Contig Data
morexGenes
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Map Locations of contig_122663 (4147 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_122663

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_2539 1 1209 bp MLOC_2539.1 Available Available LOC_Os08g13920.1, FRAME:+3, EVALUE:9e-114, 13108.m01491 protein glycosyl hydrolases family 16, putative, expressed





CDS Structure of MLOC_2539






Contig Sequence (4147 bp)

>contig_122663 4147 assembly3_WGSMorex_rbca.fasta
CCGCGCCGCCCCGACCACGTCCGCCTCCACTCTGGCCGCCTCCGTCCTGCCCTGGCCCCG
GCCCATCAGCCTCCTTTCCAGCTGCTTTCGCCTCTGCTCTGGCCTCCGCCCGCCCCCGCC
CGCACAATACGTCGCCGCCCGTCCTTGCCCGCACCGCACCCGCCGCCCCATACTGCCCGC
TTCCGCCCCGCGCCGCACGCCACCGACCGCTCCCCGCTCGGCTGCCGCCCCAACTCGCTC
CCCGTTTGCCCGTCACCCGCTTCCCGATGGCGCCGAAGAAGACGCCGAAGGGCAAGTTAG
GTTTCTTCGACGTGAGGGTGAAGCCCTCCGGGAACTTCGGAGTGGAGTTATCCGACGATG
CGCCGCGTTGGTGGCTCTAGACGTATCCCACCGTCGATGAGGCCGCGCATGCCTATGACG
TGGCGGTGTGGCGTGCCGGACGACCGAAGACGGTCCTCAAATTCCCGGAGGTCGAGACCC
GTGCAGTGGCGGAATGGCTCATGCCGCAGGGCATCCGGATGGAGTAAATGCCAGCGAAGA
AGGCGAAGAAGAGATCGGCGGTTGTCGTCACTCCCAACGAGCTGGAGCATTACTGGAAGT
GTGACGTCGAGGCGGAAAAGAAGGGGGTGCAGAAGGAGGACGAGGACGGCCCCTCAACTG
TGATCCCTATCAAGTCATCGGATGAGGACTAGGGTGGCTCTGACGAGGAGGACGAGGGGT
GCGAAGACCCGGACAAGGACGAGTTCTGGAAGAAGTTTGTAGCTCCGACGATGAGGAGTA
GTTTCATCTAGTAGTTCGAATAAGTACTAGTTGAATTTATGTATGAAACTATGTTGAATT
TGATGTTTGAACTATAAAGTAGTAGTTGGTCATTTTCAGAATTTTACATCCTTGTTTTGG
ATCATTTGTTGAAGTTGCTCTTTTATAAATCTCTATTTTAGATCATTTGTTGGAGTTGTG
CATTTTTCGAAGATGTAAAAAAGACTTTTTAATGCTTCAAATTTATACATCACCGATTTG
GAGCATCAGAGCATACATCATTTATCGGAGATGATCTTACTCAGTGGCCGGTTCCACCAC
CCAATTTCTGGGTCCCACAGTAATGTAAGTGCTACTTTATTAAGGCACCTTATCAACCAC
TGATGAAGTACGTATGAACACCCGAGAGATTATGGCAGATTGTACCCATGTGCACCCGAA
TAATTGCAACGACCTTCACGCCCACCAGATCGATAATGCATGAAGTTTCAAAAAAGAAAA
AAAGATCGATAATGCATGCATGCATGCAAAAGAAGAAAAAAAGGTGCCCTCATGCATGAA
GAAGCAGAGGCACAGCAGCAGCACCACGCGCTATAAAACCGCGACATCTCCCGTGCTTCT
TCCCACCACACACAACACACCACAAAGCACTCCACTTTGGAGCTCAATTGATTCCAAGAA
GCTCTCTAGTCCACCAGGACATCCACCATGGCACAGCGCTTTCTGGCTGTGCTCGCCGTC
GCCCTGGCGCTCTCGCAGGTCGCCTCAGCTAAGTCCTGGCTCGATAAAAGGTTCAACACC
GACGGCACCGTCCGCACCGGATACGACGCCTCGGGCCAGCAGGTGGTTATGCTCAACCTC
AACCAGCAATCCGGCGCCGCCGGATTCAACTCCAAGCAGCAGTACCTCTACGGCGAGTTC
AGCATCCAGATGAAGCTCATCCCGGGAAACTCCGCCGGCACCGTCTCCTGCTTCTACGTA
AGTCCACTTATATATTTGTTCCGTTGATCAGCCTCCGATTGACATAGACAAAAACCTCCC
