Contig Data
morexGenes
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Map Locations of contig_125097 (2421 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_125097

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_2825 1 458 bp MLOC_2825.1 Available Available LOC_Os03g60790.1, FRAME:-2, EVALUE:1e-29, 13103.m06678 protein heat shock protein DnaJ, putative, expressed





CDS Structure of MLOC_2825






Contig Sequence (2421 bp)

>contig_125097 2421 assembly3_WGSMorex_rbca.fasta
AGGACGAAATATGCCCTAACAAACATACATATAATCCCTTTCATGCCTTTCTTCTGTAGT
ACTGTAGTTGCACACATGAACTCTGCTTTCTCTACTATAGGTCTGACACTTTGATAGATT
TGAACTGTGCTTCGACTCCTCCAAGCTTGGAATAGCTAATGACATGAGGTAAATGTACTT
CTTCAATACAACATCCAGAGTACATTATCTGCATCAATTAAACATCATAAACAAAAATCC
CCAAATTTGCACCATCCCCTAACCGACCAGTCCAAACCCTATCACAACATCAAGATTTTT
TCATGCTAAAAGCTCAAAATGAATAGATCATAGAAATGTTGTACTAAAGGACCACAACAT
CACATGATTTGGAGCTCAATATCCCTATATTTAAACCCTTCCAAAACCCAGTCCAAACCC
AAGCGCAGAACCCTGATTTTTGACATGCTACATGCTCGAAATCAATTGAATGTGGCAATG
TGACACCAAATATGGATGACATCAACATGACTTCAAGCAGAAAAGGGTGGATCATTGGGC
ACTTACCATATCTGGGCGACGGTTCGTTCTCCGGGCGACGAACAAGGGCCATCGGTTACT
AGTGTCGTTTTCAACCCACCTGCCCTCCGACCAACATGTGTTCCCCGAGCCTTCCTCCAT
ACGAAACATCTTGTCGCCAATCAGCAAGGCCATATGTGGTTCACCAAGTCCGCCATGGCC
TCCCTTCCTAACCCCTTGCCTCCTCGCCTCAACCGTGATGGAGATGAGAGAGAGAGAGAG
AGAAGCTAGGAAGATCTATAAAGAACTGTACACCGAGGCCGACTGAACTTTTATGCCCCC
CCCCCACACACACACACACATTCACTTTTGTCACGTTGTCGGTCAAGCGGTCAAACTCTA
TGGCAAGTAGGCGGAATAAGGAGCCAAACCGTACACGGTGACCTTCTGTGTTCATCGATT
TAACATTCGTGGCCATAACCCATGTATTCATAAGCTCAGTGATCGATGTCAATTCTGTGG
ACGAGCCGGTCCAGTGCACCCGTACTTGTGGTGCTACCAGTTCACCGACTACCATATAAT
CTTTTAAGATATCTGAAAAAAAGTCTAGCACGTCAACGCAACATCAATGTATGATGTCAC
AAAATGTTGTATAAAAACTTGAAATGTTGTTTGAGATACAAATTCGACATTAGTGTGATA
ATGGGTCAAATCTAAAGCACAAGCTATGTTATGTACTATTCAGTGTTAAATTTGTCATCT
TTGTTTTTCGAGTTATGTTTTGAATTTTGGCTTCAAATTTTGTGACAACCTACATTCATG
TTGTGTGAGTGTGCTAGTTTATTTTCAGATTTTTTTTGAACATTTGAAAGCACAATGAGA
GTTCGGTGCACCGGGTAGCACTACAAGCTCCGGCGCACCAAATATTTTCCCGAGTCCGGT
GACCTTAGGTGAACTTCACTCCCAACTAGTGCAATGGAGGCACACTTTCAATCTCCGCTT
TTTGATGATCGATGACAAAACCATCAAGTTTAACACGAGATAATTATGAAAAATTGTATC
AAAAAGAGACGGTTGACGTAAAAATTGAGCTCCTCCTATATGTGTGCATTGTCTAAGATT
TGCTTTCGAAATGCAAATGCACATACCATTACAAGTGTGGGAACATCCAAGTATATAACA
ACATCAGTAAGTGCACTATGTGAGAACGTATATAAGAATGGCTATCAGTAGAGAATACAC
AAACACTTGTTCCCACCCTTCAGGTTTCCACTCGAAGTCCAGGTCATCGTCCGAGTCCTG
ATAGTGATATGCTTCCATCTGTTCAATGATAACCGCTACAAAATGAGAACCGATGCGGTG
TCAGCAAAATGAACATTTTTCGATCAGTGGCACTTGTTTGTGTCTGAATAAGCATCTTAT
CTACCGGCAGATTCAAAGAAGGAAAACTGCAATGTGATCTCAAATCTGCAAGTATTTTCT
TGGCAGAAAACTGCAAGGTGATCGCAAATCCCATCTCACTGGCTTGAAGAAAATATATGT
AGCTTGTTGGATCAGAAGAGAAGAGAAGAGATGTCAGTACTCAGTACCGAGCCAATCGAA
CTCCTCTTCTTCCTCGGCGTGCTTGGGCCGGCTCTCGGAGTTCATCAGCGTGTTGTAGGC
GTGCTTGATCCTCACAAACTTCTGATGAGCATTCGCCTACAATGAAGCGGAAACTCTGTC
AGCAAAGTCTCCATTGGATCGAGTGGCAGCACTGAAGGTACTTCCATGGCCGAATCCTGC
TGCTTGGATGGGAAAGAAGAGGGAGGACCTCCTTGTTGACGTCCGGGTGGTACTTGAGCG
CCAGGCGCCGGTACGCGCGCTTGATCTCGGCCGGCGACGCCGACGGCGTCACGCCGAGCA
CCTCGTACGGTGACTCCCTCC