Contig Data
morexGenes
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Map Locations of contig_125279 (4480 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_125279

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_2842 2 2661 bp MLOC_2842.1 Available Available LOC_Os03g49500.2, FRAME:-1, EVALUE:0.0, 13103.m05367 protein ethylene receptor, putative, expressed





CDS Structure of MLOC_2842






Contig Sequence (4480 bp)

>contig_125279 4480 assembly3_WGSMorex_rbca.fasta
CTGAATGGAATGATTTTGAGTATAAAATTTTTGGTAAAAAACCTTCACCCAATTTTGAAT
TGTTAAGGCAACAGCTTTATGTAAGAGTGGAAGCGCCAAAAGGTGAATTGAGGATTTATC
TAGTAGGAGATGATAGCCTTTTTCCCTAGAGATGAAAAATCCATCCACCCGGTTTTATTA
ATTTGCAAATTCAACCGGCGTTTGATTTGTGCTACAACCGGTATCATTTTTTGTTACAAT
CATTCACTAAAAAAGTTACATACATGTTCGTCAGAGTTGCAACCCGAGTTCATCGAATTG
TTTTTGCTACAATCCAATTCTTTTTTTGCTATCACGCATCATCAGCGCCGTTTCTTTGCT
ATAACCACATTGATATTTTTTTGCTACAACCATATTTTTATTGCAATCATGGACGAAAAT
TGTTGCATCGTGAACAAAATTTGTTGCATCGAGAGAATAATACTGTATGGAGATCTAACG
GTGCGGTCCGCATACGGATCGGGCGGCCCACGCGCGGCCGGCCGAACCATTCGGCCAGCG
CAAAGCACTGCCCTATGGTTATACTCCGAGTTTCCGCTATAATTTTTACAGATCTACAAA
CTATCACTTCCACTTTATGCATACTATTTTTCAGAACCCGTTGAAACCTTTACACATGGT
TCCTTCCCACGGAGAGTAGTTTCGATCTGATATAACCGGGGTCACGCGCACACGGAATAT
GCAAATTCGCTGGACAGCATATGCTACTGAACGCAGCGAGTTGATGCTGCGCCCAGGAAC
ATAACTGCAATCTGAAGTCCCATTTGCTATACACATTATTTGTACAATATATGCCAGCTA
CAGCAAGACTAGGCACAAAATTAGAGGGGGGACTCACAAAACTAGCTACTGACTCCCTAC
TCGACACCAGCACCGTCGACCGTTTACACTATACCTCATACGCTTCTCTGGTAACGAGGC
TTCAGGGAAGACGGCGGCCACCTCTCCTCGTGAAGCGCCTTTGGACCGGATGATTCGGCA
TTTGCACTGCCTGGCCAGGCGAGAGGGGTCAGCTGCTGCCGGTATGCGTCTGTGTTGTCG
GACACGCCGAGCCTGACGATGAATGTGGCCGTGCAGCCTCTTCCTGCCCCTTCACTGTCC
AGCCAGATGTGGCCTCCCATCAGAGTCACAAACCTGTGTAGGAATGTTCAGAATGGCTTC
CAAGTTTTAGAATGAGCGATTCACTAGGTTAAGAACCAAGTGAGCACAATAACATGTACT
ACGTATATCTTTGTGTGCTGCTTCAAGAGAAGCAGAGTTACCGAGCACAGTAACATATAC
TCTAGAAGGTTTTACAGGTAAGGAGATCGAGATGTGATTGTGAGCTACCTCCTGCAGATG
GCAAGGCCAAGGCCACTTCCGCTGTATCCTTGGTTGCCTCCAGGCTGAGTTTGGGTGAAT
TTTGTGAACACATGGGGTAGATCCTGAGGACTAATGCCACAGCCTGTATCCTTCAGCTGC
AATAGAAAAACAACAGAGGCTTTAATAACCAAGAAAATTGCTAAATGATTACACATCAAT
TTTACAGTTAGATAATGTTTTTGATCAGCCAGTTCTCTCAAAATCCATCATGTTTCTGTT
GCCTAAATAAAACCTTTTATTTTAGTTCAATTCCCAGGAACACTGGTAGCAGCTAGATCA
GAGTTTTAAGTAATGTCAGCATGCGAGCTTTTCTGATGAAATGTTCTTTTAACTGAATCT
GATGGAAGTTTTTGTTGTTATATCTTAACATAGCTCTTGCATAGTTGAGAACGTGATGGG
TTGGTTTGGGTTTCTCGTCTCATGAAAAACATCTGGACATAGACAGTCGAATCGACAACT
TGTAGATGACTTGATGAAACAGTCCAGCCGAGATTTCAGAGACTCATGCCCATAGCCCAA
TAGTGACAAGTAATGGTCAGAAGTGGCTAATTTCATACATGCACATGTTGAGCAAAGGTA
