGTGCAAAAATGGATGGAAGGAAGACGCCCCATGAAAAGACTAA
CATGGGGCGCCCAGGGACGGCCCCGTCCCCTAGTAAAGTCTTTTATTATATCCGTCTTGT
ATACATGGGAAGATCTATCTATTCCTTACTAGGCAGGAGCACATCATGGATCAGCCCGTT
GAAATTGCGGTGAGATGAACCGCCGGGCTTGGCCGCCAAGATTGCCTTCACCCGCCATTT
CTCCGCCATCTTCCTCATCTTCTTCCCACTTTCACCTTGCATGAGTTCAGTGATAAGGCC
TGTGACGGCGTTCCGCTGGACATTGCTATCGATCTCCATGCCGACGCCCCACTCGTTGCA
TTGGTACCGGCAATTGGTAAGCTGGTCCGAGAAGAAGGGCCAGCTGATGACTGGCACGCC
GCCGCACATGCTATCCATTGTCGAGTTCCAGCCGCTATGTGTCAAGAAGACGCCTACAGC
CGGGTTGTTCAGCACCTCCTGCTGCGGGCACCAGGACGCCATGAACCCGCGGCCTGCCGT
CTCTGCCATGAACTCAGGAGGAAGCACCGCCGCGTCGCCTTTGACGAGGTCACGCCGGAT
GATCCACATAAACTGCTTACCGCTGTTGGCAAGCCCCCACGCGAACTCCAGGAGCTGCTC
CTTGGTCATGACCGTGATGCTTCCGAAGTTTACATAGACGACGGAGGCAGGCTCTTTACC
GTGGAGCCACTGGAAACACTCCTCCTGCTCTTTCCACAGACTAAGGCTACCAATGGTACT
TGTCGAGCGCGGGGCTAGTAGAGTGAGCGGGCCAATCGTGTAGACCTTGGGTCTGCCGAG
GAGCGCTTCCATGGCCTCCACTGCCTCGCCCTCGAGGTCGTCAAAGCTGTTGACGATTAC
GGCCGATGCCCCGACCGCACTCTCCGTTACTTTGATGGCATACTCCACCATGAATTCGTC
GGGGTTCATGCTGCGTATGAAGCTCGGGAAGTCCCTGAGCCTCATGTTCCTCAGCCCCGG
TAGATCCTCCACTGGGGTGTCAAGGTATCCATCAGTAAGTTGGTTCACATCTGCAGTCCA
TGTACACAAAGACATAAATGGGGAGGAGAATACAGCTCGCGTTATTAGTTGCACGATGTA
TGTACTGTGTAAGTGGTTTCGAATTTCAGTTTCAAAAATATTTCTGCTCTAGCCGAAATC
AGTGAATTTTGGTTATTTCTGCCTAATTCAGCACTGAAGCTTTCACATGCATTTAATTGA
AATCGAACCAAATATTTAAATAGGTATTTGAGTCAGCGTGTACAACGTACGGTGATGGCT
CAAATACTTTGACTGAAACAGTATCTACCAAAATGACACTGAATATCACCCGACGTGAGA
TAACCCAAAAATTGTACAGTGTTCAAACTTCAAACGACATGTGTACCTTGAAGTGGGACG
ATGCCACGGTCGATGAGGAGCCGAAAATAACGGAACCCGAGATAGCTAACCGTACTTGCC
GTCCAAAGCTGGACATAGGGGACATCTAGCTCTTTGGCAGCATCCATGGCGAAACACATG
AGGAGGTCTGAGACAACGCAAGTCACAGGCGGATGGCCTCCTGTGGAGGCCGCGACATTG
AGCTCGGCGAGGAGGCAGCGGAAGGGGCCAAGGCAAGTCTCCAAGGTGGACTTGCAAAGC
GACGGGATGTCCTGCGTGACATCGTCATCCACGTCGCCCGACGGCTGCGGCAAGCCATCG
GGGATAGTGGCGAAGCAAAAGCCCGGGGAGCCAGCCAGGGCGGCGGCGCCGCGTGTGCGA
ACAAGGCGGGCGTGGTTGTACTCGGAGTTGACGAAGGTGACGTGCAAGCCGTGGGCGTGG
AGCAGGTTGGCCACGCTGAGCATCGGGGTGATGTGCCCCTGCGCCGGGAACGGCAGGCAC
ACGGCGTGTGGCTTCTCCTCGCCTGCTCCTTCCATTGGATTTCTGCAGGTTTGGTTCATG
GACAGGCAGACCGCAGATGGGCTGTTTTGTGCGTGCGTGTATACCGTATACCTATATAAA
AAAAATTCCTGTAAATCAAGGTGGGGCGAGCGCCACACCTCGCCCTACCAGGAGCTCCGC
CTGTGGTTCATGCTCCAAAATGTCGACTCTTTTGTGCTTGTTTTGGTTGGTTGTAAATCA
AGTTGATCTGGATATGGATAGGGATATGATTTGGCTTTACTCTTTTGTTGTCAGGGATCC
GGTACGGCCTAATCATAGGAATAGGCCAGTGCTCTGCGTCGGCCTATCGGTCGAAACTTT
CGGCCGGCCGCGGGCCGTACGATCCACCAATCCCGGACGTCCGTACCGTTGGATCTTCAT
GCAATATTTTCTTTTTGATGCAGCAAAATTCGTTGCGATGCAACAATTTTTTCAACGGTT
GCAATAAAAAATAAAATTTATAGTAAAAAAAAAATCTACGTGATCATAGCAAAAAAAGAA
GCTGATGATGCGTGGTAGCAA