Map Locations of contig_124640 (7937 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_124640

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_2768 1 671 bp MLOC_2768.1 Available Available None
MLOC_2769 6 2788 bp AK356874 Available Available None





CDS Structure of MLOC_2768






CDS Structure of MLOC_2769






Contig Sequence (7937 bp)

>contig_124640 7937 assembly3_WGSMorex_rbca.fasta
CAGGGACATGTTGCATGTTCTTCAGCTGGGACATGTTGCATGTTCTTCAGCTGCACGATC
CTGCATGTTCTTCAGCTGCACGATCCTTCATGTTCTTCAGCTGCACGATCCTTCATGAAG
TAAACTTCAGATCGACCCTGCCAACACCAAGAATAGAAGCACTCGCGCCATTCCTCATCA
ATACGGACCCATGACGTGTGACCTGGTAAGAAGAGAACACTGAGATGTCAGCACACGCAT
GAATATGCGCACCTGTGTCCACCCATCAATCGGTGGACTGACAAACTGAAAATACAGTAA
ATAAATTATCATACCCAGATGCACCAATTTCATTGTTTCCCACAATCATATTGGCAGACT
TGGAGTCTGACCCTGACTTCTTGTACTTGTTTGGGCACTTCGTGGCCTAATGTTCCTCAG
AACCACAATTGAAGCAACCATATCCTTTCTTGTTCTTCTTGAAGGTCTTCTTACCCTTTT
TCTTAAAGTTGATATTTTTTTGGACAAAATTATTTCCCTTGGGCTTGTGAGAGTTGAAGT
TCCTCTGATGTACCATATTGGTGACAGGAGTACTTTCAGCCCCTTTTCCATGCGAGTGTT
TTGCTCTCGAGTTTTGCTCAACACTCAGATGGATGATGTCATCCTTTATTGAGAATTCAC
GCCTCTGATGTTTCAGAGTGGTAGCAAAGTTCCTCTAGAAATTAGGGAGCTTAGCGATTA
TACACCCCGTGACAAATTTTCCCGATAAATTGCACTTAAGAACCCCAAACTCTTTAGCAA
TGCATATTATCTCATGAGACTGTTCCAACACAGAATGGTTATCAACCATTCTTTAATCAT
GGAACTGCTCCATAACATACATCTCGCTCCCAGCATCGATGGCTTCGAATTTAGATTCGA
GCGCCTCCCAAAAATCCTTGGCAACCCGCACATATAAATATGTGTCAACCAACTTATCTC
CGATCACGCTAAGAACTGCTTCGAAAAAGTAGACAACGGCGTCCCTGAACGCCTTCTCCT
GTTCGGGAGTGATCGTTCCTGTGGGAGTAACACCGGCTACCCATAACACATTCATAGCTG
TGATATATAAGGTGGTCTTGGTCTGTCAACGATAAAATATGTATTGGTAAACTTGTCCGA
TTTCAGTGCAACAGCAAAACCATTACTCGAAAAATTCCTACACATATTAGGTTTTTGGAT
TATTGCGTAAGTAGGTAATTTTTCAATTAAATTAATCCATAAAATAATCACTATCATGAC
ATTGGCTAGATTACTGACATACTGATTACGAAGGACACTAGCATGTACTACACATATAGT
AGAAACATCTACTCATATAGCTAGTATTGCTAAGACTGAAATAGACAGGAGCGGGGTAAA
CGAGTTATACCCTCCAATCGGCTAGTTGGTCGTAGCAGCACCAATGGCGGCGGTAGCATT
CTCGGTCGCCTTCTTGTCGGCTTCGACCTTATCGAGGGCGAGACGATCGGCGTCGGTTGG
TGGAGACATGGCGATGGCGAAGGCGACACAGACGTAGATGAAGCACATGAATGGAGGCGA
GCAGTCGCCTAGTCGCTCCCCAGAAACCTAATCGCCCCTCTCCCGTACAGGATCCAGAGA
GGCGGGGTTTCGGTGGCATGCTCTCCCACCGACTGTGTGCGTGGTGAACAAGATGGAGTC
