| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
 |
Predicted Genes from contig_122203
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_2492 |
2 |
1777 bp |
MLOC_2492.1 |
Available |
Available |
LOC_Os06g11830.1, FRAME:-2, EVALUE:0.0, 13106.m01284 protein hAT dimerisation domain-containing protein, putative, expressed |
| MLOC_2490 |
1 |
775 bp |
AK249801.1 |
Available |
Available |
None |
| MLOC_2491 |
1 |
2382 bp |
None |
Available |
Available |
LOC_Os06g28480.1, FRAME:-2, EVALUE:5e-44, 13106.m02937 protein polygalacturonase inhibitor 1 precursor, putative, expressed |
CDS Structure of MLOC_2492
CDS Structure of MLOC_2490
CDS Structure of MLOC_2491
Contig Sequence (6733 bp)
>contig_122203 6733 assembly3_WGSMorex_rbca.fasta
GGACGACCAACGGTGTCTACTCGGCGATCCTGTTACCGGGCCACCTTCCACAGATCGTTG
ACATGCCGCTCCTGGAATCTCATTTGGAAGGGCTGGGCACCGCCGAAGGTAAAGTTCTTC
CATTGGCTCGCCAACCTGGACCGCTGCTGGATTGCGGAGCGGCTCGCTCGCCGCGGCCTT
CCCCATCACCCCCGCTGCCTGCTTTGTGACCAAGAGCCGGAGACCATCCGACACTTGCTG
CTCACATGCCCTTTTGCGAGGCAGGCTTGGCACAAGACCCTATCTTGGTTGCGCTTGCCG
GCCCCGTCGCCAGAACACGACACCTCACTCCAGGACTGGTGGATGAGGGCGAGGGACGCC
ACATCACCATCAATTCGCAAGGCGCTGATGTCGGCCGCGCTTCTGGTGCCCTGGATGATA
TGGAAGCATAGGAATGCGTGTGTTTTTGACCATGTTACACCATCGCTCGATGAGCTCATG
GACAGGATCAAGGATGAGACCAGGTGTTGGGCAAGAGCCGGGGCCAAAGGGCTTAGGGTA
GTCTTGCCCACATCCTGGGATGTTCACTAATTCTCTTGTAACGATGCTGTAATTGCCTCC
TAGGAGGATGTAACCCCCCCTTCTTTTCAATACAATGAAACGCAAAGGCTTTTTGCGTTT
TCTCGAAAAAATTGTTAAACACTCATGTTTATATGATGACTCAAGCAAGGTGTCAATCAA
ATTATGTCAGAATAGCTTTGTTGTGTCCTTCCATAACATGGTCCAGAATAGAAGGATACA
TGAAACAAAAAGGGTAGTGATATTGAAGTCGATCGATAACAAGTACTTGAAATTTACCAT
ATGTAGCCGATGTCAATGAGCCTCCAATGCAATGGCATGTAGATATTTCATCTGCTCCAC
GGGCCTATATTTAGCCCACGGTTTGGTGTTGTTCGAGTCCACTTATGCAGGTGTGTGCTC
CAAGTTCTTCCTCGATAGTAATTTCTCAGCGTGCGAATAGACTGCATGCCAATAATTGCA
TGTGTCGGTAACATGATGTTCCCTAAGGTAATTTAGTAGTAATAGACTTTCTCATTAAAT
CTACACCGCACATGTCAAATTCCTGAACATGACACTTGTCCGTCCGTACCTACAAAATAG
