Contig Data
morexGenes
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Map Locations of contig_123399 (4174 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_123399

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_2619 1 1310 bp MLOC_2619.1 Available Available LOC_Os02g04490.1, FRAME:+2, EVALUE:5e-28, 13102.m00470 protein histone acetyltransferase HAC1, putative, expressed





CDS Structure of MLOC_2619






Contig Sequence (4174 bp)

>contig_123399 4174 assembly3_WGSMorex_rbca.fasta
AGAATCAATTCGGTCACAACAAGAGGCTTCAGTTGGAATCTCCCCTTCGCACCAACCAGC
TCTAATTCAACCTGTTGGTCATCATCAGGGACTGGCAAGTCGTAAGTCAAGCAGAGCGAG
AAGGGGGAATAAAATAGGGAGAGAAGAGGAGTTGTCCGGCTCACCGGGACAGCTTGATCG
AGAGGGTGGTTGTAGCGGCAGCAATCCCCATAGCCGCAGGCCCCCGTGGAGAGGTAGTAG
ACGTAGTTGGCCGTAGGGGAGCAGTGACAAGGGACGACGCGCCAGGGAAGCAGGGTTGCA
GGGGATCGGAGTATTGACGAGGGACGACGCTCCGGGATGGAGGGTCGCAGGGGTGTGGTG
AGGGGCGGCGTCCCAGGACGGATGATTGCAGGGGAGGGTGTGCGACGACGCTTCGGGGTG
TAGATCGGTCGAGGGGCAGCGGGAGGCGGCTGACGACCGGCGGCTGGCGTGGGAGCTATA
CGATCGAGTAGAATAGGGTAGACTGGGGACAGGGAATGACCTAGATTAATCGTAAAGCCA
ACTTGGGCCGGGCTATATAAAAGACTGAGTTAGTGCATTGGGCTTTATTTGGTTGTAATC
ATATATAGTGCAACGCATATGCTATCTTGCTTATATCCGTATCTATTGTGAAATTTGCAA
CAAACGGTTAAAACGTTGTAGGATATGTGTTGCTTTATAGGGGGTATCCTTGTAGTGAAC
AATTCTCCACCACGGGTGCCACCTGCCACATCGATCGAGATGCTTCATGATCTGTCCACC
ACACCTTGTCCCCATCACTCCTTCACCGATGGATCCGTAGTCGCTAGTGTCGCCATGTTT
GTGAGGGATAGGAGAGGGAGAGATAGCGAGGGAGGGGAGTGACAGAGGAGTGATGCGCTT
GCGTTGGGCCGACCTAGTCACTTCGGACAGAGCCGTTAACGGTGCACCCTCACCGCCGTC
GGACCGCGAGGACCAACCATGTCAAAGATATGCTCAAAAATGGCTTAGTATTTTTTGCCA
CTATCAAATTTTCGGTTCAAAATGTCACTTTTTGTAAAGTCGTGTTTTTTCGCAAGTCGT
GACACAAAAGTGATGTTTCTGTTCATTTAATCCGGTGTCTCATGCTACCATCTACAAAAA
TAACGTCACCCTCTAAAAAATAAACAAGATGGAAAAGTTTGCGGGACATGAGGGTAAGGG
TTTGTGTGCGTGATTGGGCCTACCTATCGCCGCATGGTGACCAAAGGCAACAGGGCGATG
ATTTTTGTCAAGATCCAATGGTCAACCCTACCCGGTGATGTCGTGACGTGAGAAGATAAC
GATGTACTCGAACGCCGCTTCGCGATGAGTGTGACGCCCCCCTTGCTAGAGACGACGACA
AAAAGCTATCCGGATAAGGGAAGTTTGGTGTGAGTGGGCCCATTTATCGGTGTTTATTAT
GTGCTTGTAATGAAAAAGGAAGGGATGCTAAATAAAAACGTTTGTGAACACCTTGCCTCT
TCCCTGCGTTCCCATCCTGCTCAACGTCTCTTCTCACCCAAATTCTCCAGTTCCCGATCG
AAATCAACGTGGATTCGATCGATCTCATCGTACACCATACACTACAAGTGCCCAAACTTG
CTCTTCTAGAAACCTTCGCCACACCAGCCGGCCTCACGTTTTGATTGCGGCTAGCTGCAA
AGGTGAGCGAGGGGCAGGAGGCCGGCTTAGATGAATCGGTTAGTCGGCAGTGGCATTGGC
AGCGCAGACGTGCCACCGCCGCAGCATCAGCAGATGGAGGATGTGATGGGCCTCAGCGAT
CCCATGCTACTGGAGCTGCGCAACAATTACCGCCAGAGGATGTACGTGCTTTACTGCTTC
