Contig Data
morexGenes
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Map Locations of contig_123085 (3888 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_123085

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_2582 1 450 bp None Available Available None
MLOC_2581 1 667 bp None Available Available None





CDS Structure of MLOC_2582






CDS Structure of MLOC_2581






Contig Sequence (3888 bp)

>contig_123085 3888 assembly3_WGSMorex_rbca.fasta
CCAACGCAAGCTCAAGAGGCAACATGCGCCTCCACTTAAGTGACATGGCGAGGCAGGGCC
GGCCTCTGGGTCACCGACGTGCGGGGCCTGCATTGATCCTCTCTCTCCTCCTCGCCTCGT
CTTCTTCCTCCTCCCGACATAAGAAGCAGAGGAGGCCAGGCAGGGCACTACCGGCGAAGG
GAGCCGCTGCTCCGGCGAGCTTCTCCGCCCGGCGAGGGGACCGACGGGCACGCCGACGAG
CGCCACGTCTAGTGGAGGTCTCGGGCACTGCTGGGGAAGGCCAAGGGGGGGTGGATTTGG
GGCTGAGGAGATCACTGACGATTCGGGCACTTCGGCGAACATTGGCTCGGACTGGGGCTT
GGGAAGAGGCCAGGGGGAAGGAGAGGCTCCGGGGATGCCCGGGGAGAGGCTCGGCCACGA
CTTTTATAGCCGGCCGAGGACGACGGATAAGGACGCCGACGTGGCGATCCTAGCCGGGCA
CTGGAGCAAGGAGAGGCCGGGGCTGGACGCTTGCGGCCTTGAGAAGCTTCACAGAGGAGC
GGAGAGGGCTCAAGCGAGCTCGGGAAGGCTCGGAAGAGCTCGGGGGAAGAAGACGACATG
GCGGTCATGGGCAGAACATGGGGGAGCTTGTCATAGCGCGGCAAGGAAGAATCTGGAGGG
GGAGGGGGCTCGAGGGAGAAGAGGACGACGAGGGGAAGTTGATGGACACGACGAGGCGCA
CAGAAACGACGAGGAGAGGAGGGGCCTGAGCTAGCAAACACGCAACTCGCATCCATGGCA
TGCCAGTGCGGTGGTCACCGCATGAACTCGGTGATGCCACGTACTCTGGTCGTCCAAACC
ATGTCTGGTCGACTGGTCATTCATCAGATAGGGACAGGAAGGAAAGAAATGAGCACAGGG
ATGCAGGAATTGACTAGAGAGAGGTGGGAGACAAGGTAACAACAATGTGTTTGATGCTTG
CTGAGGAAGACTGGTCTGGTGATTGACTCTGATCTTTGTCTTATAGGTATCACAGCCTAA
GATGATCACTACTGAAGATTTTCAGATCATTTAGATGGGTAAAAGTGGCACTTGCTGTAG
AATAGACCCTACTGGCCAGAAATGCAAAGTATGAAGTGGCACTCACATACTTGCTTGGAT
GGAGCTGAATTTTGGAGGAAATGGGTTATTTAGGCATAGGAAGACACTGTATAAATTTCA
TACCATCTGCATAAACCAAAGTGGTACTTCCTTCACACAGTATCCCTACTGGACAAAATC
TTAGGAGAATTACTCGAGAAAAATGTCTAGATAAAATGAGCAAAATCCAGGCCAAAATCA
AAAGAAAAAGAAATGGGCAAAATCCAGGGTGTTACAATACACTCTACCAAAGATTAAACT
ATTTGTTTAGGGACGCACTAAAAATGTAGTAAAATACATTTATGGAGAATTAAAACTTAT
AATCAATATGTTCACACATACATGTTATGCAAGTTCATATATCAAAGCACATGGAGTTCA
AAGAAGAAAAAAAGAAAGTACAACATAAAAAAAATCATCACGAGCTTCATGTGTAAAAGA
TACATAAGGTTTAGAGAGGTTCACACCTAAAGGTTTTGTAAGCTGGGAGAAAGTCAAAGC
ACTACCAACATTAAAAAGACTTGGATTAAAAGAATTTACATGAGTAGGTTTTGTAAAAAC
CATTTAAAAGGACAAAAAATCCATTGCTTTTTTAGGTAGTTCATGAAAATTAAACATGCA
