Map Locations of contig_120608 (6396 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_120608

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_2310 1 953 bp AK368339 Available Available None





CDS Structure of MLOC_2310






Contig Sequence (6396 bp)

>contig_120608 6396 assembly3_WGSMorex_rbca.fasta
TTCATCGGGTATACCATCATCATCCCCATACTTCACAAAAGCATCAGCCACAAGTTTGAA
CCCATAGTTGAGAGTGGTAACAAGTGGATCTTCAAGAACTTTCACTACATTTGCCTTGTT
TTTTGGTGGTCCTTTGGGGTGTTTGGACTCGCCAACATTGGGTGATGTGTTCACCTCACC
ATTGTCTTCGTCGCCCACATTAATAGAAAGTAGATCATTCCCAGACCTAGCATTTATCCC
AGTAGTTGTGGTTCTACCAAAAATGGTCTCCATGGCATGATAGTGTTCAATTGGGGTATT
CAGGAAAGGGGCATCAGCTTTGTGTGCCTACAAAAAACGTGCAAATGATTAGCATAATGT
AGGCACAAAATAGCATGATATGTGCCATAGGATTAGAAGCTTACCATGCAATGACATGCA
TAGTGTTCTTCGCTAAGCCTAATTGTGCAAGTATCTTCATCCCATAGAGCTCAACTTAAA
CTCTTCAAGCTGACTACCCTTCCCCAAATCTTCCTCCACTTCTTGAGATGGTTTCTAACT
TGTTCTCCAGTGACAGCTAGTTTGAATTGCTCATTCAAAACAACAACACACTGTTTGTGA
TGTGCCTCCCTGAATCCACTAGAAGTCCTCTTCCCTTTAGCAACAAGGTCGGCCAAAAAA
CCCAGCATCTTGTTGGTCATGGAAGGAGTCCATACAATGGCCCCACTCTTCGCGGAGCTC
CCACTCATAGCGGTGACTTCAGTATTGTCCATTTCTGTGAAATAATCAAAAGGTTAGAAA
AAACGGATACATGATACAATCTGTCCAGCCATGAAGACAAACCAATAAAATGGATGAAAT
TTGAACGAATACATGGTTTCAATATCATAAGTGATACAATCTGTCCATCCATGAAGACAA
ATCAATAAAATAGATGAAATCTGAACAAATGCATGGTTTCAATATCATAAACAAGACAAA
CTGTCGAGCCATCAAATAAATGATACATGGAGTGACACACACTCATAAATTTGCATACAT
AAGTTGTCTATCTTCCCACATTTGGGCGGCAATTTGCATCCTATGGTCTACTGTGGCCCT
ATGGTGACTTGCTTGTTGCCTTGTTGTTCAAACTGGTTGGGTGGTCCAAGTGACTTCCGG
TATAATAAATTCAACAATCCCTTGTGGCAGTGCATAATTATGAAGAACACAACAAGCTAT
AAAAATGTTGACTTGCACCGGGAAAGAGAAGAAAGGCTTGTCATCATCTAAATTTTTGAA
ACGCCTCTTGAGAGATCCAAAAGCCCTCTCTACCGTGCCCGTAGAGATGAATGCCTAAGG
TTGAATAACTCCATATCATTTTGGACCGGATTGTTGCCCCACTCATTTAAATGGTACCAC
ACACCACGAAAAGGTGGTAAGAACCCAGGCTTTGCTCCATAACCAGCATCAACTAGGTAG
AACTTTCCTAAAAAATGAAATAGTAATTGGTGACAATGGTTCTTGTAATGCAATAACAAA
TGGACAATTTTCTTACGCAACTTCTTACCATGCGGTACTTGTAAGCCTCTCTCACGCGTT
AATGCATGAGCTAAAACAGTAGCATCATGTGCTGACCCTTCCCAACCAGCCAACACATAC
GTGAAGCCTAGATCAAAATCTACCGCTGCCATCACATTTTGAGTGGTGAAGGCCTTCCTA
CCCCAAAAAGAATGCTCCACAACTTTGGTAACACCTGCTCGCACATGTGTACCATCGGTA
GCTCCAATACAATCCTATATAGTAATAAGTATTAAATGGCATATCATATAGCCTAGATAG
CTAGCGAATAGTATCTGAATTTACCTTAAAATATGGGTCAAATCGATGATTTCCTGCAAT
TTTTGTGGGGGTCTCCAATGATGGTGACCTTAGGGTGTGTTTGGTTGCTGACATGGGCTG