CTAGAAAAGCACACATCGGTTAGCCAAAATAAAGAAAGCTGATGACGAGCTTCCTTGACG
TCTAGACGTGAGCTTCGTTGGCTCAGTCGTCGCCTCTGCTTCTTGGGGGCTGGTCCGTGG
GCCTGGACTCCAGGGGCTCGCCAATCGTGGCCCACGCGTCGGCCACGAAGATGGACGGTA
GATCCATGTAGTTGTACGAGGGGCAGAGCGCCACAGAGTCCGGCAGCGGGGTCAGCGGCA
CCGGAAACCCTGTCAGGAAGTTGTGCTCCGCGTAGAAGGTCGTTATGCGCCCGTCGAACA
TGTTGTGGGCCACCACCTCGGAGACCTCTTCGGAGATCTTGTTCTTGTTCACGTACAGGC
CCGCTGCCGCGAGCACCTCCAGGACCTTGCTCGAGAGGCCGTTGTGGCTCACATCCACCA
CCGACCACGGCGGCATCGCAGTCACGGCCAGCGACATCATAAAGTTGTTGCGCGACACGG
GCAGCAACGACAATCTCGAGAGGGCGAACACCTTCGGCGGGATCGAGCATGAGGCCTTGG
CGTCTTGGAGATCCCATAGCTCGAGCTCAACGAATCCGATGAGTCTCTGTCCGGGAACAT
GATCGCGTTCTAGCAGTTGTACCTGGGACAGCCAGCATCACGTAACGTATGTCGGTACGA
CCCAATGACACCCCCTAGATGTGAGATTCGCCTCGGCTCGTTCGCCAGTTATACGAAGTC
CAAGCCGATAATTTCATGTCTCGTCCTCCTACTCCTCGTTCAAATTCGTCATGTTCTTGA
TCTGCTGTTTGGAGACGAGCAGTCCTAGAGTACATTGCTCAAGATGTATTCCCTACAGGT
CATGGTGCTCGCTTCGAGGAGGCAAAAGATCTCGTCGAGGTTGTGCCATGACAGTGTGGA
GACTGCAACGATTGGTGAAAGGTTTTGTATGGGGTGAGTTCCGTCAGGTCATAGGCAGAG
TGTTGACACTTCTTGCTCGGGCTTACAAATCGTTCAACTTCTTTGCTTGATCTCGTATAT
ATGGAGACGTGAGGTCCGATCTGATTTGGATTTTGATTTATCACGTCGGTTTCTTTCCAA
TGGATAGGCCAGTTTCCAAAATCAAAGGACTGCCATGCAGTGGCGGAGCCAGCGCCCGGC
CACCCCGGGCACTTGCCCAGGCTCCATGGCTGTGAGACAGCTTACATACATGATAAACAG
TGGGCAAATTCTACCGTGCGTCTTGGTTTACCCGGCAACATCCATGCACGTATGATTCTC
AAACAAAAGGCTTGATATTTGCCCAGGCTTCACGAAATTTCTGGCTCCGCCACTGCTGCC
ATGTGGGCTGGGTTGAAGACCAATCGACCGGGCCTAGGACGGTTCGCTTTGATCAATATT
TATGGATCTTTTTCTTTGCATTGCGGGTTAGTTTTAAAAACCAATAGGGGGTTTTCTGTA
AAAGTTTATGACGGACTAAGAATACCTATTTCTTTTATTAGTAGGTATAGTTTATACTCA
AATGATACATCTTATTTGTTTACGTATTCTATATGTCGCCTGTCGTATGATTATTATTTT
CTTGTGTGCAGAAAACTATGACTCAAGGAAAAGAATACTGTGAAAGGAAAGTTAATTTGC
TGAAGTCCAACTTCGATGAACTACTTGAGGTAATATTGACAGACTGCACTGCTCTTGTAG
ATGCTCATTTCAGCCCAACTGGAGGACAAATGCTTTAGCTTTCACTTTGTTAAAATTATA
ACTGAATAAAAACACTGAAGATACTGAAGTTCATTACATTTGAGCTTGAGTAACTTCTAG
TTGAGTGAGGTAGAAATGGTCTCATGATGAAACATTTAGGAGAAAGGTTTTCATTCATCC