AATTCGGAGGTAATGACACTGTCAGTTAGGATGGAAATATCAAGTATAAATAAATAAAAA
TGTAAACAATACAAAAACATCAAAATCTAAAATTTTGATCATGGAATTGTTTAAGTCGCA
AACAAATTGAAGTTTTTGTATTTCCTCGGTTCAAAGAAAACAATTTCATGATCAAAATTG
TGAGTTCAAATAAAACTTAAAAAGAACAAACATAGCATTTTCTCTATAGAAAAATAGTTA
GTTTAACTAAAAACAATACATATTCAATCACACAAATTTTATAGACCACTTATTCAAATA
TTATAGACCACTACTTAATTCCATATAATTTTCACGAAGCAAGACTAAATTTATCACTCT
TCATATGGCTTATATGAGTGAAAAACCTTGCCTCTACACCATTTGTGATTCGGTCACATT
ATTCGCTAAAAACAGAATCCTATCTCAGCTAATTAGAACCCATTTGTTCATTATTATGGA
TGGCTGGAGGCTGGTATATGCACATCTTGCACTTGCACCCCTTAGCAACACATTCACCAG
ATTTGAATTGCCTTGTACGTTTGAAGCATGCCTCTTCACAAGCATGGGTATTACATGTTG
GAGACGGGAAAATTTTCTCCACGCATACGAATTCATTAATGCTAGGATCTCTTGATGCCT
CCACTACCACATCTGCAAGATCTCACGATGAAGAAAGGGGATGATCACGACATGGCCATT
TATTTGTTGGGAGAGATTATGCATAGACGTATTACATGGACAAATGAGTACCTGATGCTA
GCACGAGTAATACGAGGGACAAAAGCAACACATGTGTAGTTCTCATTTGAACCGTTTGTT
TGTGCTGAAGGAACAAGTCGTTGATCTTGGTGTGATATGGAAGTTCGGACGAGAAGAAAA
GAAATGTGCAAGTGTTTTTATAGTGGATCTATCACAATTAAACTAGAGATTTGGTGAGAT
TCCCAAATTAATATCCACCAAATTAATTGCTATATATTTATTTGATTATTAATATGTACA
AATTAATGTTCATCAAGTGAAGATATGTACATATATATTCTATTTATTTCGCTCACGGAT
GAGCATCCAAACCACGAGTGATCATGTACATGGAAATGCACATAATTTATTGTACATATT
GAATAAAAATATTCTGCATTAATTTCTTTAACATTATATCAATGTGTACATGTAATCTAA
AATACCATACCAAATAACAATATCTCCTAATTGAAATTGTTGCTTCACACTAGGAATGAC
AAAGGAAACAAATCGCCCTTATTCACCGTCTACATGCAAGTCACATCTTAGTTAATATAG
ACAGTGCAAAAAACATTGGTCAAGCACATAAAATTTAGAGTATACATCTACAGTTTCCTC
TTTGAAACCAGCAAAATCTTTATTTGAATCCGCATCACCATCAACTAATGACACATAGTT
CTAGTGCCTTACCAAATCATGTCGTGAAGCAAATCAAACTTACTAGGATTTTATTGTCCG
ACAATGGATACTCTCAGGGCTCACTCGATATTATGGTATCATCATGGATTGACCAGACAC
ATCTGATGGATATCACAAGAATACTGAAATACTAGCCAAACACATGTGATGGATATCACA
CGAGATTACCATTAATAGGATCATGGTTCGATCACCCATCTACGGATATATTTATGTGTA
GTGAATTGATTATGCAAGTACAATGTTTCATTTCATTGCAAAAAGGTACAATATTCCATT
CATGAAATCCTTAAGTATGCATTGATACGTCTGCGCCGTATCTATAATTTTTGATTGTTT
AATGCCAATATTTACAACTTTCATATACTTTTGGCAACATTTTATATTAGTTTTTAGACT
AACTTACTTGTCCAGTGTCGAGTGTCAGTTCCTGTTTTTTGTGTGTTTTTTGTTTCGCAG
AAATTTCATATGAAATGAAGTCCGAACGCGGTAAAAATCTATGGATATTTTTTGGAATAT
ATGTGNNNNTTGGAAAGAAGAATCAACGCAACACGATGCCCGAGGGAGGCACAAGTTAAC
AAGGCACGCCCACCCCCTAGTCGCGCCCTATTAGCTTGTGCCATTCCCTTAAGTTAGTTG
GGGCCCTACTTTTGCCCCAAGTAAGATAATTTTCCGATAAAAATCCCC