GAATGTCACGGGTCGGACCCGTTACTAGGCCTTGTTCCAGCGTTTGGTTTACCAACCGGA
ACAGAACCCACTCATTCCACCTTAGGGAATATTCCATCGAGATCCGGAATGTGCCAATAC
CACCAAATCCACGGAATCACGCGGGACCAGCCTCCTCCGCTCGACCTCCTCCTCCTCTCG
CCCTGCTCAGGAGCGCCGGCCTCTTCCTCCCTCCCTTCCCTACGCTGTCGGCCTCTTCCT
CCCTTCCTTCCCTGCGTCGCCGACCCTCTTCCTCCCTCCATTCCCTGCGTCGTCGACCCT
CTTCCTCCCTCCCTCCCTCTGCCACGCCGTTGTCAACCATCGATGTGTTGCACCGCCGTC
CCTCGAGGTGCTACACCGCCGGCCCTTTCCCTCCCTCCCTGCTGCACCGCCGGCCGTATA
CCTCCCTCCCCACTGCACCGCTGGCCCTCTTCCTCCCTCCCTCGTTCTCATCCTCTCTCG
ATCTGATCTGATGCATCTCATTTTTTTCTTGATCTGCATGATAGAAGGAGAACAAGGCAG
GGTACTCCGGCGAGGCGGCACAGCGAAGCAGAGCTTCCTCTCATGAAGGTACGAACCTTC
TTCCTCTTCCCTTGTATATGTTGTTGTTGTTGCTACATTTTATTGCTAAAATTGTTGTTG
TTCAGTACATATTTGTGTTCAAATTGTTGTTGCCCAGTGCATCTTTGCAATATGTGGTGA
TGTGTAATTTACGGTAGCATGTATCAATTGTAGATGGTGAAGAAGATGAACAAAAGAAAA
AGGATGGTTAGGGGAGCGGTTGTTTTTATCACACTAGCTGCAATAGCAGTTATTGTTCGA
GCTTTAGTAAGGAAGAGAAGGCCACGTGTTACATATGGCCCAATGCATGAAAGAGATCGA
AACAGATTTGATTATCTGAACCAAAAAATTTAGCAAAGTGATGTGTTGTGTAAAAATATG
TTAAGGTTTGAAAGAGCTTCGTTCTTTCGCTTGTGTGACATACTGAGGGATCGCAAGTTG
CTAGAAGATAGCCCACATCTTAGCGTGGAGCAACAATTAGCGATGTTTTTGCATACAATT
GGGCATAACCTTCGGAATAGGGTTATTTCAGCCAACTTTTGTAGTCATACGACACAACAA
GCATCTATTTTAGAAAGGCTCTTCATGCCATATGCGAGCTTCGTAATGATTATGTAAACT
ACTACTACTATTACTCCTACCAACAAGAGTAGGATGTAAAGAGAATGGATTTCATACATG
ACATGATAAGGTAAACATTTGGTATACAACTCAGACTTTAGCTTGTCATATGACTATTAA
CGATAGTCGATGATTATTAATTGCTAGGAAAACACAAATATGTGAACTTCAAGAAATGTA
CCCAAGAGGAAGTCAGGTAATGGCAACCCATGACTCCATGTATTAGTTGCTGACACTGGA
AAGGCAAGTTCTAGATGACAAAACGGAAGTTGACTTCTGTCATCATTGATGCCCCCAACC
TCACTGATCTACTAACTTCGTTCCTAAATAACTGTAGTTGGGGAAAACTAGTATAGTTTT
CCCCAACTACAGTTATTTAGGAATAGAGGGAGTATTGCACATGAAAATATAAAGATGTGA
CACTTTAGTCTAATGATATGAGTATTGACCTCAGAACATTATTTGTGCCCTTAGTTACAG
GCCACTTCATGTGTTCCTTCATCGTGTTAAAATTTTGGATACAGACAAGAAACAGGCAAA
CAAAAAGACATAGATAGCAAAGCCCTTCAACAAACAGTTTCCAGCCAAGGCTTCCCCTAC
TCAGACTATAAAAGGGGGAAACCTGGACATTATTTCACAATTAAATTTGACACATAATAC
CAGCTGTGACTATTCTATGTAGGACAGGAAACAAATCCAATGTCCTAGAGTTACCAGTTT
CAATTTCTTCAACAAAACATCCCATCTCACTATATGGCTTACTCTAAATAAACATTACCA
TTGCTAAATTATATAGCAGGGAGAGAGCTCACAGGCCTAGAGGTTGCAGCTCCGTCTTTG
GAGGCAATTGTTTCAGAACTGGGGGTACATGCTGCAATGGGAGAACTTGTACCCCTGATA
GTGGGGCAGCACAGCAACTTGCAATGCCCATAGCAATGGCATTAACACTAACAGTATTTG
CAATTGCAATCGTTGCAGTATCTACCTGCTGCAAAACACTCACCTAGAAGTGCATTCAAT