GCCAGCGACAGCAACAACAAAAGGAACGACATGTGCGCGTGGAGCAGATGTGATCTAATC
TCGTGGCGGCTAGGGTTGGCCGAAGTCTCGCTTATGTAGGCACGTCTAGGTGCACAGACG
TGGGTTGCGCGTAGGTATGAGCTCGGCTCGGCTAAATTCCACAACCTGCGGCGTTTCGTG
ACGAGGAGTGGCATGGCAAGGCGGACGGCGATGGAGGAGTGTGCGGGGGCCTCTTTTCTT
CTCAAACTCCGATAGCATGTAGAAGAGAGACCCTTATAAGGAGGTCCAACTCCCTCTCCA
CTAGCAAGGTGGGACTAAAGTTCCCATCATCCCTTGTCATGCCACCTATATGGACAACTC
CAATAGGTGATGTAAACTAGAGATGCAAAACCGGCCGTCCACCGCGTGACCGTTGAAGTA
GTTGCGCATCAACATCTTATGCACATCCACCCGTTCTCTTCGAATGAACGCACGACCATA
GGCGGAACCACCGTGATTTCACTTCTTCCCAGTGCGCATTTCCACTAGCATTGCAATGCC
CTCTTCTTCGTTTAAATCAAATTCCTCATCCGACGAGGAATCGTCCATGAAAGAGGAGTC
ACGCGAGCTCATCTACAATGCGGATAATCACCGTTAAACTACTTTCCATCCCCAACAAAA
AAAAAACCTCAAGCTTCATCGAATTTTTACCTTCGGGAATTCCGTCGAACACCTTACTTA
CAAGGTGTACAAAATTGGCCGACTACAGGTTGGGCAGCCGTTGGCGGTAGCGGTTGCGGG
AGGCAATGACTACACAACAAAAGAGACGGCTCGTCCGGAGCTCCGCGCGGCAAGCGGGCG
GCTTCACACGGTCGGAAGAACGTTCGAGGCTCGCGACCGTTGGGCGGGCGGAGTGCCGCT
CCTCCACTAACTCAGGCGAGGGTTCTAGGCTTGGATGAAGCTTACCCCATCATAGACCTT
GCCGGGGAAGGCGTTTAGACCAGCCATAGCCGCGGAAGAAGCTTCGATTTGTCAGCGGCC
GAAACTGAATCGGCGGCTCCCGACAGCACGCCAGCGACGGGGGAGGGGGGCGATGTCGTG
GCAGGCCCGGTGGCCATCAGAGCGACATCGTTGATTTGAAGTGCATTTGGCCGTTGACGG
AGTCGGGCAAAGGCGGTCGGTCGCATGGAGGGGAAGGAAAGTGGTGGTTGAATAGTTAGC
AGGCGAAGGCAAATTTACATCTCGTGGAGTTGGAGATGCAAATTTGCACAGCAAAGTGCT
ATAGGATATATCTCCGAAAAGTGAAGATGTAATTTTTTATTTTGCATCTACATCATCTGT
TGGAGCAACGTTTTTGGGCCTCGAATATGCAAAAGATAGCCTATTTTTGCATCTACATGT
TCTATTGGAGATGCTCTTAAACACCAATGATATATACTACTCTCACATATGAAGTTCAAT
TGGACACGCCACATTTCTTCCTGTCCCCACGTTTCGGCTAATCTTATCTTACATCATCTA
GAACATAACTTACTTGATGTAGTATATACAGTATACACTGTTCTAAGTCCCTTGCATGAC
GAAGCCAGGAACGACATCGAGGAGGGTGCTTGATGGAAATGATCGATGCGCACAAACATC
ATAAGATGAAATTGGATGGTGCAGAAAGCCCGTGCAGTGCTTTTAGATGCGTGCAACCGT
AAGGTGTCTCACAGATCCACAGTTTATGTAGGCCACTAGCTTGAATGTTCCCCTTGCATC
AATGCCATTGTGGTGTCGAGGCCCTGCATTGTGAAATTGGATGGGTGAGATAACCTGAGT
TATATCTTATAGACGGTAAAAGAGCATAGTGTTTAAGTAGCTTGTGCTGACAAAAGGTGG
CTTTTTCAGAGTTCATGATGAGTATAACACCAAGATAACAAATAAAAGTGTTCATGATGA
GCAGCTTACTTTGGCTTTCTTCCACCAACTGATGAGCCTCTGGTGGTTGGCTTGCTCTCT
GTTCTGGACGGACGACGCGGTGGAGGCGGCGGCGTCGGTGGCTGCGAAATCGAGTGGATA
AAATGTCAGCGTGTATTCTGGAGGTAGAAAGATGCACATCATAGTACGAATAAATGGATA