ATGCATGTGTGCTGTAAGCTTGTAACATGCATACCTTTTGGTTTGGTCGAGTTTATCTTA
TATGCTCAGGTCTTGCCTTGTGTTCACATACCAACAACATTCTATGTAAAAGTTAGTTCT
GTGTTGCCAGGTACCACCAAATTAACCTTACGCACCATGTCACTGACCAAGTTGATGGGA
AGATATATAATTCAGTGCCTTCAAATATGATAAGTGTTAGTGCAACTGCTCATTATATTA
GTATCAGTTCTTACAAAACAAACTATCAGTATCGTAACATAAATCAGGGCTTTGGGTTTC
TCTAATTGAAGTTGTAGAACACGTGGAGCAATATATAGGGGGCACCATTATTGGCATAGA
ATGCGCCTGGTCACTACAGGTAGAATTACCAATGCTTTGTTATTCCTTTTAAGCATGTTA
CAAATATGACATTGTTTACTAGTTTACATTAGTTATGCATATTTTGGTCAATCACAATGT
GTGAAAGTGGAATATAGAACAAAACATCGGGGCTTGCAGCACAAAGCACCAATGTCATTT
TGCCGGAAGCTTTTATCATTTGCGGTTGGTGATACTCTGTTAGCAAAAAAAATCATCTGG
TGATTCTCCGGTACGAACCTACCTAGGTTGCACTAGTTATTGATTGTCAGTCGTTTGACA
GTGTAGGCATGTAACAGGAATATGGGATTGTCTTGTATTGATGATGATAGCCACATAAAT
TGCTAGCTAGTCATCACTATTTGGAAGGCACAACTTATATTCAGCTACCCTGTGACTCAC
ATCCCCCTCCACTTAACTTGCACTCGGCGTCAAATATGATATGTCTTATAATTCATGTGT
CTGATGCTCGAAAGCTGGCTATCCCTCAACTGCAAGACACATAGCTAACCTGAATTCCGT
AAGACAACCTCGCTTGGCAGATGATGACTCTATTCTTCATGTGCAGATGGCGACCAAAAA
GAAGAGCATAGCAGACGAGATGGGCATGTTTCTCCAAGCCAAGCTGAGGCAGGCATCGCC
GAGCTCGAGTTCATGAGAGCAGAATGCGCACCCTGTCCCTTGCTTTACTGGAGCGCCAAG
GTGGTTCGCTCGCAGCCCTCAGGAAACACAGGACGTTCTTTAGCTGTTTTGGCCGTGTGT
ACGAGGTTCTCTCAGATGGTTTACTGAACCAGCCTGCTCTATCGCCAGACTCATCATCGA
GTAATTTGGAACTCGGTGTCAAACGTGTGTCTTAGCTGTGTAGTCTGCACTTTAATGGCT
TTGACAATCAGTTATGATTTTGTTGTATTTTGATGTTTGGATGCTTGGTTTCGTTTTCAC
ATACTGTTGTTGCTTTTCCTGGTACTTGTTGAAGCCTTCATATATGGTGTAAGAAGTACT
TCTACTGGTTCATGCACCTAGCCACCATGAGTGCCACTAAGTTGGGAATGTTAAAGGAAA
ACCCCTGGTTATTGTGTTTAAGAATATGAGGAAGAACCACATCGGCACAAATTCTTTCTA
TGGATTGCCTATAGGGGCAGATTGAACACCAAGGACAATATGACAACTAAAACCTCCAGT
CAAACCCATGCATGATGTGCCCAGCGCTGGAGTACATCCATCATATGCTGCAGAAATGCT
CAATGGTTTTGACGAAGTTAAATGTCCAACAAACAGCCCTTCGAGAACCACCATATGATG
GACGGTTAGGAGGGCAGTGGTACCCCCACCCACGTGCCTATAGCGTGCTTCTCAAACGCA
AAGAAAAGCCCTCCAGTCAAGCAACATTATCTACTTTGTTGACCAGGTGCAACAAGAAGG
ATCCTCCCCAATTTGCTTTGCAGTATATGCCCTTAAGTATACTCAGTGACACTAATGCTG