TAAGAGACCAATCAGTAGAATTTTATGATAAAAGTTCCCAAATGTCTTAGCCTAACAATA
ACAGAACTGGTGTAACAAAGACCAACAGTCACAGATACAAGTAGCTAAAACAGCAACATT
CATCGATGGAAATCCATGGACCACCAATAGTCACAGATACAGAAGTAGCTAAAACAAGCA
TAACACCACCATTTTTTGCTTACAAACAATCATTAAGCAAATGGAGGTTGGTTTAATAAC
TAGGGAATGGAGGCAACATCAACATCTCCTTGAAACACAAGCATGCCTTCATTTCCTTGT
CCTCTTCGATCTTGGGTGCCAGATAAATCCTAATGTAGGCAACATAAGCATATCCTGGAA
ACACAATCATGCCTTCATTTCCTCATCCTCTTCAATCTTCGGTGCCAAATAAAACCTAAT
GTAGCCCATCTCGCCAATCTTGTACTCAACCACAACTGGCAGCTCAGATGAGAGGCTGAT
GGTGACTTGGTCTGACAGTGGGCTTGCCTTGGTGAAGGAGTTCATGTACCTCAGAGCAAA
GGTAAGAGACACTGGCTCTTGCATTTCTATAATGGTAGATTCCTCAGGCTGCATTGACAC
AAACATTCATTAGCTATCATACTGATATATATCCCTAAAATGGTTCTCCAACATGAAAAC
CAAGGCTCAAACTGCAGGGGTAAAACAGGTGAGGTAAATACTCCAGAGCAAGTCTTTTCT
TGTTCACTGATGTCACTGTCCAGTTCAACAACAATATTAAAATGGTACTCCAACATTTTA
CACTTGCAACATTTTGCTAGGATAACCAGCTCAAAGTACAGGTTCATCAAAATTACTTCA
TATTGTAAATATCATGTTACAAAAATATGGAACTGCACTTCTAGTAGATTTGTTGGACTC
AAGATTCAGTCAACAAAGCTATGTAACAAACTAAAAACACTTATTGAAGTCAAAAACTAT
TTAACAATGCAAACAAACTAAACAAACTAAACATTTGAAAGCAAAAGACTGCAGAGTACT
CCCACCGTTCCTTTATATAAGGTGTATTTTGTTTTTGATAAAACTCCACAATATAAGGTG
CATTTGTTCTAATTTCTCATAATTCCAATCTTAACCTTCTAGAAAAAGGAAAATGTATCT
CTTTCAATTGTATGTATCTCTTCCTTAACTAGACTAAATGATTTACTTGTTGCTATTCCA
CGAATTAGACAAGGGTAATTTTGGCATAACTAATCTATAATTATATGCCTTGGTCACCAT
GCTAAAATTTATACACCTTATATAAAGGAATGGAGGGAGTATCATTTAAGGCCATGTAAG
GGAACAAAATAGCAGGACTGTGGTGTAGACATGTTGGGCAAATTTATCATAAATAAACTA
CACCAGCAAAGATAACTACCAAATCGTCCAAATACAATAACTGGGTAATTAGTAAACAAT
CTGGTTTGAGAATTAGGTGCAGCTGACTTTTATGTTGTTACAATTAAGGCATTGGCAAAA
CACTACAAAAATCCCTGCCATTGGGGTTCCTGACTCATAGTACAATACACCTTGTCAACG
CATAAAAGGGGAACAGATCTATACTAGCTAGTGGAGAAAGGGCGCAATATACCTTGTCAA
CGGTCTTGTTCTGCCTGCAAACAATGTTTGCAGTTCCAATATCTCCAGCAGTGGAGAACT
TGACACCCTCCTTGGTGACAGAGATAATAACTGCAGCGCACAGAAGCCGCCGTCAGACAT
GTAAGAAACAGAGATGACAGGTGCAGTAGAACAAATCAACACATGAAATGGAGGATTGAC
CATACCAGTGTCGCCGATGCTGCTAAGATCCTTGCAGATCCTGGAGAACTCCGAAGAGGG
CATGCGAACGATGGCCTGGTACTCGGAGTCGGGGATCCCGAGGTGCTCGCTGTCGATGTC
CATGAGCTTCATCTCGAAGTCGGCAATCTTATCCTGATCTGTCGGCCAACCGAAACCACG
GTTACCATCGACACTCACGGCTAACGAAGAGGAGCAGCGGAAGGAGATGGAAAGGGCGGT
GCTTACTGGGTGACTCGAACATGAAGGTGACGGTGTCGGAGCCGTCGTCGGCCTTGATGG
TGATGATGTCGTCGTTGCCCGCGCAGCGGAGCATCTTGGCCATGTTGCCGAGGTTCATGC
CCATGGAGAGGTTGCGGTCGCAGCGGTAGTGCTCGAAGCCCTCGGAGCGGAGGAGNNNGG
CGACGAGCGCGACGTGGGAGGAGTCCATGGCCTGCA