TCTGGGAAGTGCCAATATGGTTATGGTCCAGTGTGCTGACGAAAGAATGGCGTACGTTTG
GTGCCTTAGGCTTGGAGTTTCCTGTCTGCAAAGGAGTTGTTTTCTTCGATGCGGATGCTC
GAGATTGCACTGTCGCCGGAATGCCCTACACAAAGGATCATTATGATCGTTAGCAGGTCC
ATTTTAATTGCTAAGGCCAGTACCTTCATGGCCCCATTCCAGTAATAATTATCCCCAGAA
GCAGAAGGAATAGTTCCAGAGATTGTGGTAAGTGGTAGTCAACAACACGATAATAACCTA
TTTGAATCATAAAGTTTAGTTGCTAAGTTCAGGTACTACACAGAACTGACTGATACTCTG
TTTTTATGTGCCAACTGGAAGCAAGCTCCGGACCGGACTACTAGGGTTCATGAGCAGGAG
GCAGACCAGGCCTGGTGTACCAGTAGTTACTCATATACTAATTACTTGTAATAACTAGTT
TTTGAATCTGCCAGCATTGTTATTTATCACAGGATTCACAGCTCACGATCATCAAATAAC
ATTAATCATGAAGAAAGTATCGGGTCAGCCTATGTGCATTGTATGATGCAAAATCGAGGA
GAGTGATCTCTTCCTTTTTCTTTTTCATTTTTGCAACTTACCTCTTTCTTTTTCAGCCTT
GCAAAAGTTGCTTCTCCAACACTGGAACTCAGCATTCTCCTTGCTGGAAGGTTTACCGAG
CTACACAATGAGAAGTTATTGTCAGGAAAAAAGGGTCAAGCACTCAATCCTGTCTTGCTA
TCCCTGGTAAGACAATCAAATTTCAAAGCTTCGTAACACATTCTAACACGAGTGTTTAAA
ATTAGCACCTTGATTTCTGTTTCCCGGCCACTTGCAAGTCCATTCTTTTTGGCCTAGTTA
AGTGACTGTCAAATGTTGAAGGACCTCTAGATTCTCTGATATTGCTGTTCGTTGAGAGAG
TGAAAACAATTCAATTGAAAAACAGACCACAAAGGCAAATCTTCAGAGAACACGTCAACG
TGATGTCATGCTGACAGGACTAACCTTTTTGGCTCCAGCTTGGTACTTTTAGTCGCATTC
GGAAGGGCGGCCTTTTTCAGAGTGCTCTGCATGAAGAAGCAAACCATAAGAGATCTAACA
CCATTATGCTTCCAATGTAAAACATAAGCATAAACCGACACGGCCGCATGAATATCCATA
CATTACAATTATCAGTAGAATGATAATTTTGGTAGTATTGTGGTGAGAGAAGAGGATGGA
ACATACCACAGTAGTTGTTGAAACCTTCGGATGTGCCACACTCGATCCGGTCTTGCTATC
CCTGGTAATACCACGTCTTTCTCCTGTAGAGGGCCGGCGTGTACTCGCAATATCAGAATG
TTTTGCTGCACTTCCTCTGTCAACAGGGCGTCTTTCAGAGGTAGAAGGCCGGCATGGTGT
GGCAACAGAAGCTTGCTTCTGTGCACGCTCTCTGGTGACAGGGCGTCTTTCGGCAGTGGA
AGGGCGTCCTGTGGTGGAGACAACAGCGGGCTTCTTAACGATTGCCCTGGTGGTGATGGG
TTGCCGCTCTCCGATAGAAGTGACGCGCCCGGCTGCTGACGAAGGTCTTTTGACACCTGT
AAGCCCGAGAGCTTCTTTTTCTGTACTCCTGCGAGTCCGCACTGCCCCGACCATCTTCTG
CGATGCCACACTTGAGCTACGGACACTGTTTGTCTTGGTCTTCTGGTTTGTTGTCACGCT
AGGCTTCACTGAACCAGGCGTCTGAAATGATTCAGGCAAAATGTGTTATGACTTATGACT
TGACCAAAACATTCAGGCTCTTGCGCCGTATAAACAGGAAATATGTGCTCATGCAACTAG
CTGGAAGCAGGAGGGTGAGTACATGAAAGTGAAACTGTGCATTAAAAAAAAAGAGGATCC
ACAATAAAGCGCCATATCATCGGTCTACAAGGTCAGACAAGTAGTACTGTCGTAGTAAAC
GGCAGCAGAGGTTTTCACAAGATAAAAGCAGCAGTGATTCAGAATTCAGAGGGTGATGTA
CCAAAACTTGGCGTGTTATTTACCTTAGTGACAGATGTGCGGTCCAGAGGACTGCCCGCG
