morexGenes - Barley RNA-seq Database

Contig contig_121184

Source Contig contig_121184

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_121184 (2328 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_121184

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_2378	4	1392 bp	AK370608	Available	Available	None

CDS Structure of MLOC_2378

Contig Sequence (2328 bp)

>contig_121184 2328 assembly3_WGSMorex_rbca.fasta
TCTTGAAGTCGTGCATGAGGTCGGCGGAGACGAGCACCAGCTGCTTCACCAGCCCGCAGG
TGACCAGCCCGGCCACCACCCCGTTGTCCTTCCCCGCCCACGCCGCGAACACGAACAGCG
CCACCTTGCCGTAGTTGTACCCCATGTTCATGTCGGTGAGCCCGGTGCCGTAGGCGTTGC
AGAACCCGAGCGCCGGCGCCAGCAGGTAGGCGATCACCACGAAGTACCACTTCACCTCCC
GGAACATGAGCGGGATGGCCACCACCGCCACCGCGCTGAGCAGGGCGTACCCGGCGTAGG
CCACCCACGCCGGGATGTTGTCCCTGTTGAACACCTCGTTGCGCTGCAGGTCGTCGATGG
CCACTGAGTCCTCATCCGCCACTGCAATGCCAATGCAATGTCAGCATGGTTCATCCGTAA
CAAAAGGTCAAAGTAACACGAACAAATCTTGTACTATAATTCACCTCTGTTGAGACGGCC
GCGCTGCGATTTCTCGTGTATGCTCTTGAGGGTGACGAGGATGACTTTGAGGAAGTTGTA
GAAGCCGTCGCCAATGAGCAGCGCAATGCAGAGGAAGGCCTGGACATGGAGGGGACAGCT
TAAGCCATTGTGCCTGAGCTAGTCCTTGACGAACACCTAAAATTCAGCAACACACACTCA
CCTTGTAGCCGTACAGGCCTGTCATGCTGCTGGCAGACGCCTTAGCCGAGTACCACTTCC
CCTCCTGCTTGCTCATGAGCGGCCACATTACGCCCCAGGAGAGGACGGCGCCGAAGAGGA
GAGAGAGGTTGACGAGGTGCGAGCAGATCATCCCGGCGCCGACATACGTCAGGCTGAAGT
CGAAGAAAAATCTGGCGAAAGAATCGACGAGTTATTAAAACGGTGAACTTTTGTGATGCA
TTTTCAACCATTGAACTTAGAATTGTTCGGCGAGAAATAACAAGTCATATATAGACTTTA
CGTTTGCTTCCAGGCTTTGAGCCCGAAGGTGGGGAATTGGAGGAACCCACAGAAGTCGCC
GCCGGTGTAGAACCACTGGAAGAAGCTCCAGAAGAAGCTGATCCCAAAGTACTTGAGGAA
CCCACGGACCTGCTGCCTGTTGAGGTAAAGGTGAAAAATTCTGAATCAGTCCGGGCCATC
CGTTTCTAAAGCATTTTTGCACAGTTAAAACAAGATTTGATTCATCGTAGCTGGGAATAA
ATGAAAAGATGGTGCTTTTCTGGCAAAAGAAAGGGGGGAGAAAATAGGGGGTCGTACCTT
GCATTCTTATCTCCTTGAGGTGTGTGGAATCCGTTTATGAGCACGGCAGTGGCAGTCCCA
CTTGGGTAGGTTAGCTTGTAGTCGATCACCAGTACCTGAAAGTGTTTGGTTTCACCAAAT
CGTCAGTAAAATTGAAGACCGAGTACAAAATCGACTGTAAATATCTTTCTCGTCAAGAAG
AAAATAAAATGCAGATTATGTTCCGTCAGCATTTTGTAGCAAATGGTGACTGATTGAGGC
TACAAAATCACTTGATTGTAAATATCTTTCTCGTCAAGAAGAAAATAAAATGCAGATTAG
GTTCCGTGAGCATCGTGCCAAACGATGACTTGGGGGTTGGTCGTCGATGTTGAAATTCCG
GTTAACAAGTGAGAACAGGGGAAAATAATTTTTTGGGTAGGAGGTGAGGGGACTAATCGC
CGTCAGTGACCGCAACCCTGATGCTACGGTCTGCCGAGCAATGCCAAATTTTCAGTTCTT
GTGACAGTAACAGCAACGACCCAAAAAAATCAGGAAGTGCGGCTCACCATGGACAGGGAG
AGAGCAGAGGAGGAATCGTGTGTACCTTTCTGAGGGGGAGCAGGGTGAGGAGGCCGACGA
AGCTGATGGCGAGGAGGAAGCCCATCATCCAGCCGATGCCGGGCTCCTTGTAGCTCCCCG
GCACGTTGCCCGGCGTGTTCACCCCGGACAGCTCGTACGTCTTCTTGTCCAGCCCCAGCA
AGAAGGACCCGAACCCGCCTGCATGCCCATGATTCATCGCAGAGCAGGGATCAGTAATCA
AGATTTGATCTGGAAATGGGGTCGGCAATGGCGGGGGTGCTGAATCGGGGGAGTAATTAA
CTGGTTGATGCTTACCGCCGAAGCCGATGGTGTAGCAGGCGACGGCGCAGGTCTGGACGA
CGGTGTTCTCCTGGCGGGTGAAGGGGCGGGACGCAATGCCGAGGCGGTGGAGCGCGTGCG
TCCAGCCGCGGAGCGCGAGGAAGGCGAGCAGCGCGGCGGAGACGTTGAGCGTGGGGACGA
GCCCCGTGGTGAGGCTGAGCTTCATGACGATCACGGTGTACACCACGC