CACGCTCGAATCTGCTGAACAATATCGCTACTGAGCTGCATATACATGAGAATACAGACA
TCCTGATTATGAACACGCATGCAAATCAAAATGGTATGCACATGAAGATTGACAGCTTGT
TCACAGTAACATAAAAGGTTCACAGACTACTCAACAGCAAAGAAAATATGAAGGTTCAAG
GCTAGTTCGTTCAACTGATACAGAGAATTCAAACTACGTAGTAGATAAAAATCGCAACAC
GTCCTAGCGGTTATTCACAGCTCGGAAGCGAGATATGATGGCATCGTCCTTCACTTGCCC
AAAGGTTTCTCGCTCAAGACATGTAACCAAGCAATCATTCGCGCATTGCTCCGACAGCTT
GTTCTCCGCCTTATTGTTCACGTAATTCACTGAAGATAGGTCCCTCTCATCACTGGCGGT
CCCTACAGGAAGGATTAGCGCCAACCTGAGAAGCCTGTAGACAATGTTGTAAACACGGTC
CTTCCTTGTTTCAACAAGCTTGATAGAAAGCTCCGCAAGAGTCTTCACTTCTCTAAACCT
TTCGTCTAGACGCAGATCATCAACGAAGTTTGAAAGTTGGAAGGGAAGATGCAACAACTC
ACACTGTGAAAAATCCTCGGGATAAAAGTTGGCAAGCTTAACCAGCTTTTCCTCATCATA
AGCAGCAAATGAGTTGACGGGATTGAATGCTGCCATGCAAATCAGTAACTCCGTGTTGAC
CTCATCAAACATGCCATCAAGTTCTCGAAGTTGACTACCAATGACATCCAAAAACATATC
AACGTGGTAGTAATGAAGATTCGTGGCCTTTTCGTAGAACTTTGGAGATCTCCCGACCGG
GTCATACAAACCATGCATGTCCACAAGTTCGATGTCATGTTTCACACAAAAAGAGGTGAC
CTTCTGAAGAAACCTTTCCCATTCACCATCTTCCTGCAGTAACTGCAACCGTTTCTTTGT
CACGCTAACAAGATCGATGGCATTAACAATATCTTGATCCCTCTTTTGTAAAGCACTGCA
TAAGTCATCCGTATACTCAAATATGGTTTGCAGCAAGTGTGCTATAAAGACAAACTCAAA
TGTCTCGAATGCATAAGACACCTGTTGAGCTCGTAGTGATTTTATGCCACTGTGCTCATC
CCCAATCATACAGAGAATTTCCCAAATTGCAGGATATAAAGAGATAACATGCATCACATT
TTCATAGCGAGATCCTCGAGGAGTATCACAAGGCGTTCCCAGGCTCTCTCGATCAAGACC
ATATTCAGCTTCAGTTTCTTCCAATTCAAATGTTTCGATGATATACTCAGCTTGAGCTAC
TCCAAGCATTCGTATCTTTTCGCAGCACATCACAAGAAAATCCATCAAATATTGAAGGTG
ATAAAAGAACCAACCACCGTGAACATTCTGCTTAGCAACAGCAACCATATTTACCTGAAG
TTGATGGGCAAAGCAATGAACATAATAAGCAGAAGGGGCCTCGTCCACAATTAGTTTCTT
CAGACGATTATCATAACCCTTCATGGCACAAGCCGCATCATATCCCAGCCCACGGACCCT
AGAAAAGCTCAGAGAGTGTGACGTAAGCAGATTCTGAATTGTTGTTTTAATTGTCAAAGG
GGTAGTGTCTTCAACTCCGACGATACCGAGGAGCCTTTCCACTGCCATTCCTTTTGTACC
AACATAGCGCAGGCAAATGGCCAATTGTTCCTGTTGTTCCACATCGCGAGATTCATAAAC
AAGCACCGAGAAATAACCATCACCAAGATCTTCGATGATGAGCCTAGTCGTTTCTTTGGC
ACAAGCGTTGATGACCTGCTCCTGTGCCTTTTGGTCCAACAGCTCGCTGCTTCTTGGAGC
ATCCTTCAGATCC