TATCTCCGTAGAAATTTATGTAGGATGTAGTGGTGTTCACTAGTTCATCAATCCGTGATT
TCAAGTGTATATATAATTATATATATGCTCTAAATAGTGGAGTAGTAGAATCAAGTTTGA
CACAGCACTGAGGTTTACAACAAGGAGTACTATTTATTTCCTTGTTCTTGAATTGTCAGA
ATTGAGTATGCAAGAAAGGCGGTAATTGCCAGATTAGATGCACGATCGAGGACACCAGCT
GACTGGCAGCGGCGGCTGCCTGAACTTGCTTGGCGGGTCGAGAAAGTCTTGTTTGAGAAA
CACCCCAATAAGGTGCGCGATGTTTACTTATTCTTTTATAGCCCTGGTCCATGTCCATCT
CAAAGGCTACAAGTAAATCGTTGTCTCATCATTTTTCGTGATGACACCTCCTGTTGTTTC
TGCAGAGGGAGTACTACAACATGACGAATGGACCAGTTCAGACACATTTTGAGTTTGCTG
TCACAGCCGCGCTTGCTCAGATTCAGAGGCAAGAACATGGACGAAACCAGCAAATGTCAA
GGCAGAGAGCATCTCCCACAGCCTATGCTCCTGGGGGCATGATCCCGGCACCTGGTGTCA
CGCAAGGTGCTTGCAAATCGTTGAATACTTTTTTTGACAGACAACATCTGGTGCAATCTT
GGTTCTCCATCCATAGTGCCAGCACCCGTACCTTGCTGCAAATTGCATATAATGTTTTAC
TGAGATTCTGCAGTTAGCTTAAAGATATAAGTAAAATTTTATCCTTAAAGATCCGTCATC
AGAAATTAGCTGTACATATCTTCCTTCCGATTCTTAATTTCCCTTTTGCTTGGCATAACT
TATGAACCAGAACTGAGATATCAAAATGTTCATTGCCAGTGACCATGTAGTATATGCTAT
TCAGTGTTAGAGTTTTATGCTAGCTAGCTAGTGTGCCCTGTAAATCATGCTTCCAATTTA
TTAGCTTAGTTTGTGTTGCTTTCTTTCCAGGGGAAGCCCCCAACGAGCATGTGAACACGG
TACTATCTCTGGGAATAAACTCTAGTGATGCTCACTCGGAAGTGTCCAACAGCCTCTTGG
TAAGATACTAAGAACTGTACACTGCACTTCAGCAGTATCATGTTACAATAGTTTTATCAG
CTCATCACTGCTACCCGTGGCAACGCAGGCAGTCTGTGCACCTGTTAATAAGGAGGTCTC
AAAGGAACCAAAGTTCAGCTGTCCATTCTGCTTCGACGAGCTGGTCGATGCGTCATCGAC
TAACTGCGGCCACATCTTCTGCCTGGAATGCATCAAGACCTCCATCCAGGCTCAGAATAG
GTGCCCTGCCTGCTGGAGGGCACTCACCATGAACAGCTTCCACCGGGTCTACCTCCCTGC
TACGATGGACTAAATTGATTCTATCTGAAGTATAATTCACAGGGTTATCGTTACCATATC
CAACTTTGTACCCGGGAGGCGTGTTACCGACCGAGCCTTTCTCGTTTGCATCCATCGCTT
CTAAATAAACTGTAGTCGATCTATTCCTGTGGGAAATCGAAACCTGTGCTTGCTACCGTT
AAAACATATTGTCTGATCATTAAGGTATATGTGGTTGTTTGCATGCTTTACAGTATGGCA
TGACATATATTTGAAGATTTGGTCTTGCGTTGTCACCGTTTTCTTTTAGTATCAGAAGTC
ACAACCTTATTAATTGGTAAGTGTTCTGGCGGTACAATCGCTAAGTGACATTGGGCGATG
AGCAACTCCTTAGCGAGCACTTCTTCGGGAGCCTTCCAGCGATCACCCTCGCGTGCCCCA
CTTGGCGCATTCTCAGCCGTCGTCACGTGTCGCATTCGTTTCCTTCGTATTTTGCTTTTT
TTTTTTTCGCACATGTTTTCCGCTTTTTGGAGTGGTTTTTTCGGTTTTTTGGTGTTCCGG
TTTTCACAGGTCTTTCGTAACTTTTGGACCTAAAGAAATTTTATTTTTTTTTATGAAAAA
AACCGTGTTTTTTTTACGGAAAAACACGTTTTCTATTTTTTTGCGAGAGGTACGGTTTTG
CCTTCGCTTTTGAAAAGAGAAAAAACGTGTTTTATGTTTTTTTGGCGAAAGGCACGGTTT
TGCTTCGCAGAAAGTCACGGTTTTGAATTCGTGAGAGACACGTCCGTGCCTCTCGAAAAC
GGGGAAAAACGCGTTTTTTGTTTTTCTTTTTTCGCGAGAGGCACGGTTTTGCTTACGTGA
AATGCACGGTTTTGCTTTCGCGATAGGCACGCCTGTGCCTCTTCCGAAAAGGAAAAAACG
TGTTTTCTGCTTTTTTTTTCGTGAGAGGCACGGT