Contig Data
morexGenes
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Map Locations of contig_124931 (3527 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_124931

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_2804 1 350 bp MLOC_2804.1 Available Available None
MLOC_2803 1 411 bp MLOC_2803.1 Available Available None
MLOC_2802 3 990 bp MLOC_2802.1 Available Available LOC_Os03g10180.1, FRAME:+3, EVALUE:3e-25, 13103.m01134 protein expressed protein





CDS Structure of MLOC_2804






CDS Structure of MLOC_2803






CDS Structure of MLOC_2802






Contig Sequence (3527 bp)

>contig_124931 3527 assembly3_WGSMorex_rbca.fasta
AGCGGGGCCGAGGAGAGGCCCGCCTTGAGGGACCGCACCAGCTCTGGCTTCGCATCCAGG
GAGCGACGGAGCGATGGCGAGAGCGGGCCTGGGGAGAGGCTCGTCTTCGGAGACCGCACC
AGCTCCGAGTGAGGCAGCTCGACCAGGAGTTCTACAAGGATATCTTCCCGGGGGGTGAGC
CCACGTCGCCCGGCGGGTCCACCAGCCGCCTGCTGTCGCGGTCGAGGTATTTTGTTCTGT
TAGTGCTCTGCGGTGTTTTTTCATACTGAAGTGATGCGAACAATAGCGGTGCCCGTTGTT
GTTCTTATCAAGTTGTAGATATTGTCATGCTAAGAAATGTGAACTTGTCAACATTGCCAA
GTTTTCACTTATATATGCTTCTTGCAGCTTCTCCATGAAGTTCACCAGAGGTGTGGACAC
TTCAGTGCCTACTTCTCCATCTCGGCATACATCCAACAGAAATGATGATGACACATCTTA
TGGTTACAGTGTTCCAGTTTCACCGAATTCATCCACAAATAGTTCTTTTGCACAGGGGGT
ATCCCAGCAAGATTAAAAGAAGAATCCCTTTTCGTGGCATCGATATCCCTTCCTATCCCG
GTTCCGTTCAAGTGGAGATAAGAAGGAGAATGACACTTCTCAACGTGTTAACTCTATGGA
CAGTGAATGTGAAGGGACTCCTATTAGCTCACCAAGCTTCATCAGCAGTGACAAGTTCCA
TTTTTCATTCTATAAGTGGGCAGGGCAAGACAAAGAAGGAGCACGACGGCAGGGTGATTT
GAGGCTCGTGGTGGACCAGATCAAGCGAGGGGAAGGTCAGATTCATCGGCTGACGGTGTC
GGCAAGGGGTTCAACGGCGGCCAGAGGTAACTCGCAACTCTTCAGACTTTGATGGATAAC
AGGTCAGCATCCGATAGTGCTCCACTGTTTGCCGGAAGTTCGTCGGTGGGTTCTACACTT
GACGTACGTGGACAAGAAGGCTTCAAATCATGGTCTTTGATTCTCTGGTAACCTGTTGTT
CATTGCGTCAAATATCTTTGCAACCTCTCTTCCTTCCAACTTGCTTTGAGTGCTTGACTA
CATCTCAATTCGATCTGATCTATTTTTATTTTACTACTTGTCCCATTCTAATCTCTCTTT
GCATGTATTATTGGAACTAATTAACTTTGATGAGATAGCAATGTTTCTTACTGGAGAGAT
CCATGCATCTACAATGTACTTTTATAGTCGGCAGTTCCTAGAGCTAGCACAAAACATGGT
CAATGACCCTGAAGTACAAACATATTACTAACTAAAGTGCACTAGCGCAGGCAGCTAGAT
TTTAGAGGAGAACACATTTCAGTTCTTTTAACCAGTCTGCAGCCCATGAATACAACACAA
TTACACTTCTAAAAATTAGCCCCGGTCATGCTCGCTGCCACAAGCAATAGCACAACTGCG