ACGGTTTTCACCGATTTTGGTATTATCATTGAGGCATATCTAAGTCTGGGGTCTTTCTCA
GCATTTCTTCTAGGAGCCCTTGCATTTTCATAAGCTGCTCCAATACCGTCAGGACCAAAA
CCTGCATTTTCAACATCCGCGGAATCTGAATTACCACCAAGAGCATTTTCTCTAGCATTC
TGGTCGGTTTGCTGTGAAATTCTGCCTTCTGGAACAGGATCGGATGATGAAAGTTCTTTA
CGGAAGTCCTCATCTTCATGGTCATGATAGCATTGCATGTCCTGTTCAGAGGTGGTCTCA
TGTGCAGCTTCTTCCACATAATCGTAAACAATTGTTCCAGATCCTGTGGGAGTTTCAAGC
TCTTCGTGGGGCATATCTTCTGTTTGGCTAGAATCACTGCCATCACCACTGTATTCCAAG
GTGAGTTCAGTTTGCTGAATTTGCTGCTGTGAAGCCTTGAGTTCCCTGATCTTCTTGTAG
TACTCTTCAAAATATGCCTTCTTCTGAGCTACTAAACCATTGAACTTAACAAACTCTTCA
TGGCGTTTGTCATTAGTAAATACAGACCACTTCTCCCAAGACAGTGACTCCAATTCAAAC
CTTCCGAAGGATACGGAACCATGATTGAGCGTCTGCGATACAGAAACTCCCTCAGGAAAG
TAGAAAAACAACATAGAGAAGCAAGTGAATCTACTAGCTGCGGCAACTCTTTCGAGGAAC
AGAGCTGGCATGTTATTTTATATTTCAGAATAAAAGCACCATTTCTAGTTCATTCGCATA
GTATACATAATTAAAATTACGCGGGTTATGAACATCTTATAGGAAACTTACTTGAGAAAC
ACCAAGGTCAGTTGTTTCTCCTTGCGACCATGCAAAAAAGGTTTGATTGACCTCAGTCCC
CATCGATTATTTTCCGGCTAATTCATCATAGCTGGGTAGAGTTTTGTTTGTAAACCCTGC
AAAAGTTAAATTCGTTATCATTAAATCATGATCATTGAACTGAAATCTGTCCCAATATGC
CAACAACCAACAAGATGAATAACAAAGTTGTCTAGACGTGGACGTTTGCTACAAGGAAAA
GATTGCAAACTAAGATCAAGAACATACAAAGTTCATCTAACACCGCGAACAAGAACACAT
GGAACAGGTGTTCAGAAACATTTTGCAACTCAAGTAATAAGAACTCAAAACCAAGCTTAT
TCCAACGGAAGAAGAAAAAGACACGTGGTGTTACTTTCTGAAGAGGCCAGAATCCAAGAT
AAGTGGTGGCTTGGAATGGAGAATTTCCATCAGTGGAAGCTAACCAAGCAGTAGTAGTAA
ATTAATTCAGCAAGTCAAATTATGCTCGAAGCATCCGCCTTTAGCGCATGTTCCAACACC
AATCCTTTCCTTTCGGGTCAAGATTCCGCACAAAAATAAAAATTCCCACCTTCCAAGCTG
CAGTTGAATCGCTCGACCCAGAAGCATATGGAGGCAGAGACGCCACTTCTCTTCTCAACA
ACCCAGCTCGTGCCATTATTCGCTCACATCACATGCCAACCACCTAAACCAGTTGCAGCC
CAAGGCATACCAGGATGCAGTTGCAGAGGCCAAGTGAAAAAACTAAGATATGGAAATCTC
TTGTGATTCTGAGAATTCAGAGAAAGGCCAACTCGGATCTGTCCATGAAGCAGATTCCCG
CCCGAGAAAATGATTTTTTTCGAAAAGTCGGAGCGAAGGGGAAAAGGCCCACGAATTGCA
ACTGCAAAACTCCGCGCGCAATTTATGGCCTATGGGAACAGTAGAGAGGCTTGAAGAAAG
GAAATACAGTACTTATTAGAGTTGAAGAACATAATTGCCGTTTGGCGGAATAGAAAAAGG
GAAATTACTTCAACTTACCATAAAATGAGTGGGAAACGAAAGAGTAGTACTAAAATTCAA
CTGGAAAGTGAAGGCCAAAAGATAGAGGAACCGAGGGAAAAAAAATCATCACTTTTGAAG
AGCGGCACTGAAAAGAGGAGTGGACTTTGTGAGGAACACAAGAACCGGATCGAACCACCG
CCGCGTGTCCCCCCCCC