TCTACCGATCTTGAGCTGAACCAGCGTTTACTATTAATGGCAGCTTTCTTCCGGTGACGA
CGAGTGGCGCGACGAGATCGACATGGAGTTCATGGGCAACTCCAGCGGCCACCCGGTGGT
GCTCAACACCAACGTGTGGGCCAACGGCGACGGCAAGAAGGAGCACCAGTTCGACCTCTG
GTTCGACCCAGCCGCAGACTACCACACCTACACCATCATCTGGAACCCGGAGAACATCCT
CTTCAAGGTGGACAACCTCTTCATCCGATCCTTCAAGCGCTTCGCCGGCCTCCCTTACCC
TACCTCCAAGCCCATGAGGCTGCACGCCACGCTCTGGGACGGCAGCTACTGGGCGACCGA
GAAGGGCAAGATCCCGATCAACTGGTCCAACGCGCCATTCGTCGTCTCCTACCGCAACTA
CTACGCCAACGCCTGCGTCAGCGGCGGCGCGTGCCATGCCGGCAGCGACAGGTGGATGAG
GAAGCAGCTCGACGGCGACGAATGGGGCACCGTGAAGTGGGCGGAGCGCAGTTACATGCG
CTACAACTACTGCGAGGATGGGTACAGGTTCCCGCAGGGGCTTCCCGCCGAGTGCAACCG
CTACTGATCCTAGCTCTGATCCATCCACACCGGCCGTGCATCCAGTGTTGACATTGATAC
TACCTTTTTCTTGGATACAGTACATGATTCTTGTTCTTCTTTTGTGAATTTGTGATTACA
AAGCAGCCCTACAGCAATGTGTGGGCGATTGTTTGTAGAGTTGTTGTTTTTTTCCTAAAG
AAAGAAGCATGTAAATTTTATTGTGCCTTTGGTTACAGCAATATATAGTACTTTTATGAG
GGGAAAGGTGTGATAGCATTCGGGTGTCTAGACACACTCTATGAACAGTAAAATCAAAAG
AAATAGAAAACAAAATTAAAAAAATCTAAAACTTTACAACATAAAAGATGATCAAACTTT
GTACATATTTGCAAATTATCATGTACAAAACATCTTGTAGAGAAATATGTACAAACAAGT
TTCAGATTTTGATGCTAAAAGTGCTCAAAACTTCAAGCACTGAAATCTTTTTCGTGTGTA
GAGCTCCACGAATAGTTTTTTGGAATGAAAATTTGCAAACACCTACAAAGNNNNATCATC
ATTGATGCTGCAAAGTTTCAGAATGTTTTGATGTTGATTTCTATTTTTTTTCAATTTTAC
TGTTCATGGAGGGTGCCTATTCATAGAGGGTGCCTAGGCACCCGGGAGCTAAAAATCCAC
TCTCCTTTTATGAGCTATGATCGATAATTTTATTTTGGTGTCACTGAGCAAACAAAATAA
AATCAAAATAGTAATCCTATACTAACTCCCATAAACAAATGTATAACACATAGGACGCCC
GAAGATACACAATGGATCCTTGGTCAGGCGCACCCTAATTGAAAATAATAATTAAAATGG
TTAAAGAAATTCAAATAATTTTGAAACTTTTTGGCAACATACATTACTGAGCATAATAAC
CACGTAAAAGTTTCGGGATAAAATGACTTACGCCGTATTCCGAGCAAAGTACAACATGAT
CAATACTATATGAACGCTATTATTCATGAGTTTTGCAGCTGCACTTTTGTTTTTGTTTTT
TTGTCTTGAAACTTTAAATGTGAGTATTAGCTAGACTATGTTTGTCGCAAAAAAGTTTCA
CATTTTTTCTAAACTTTTATTTACTATTTTTACTTCCTTCAATCCAAAATAAGTGTCACA
ATTTTAAACTAAGATTAGTTCAAAGCTGCGACACTTACTGTCCATTGGAGGAGTAACTTT
TTTATTGCTTAATTGGGTGTGCCTACTCCCATGTTTTAAAATTATAAACATATAATTTTA
TGCGCTTTTATCACATACATTACACAGTACTTTTGTACAAAACACAATCTTAATGGTAAG
AGAAAAATTCGGGTATGGGATTACCCAACACTGTACTACCGTACCCCATATTCATAATAT
TTGATGAAGACTTTTTTTAATTGATCTGTTATCTCTGTGCTAAATTCCAAAACTAATTGT
GCTTTTCAGTTTTTGTACTGTCATGACATCTAAAAAGTACACACTCAGAAGAAATTGTTG
GAGGCGACTGATATTTACTATCATTGGTGATTTTGCATCTCCGAGAAATTTTTAAGGTGC
AAATATTATCTGATATATGCATATCAATTTTGGATGCACTTAGTTTTTTGCCCTCAAAAT
TTACATCTACATTCGTTGATTATTATTTAGACATTTACACAAAAGGCTTCGGATTTTAGT
TTCGCCTCGGGCCCCTAAATACCCAGAACCGGCCCTGCGCCGGAGGAGTAACTTTTTTAT
TGCTTAA