GCAGTGGAACCATGGCTCGATGCCTGGGCTAGCGTGTGGTACGCCCTTCTTCACGTCCAG
CGTGGTCTTTGGTACACGCAGAACCATGGCTCGATGCCTGGGCTAGTGTGTGGTACGCCC
TTCTTCACGTCCAGCGTGGTCTTTGGTACACGCACAACGTGAATCGGCGCCGTGGTATTT
GCTAAAGCAAATCTAGAAGCTCCAGTTCCTGGAGGTGTTGGACACCCGTCATGCAATCGT
ATAGTCAATCTTTGGACTGATAAGCTATTGCCTTTCAAGTGTTGAAGTATTTTCCTTCGT
GGCTAGAATTATTCAATACAGTCAATGATGTTGCAAGATCTAATTTTTTTTATAACTTGA
TATAAGGGACATCAACCTTATAATTGAATTATTTCAAGTTTTAGAATTATTCAATGGTAT
TGTTCTTTCTTCAGTGTAGATGCATGATATTACATGATTAAACATGTCAATTTTATAACT
TGATTTAATTGTCTATATTATGCTCTATGTGCTATTACCAACAAAAATAGTACTTCCACT
GTCCCAATAATATAAGATGTTATTACATCCTATATGTATATTGGACGTAATAACATAAAT
AACACGTCATGTTTATTCCCCATCATTTAAGTGTGTGCCATTCTATATTTGTTCATGTTG
CTCATAGTACATTTTCAATATTTTCAAGATATGATTATGATGATGCTGCATACTGCTCCT
CTGGAGTCTACGTCTCTTTGGATTCTTGGACACTTATAGTCAATGAGACTACATTTTTGG
TTGTTAGCTGGAGCTATCACTATGACTGAAAATTTATTTCCACTCAAGTAAATTTATATC
CTCATTGAAAACCAACGACAGTCAACACTTATCAACAGTTTGCAATTTGTATTAGAATGT
GCCTAAGCCAATGGTTAGACAATCTTGGTCATGATTTATGTAGATTGGATAGTTCCTTCA
AACTGCGCTCTTCAATCTTGAGTGGACAATTATATGTTTCCTTATAATTTTTTTACTATA
TGTTTCATAAATTGACTGATTATTTTGTCTCTGTCAGATTAAACTAGGTCTAGATTTGAA
GGTACCATTTCAGGCAGGTGGTGCTGGTTTGTTTGTTGTACTAATGATGCTCTTTAGACA
CACATGTGGCCTTCCTCATTCCTCAGTCGTTATGAGTTGGGCATAGTTTTGCGACCCAAC
CAATCCTGGTTCATCGCAACATATGTTTTCTCCACACAAGTTTAAACAATGCAATCTCTT
CTTAGGCTATCAAAATATGAGCTTGATGAAGGTAGACAAATGATGATGTCCCTTACTTTC
TTGATTAATTAGGGAGATGACATTTTCTTCTCCCATTGCAACGCATGGGCATATGTCCTA
GTAGTTATAAAAGTGCACAATGTTCTTGTTTTACACTTTTATGTGTAGTAACTATCAAAA
ATAGAAGAGGAAACCTTGTTGGAGTCGAATTGAGACTTTCCTGAAATCTGTCTGAAAACT
CTTTTTAGCGATTGCCACGTTAAGGGTCGAAGAAGACCTCAAACGGAAATCTCACAGAAG
ACAAAAGTGCGGGGAATTTATTCTGATAAATCTAGACATAAAATTTGGCCCATTTGGAGA
TCGGACGCTCCAGCAAAGCCCGTTTTACTCGAGGCAAAATATCTTATTACGGGATTACGG
GAATCAGTGACGTGATTGAGTCCAAGTCTTACCATATTTGATGGATTCAGCCAAGCCACG
ACTTTAGGACCTCATTAGGTCTGTGAGGGACCTAGGAAGGTTCTAGAGGTGTCCAAGAGC
CCTTGGATCAAAGGGGCATCCATCGAAGGGCCAAGGATGATCGTCCTAGATCATATAAGG
AGAGGAAAAACCCTGATTTCTCGGCAGCCACCAAAAGCTACGAATTTTGCCTCCCCCATG
GCCCCATATCCACGGGGGAGGGCTCATCTATGGCACCAACAAGCCATGGAAGGAGGGGAC
TAAGGGTTGGCGCTCCCCCATGATGGCTGGCCGGCGCAGGAGGAGCCCCCTGCGTCGCCG
CCGGCCGCCCGCGCCGGCCCCCACCCCACCTTGTGGCCACGCCTTCA