TCTCCAATGACTGAATATGCACAGGGCATTTAAGTTGTCTTGTATTTAGATCTTGATTTC
TGAATCCTATGGCGAAAATATGAGCGCATAGCCTTGACAAGAAAAATCATTCACACGAAT
ATCTATAAAAGTTACCTGAACTTTCAAGTAGAAATGGTCATCACTTGCAGCTGGATGGAA
ATCTGGGGTTCTGAACTCTCTTAAGGAATCAGGCTTTAGAATGGAAGCTAGAAGTGTAAT
GTGGCCCTCCTTGGTGAACTTAACAGCATTACCGGAGATATTTAGGATAGTTTGCATTAG
CCTCTTTTCATCGCCAATAGCACATAATGGTAAATCTGGTGCTAACATAACCGACATAGA
CAGCCTCTTGATAGCTGCAATTGGTCTGATGAAACCCATCACCTGTAACACCAACGAAAA
TTCTCAGGCAAGTGAACTATGCATATATACTTTATAGAAAAGCAGAGGATAATATTGCAA
CCTCTTTGAAGACAGCATGAAGATTGAATGCTCTGATCTCCAATTCAAGGCTGCGATCCT
CAAGTTTGGAAAGATCCAACACATCATTGATAAGTGTTGCTAGAAGATTGCTGCTCTTTA
ATACTGTTTCCACCATTAAACGCTGCTCAGGAGTTAGTTCAGTTTCCAAGAGTAAGGACG
AAAGAGCTATGATTGCATTCATTGGTGTTCTCATTTCATGATTCATAACAGCTAGGAAAT
CATTCCGAGCACGGATGGCCGTTTCAGCATCTCGTCGAGCTAAATCCAGGGCAACATTTT
GCTCCATTAGCAAATCACGCGCACGCATGGACTCTTCAAGGATAGCTGCATGAGAGAGTG
CAACTGCTACCTGAAAAAATGGGGGGGGGGGGATCTGCTTCAATACCATCTCATGATAAT
GATAATGTATTAATGTTAGACTAACATCTATTAATCTTGGTATAGTTCGGTTTCAAGGAA
ACATTTTTTTTTTTAGAATGATCTGATGTTATTTGCAGAAGCCCTTGAAAAACTCGTAGT
TGTGAATACATAAAACATTTCCCAGTTGAAGAGTCTCTATCGGTTGAACATCATGTGCCC
ATGCATTTCACATCTTATGCATCATTCACTTCTACGTATATCTATATTATATATAACCAA
GGGAAAAGAAGCGGAATTGTGTTTGAGAAAAAAGAGGCGGCATTAACCTGATCGGCGACG
ACCTCAACAAGCTCCAACTCATGCACATGCCAGTTCCTTGCACTATCAGATGGAAGCATC
AGAACCATAATAGCATAGCTTTTTGCTGAAAGCTCTGGCCAGTCATTTATTTGGAAGTTT
GAAAGATTTAGAAGAGGTACTCGCACTGCAGCCACTTCTGGTGGAACATATCGTCCTGCA
AGAGGCCGGATCCGTGCCAAAGGGGATGTGTGCGGTATTATGATTGCTCGATTGCTACTG
AAAACTTGGTTGATAACAGGAAGATTAATTGATATAGATGACCCAACAGTAATTTGGTGG
CGCAGAGTATGTGAAAGCTGAAGATTTGAACCGCTTCTTGATGGCATCCACAGGGCACAC
TCTTCGAGACCCAAGGTCCTTCCTAGCTCAACAATGGTAGTCTTCAAAATCGTATGTCTA
TCGAGTGTGCTTCTGATTTCATGAGTTAGCATCCTAACATGTCTCCCGGTCTCTTCCTGC
GTCCTTATCAAGCCCATCTCCCAATCAAGCTCTTCAGCTTTATTCTTCAGAAACAGCTCC
CTCGTTTTGACACTAAGCAGGTCAGGGATGATGTGAACAAGCATCAAAGCCGTCGCGCAG
GAAACGACGGCCGTCGAAACCTTGGCAACCGTCATGACCATAGCGACGGTCTTCGTGTGC
GTGGTGAAAGTCCACAGGTTGATGAGATGGGTCGCTCCACAAAGGACTATAAAGGCACCA
AACTGGATGAGAACCCATCTGTACGGGAAGAAGGACGACTTCTTCACGAAGTAGATGAGC
TCCAACGGGATGGAGAAGTATGCGAGGGCTATGAAGAAGTCGGAGATGTACTGGTACTTG
ATGAGGAGCTCGTCAGTCGGCCACAGCGGCTCGATGCAGTCGCATCGTTCCATCCCTGAT
GCTTCAGCACCACATCAGTTGTCACAACATTCCCTGCGGAAGAAGAAATGCAGAAATGAG
TCACCATGCTCAGCTCAACCCACTCATACACATCCCTGGAGGTTCATATCATTTCCTAAT
AACAGGACTGAGCACATATAGCGTAAGAACAGAGCACACAGCAAGAGGCAACCTCCACAG
CGAATCCCCCAAACCACAAGTGGTTCCTAACTCATGATCACGCTTGCCTTCAACTGGCGT
CTCTGAATTTCGAAGCAAGGTTTTTCAGAATCTCAGCGCTCGCGTCCACATTTCAGCGCC
GCGTGTCACTGTCACTCCAAGCCGCTTCCCCTTCCCCCACTCGCCATCAGCACGCAGCAG
GCCAGCAGCACGGCACGGCACTATCGACTACCCGCCCGGA