morexGenes - Barley RNA-seq Database

Contig contig_119275
Source Contig contig_119275
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_119275 (10799 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location
Predicted Genes from contig_119275

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_2171	3	2245 bp	MLOC_2171.1	Available	Available	LOC_Os02g07180.1, FRAME:-1, EVALUE:8e-80, 13102.m00809 protein expressed protein
MLOC_2172	1	181 bp	None	Available	Available	None
MLOC_2170	7	3946 bp	MLOC_2170.2	Available	Available	LOC_Os06g45860.1, FRAME:+3, EVALUE:0.0, 13106.m04841 protein molybdenum cofactor sulfurase, putative, expressed
CDS Structure of MLOC_2171

CDS Structure of MLOC_2172

CDS Structure of MLOC_2170

Contig Sequence (10799 bp)

>contig_119275 10799 assembly3_WGSMorex_rbca.fasta
TTAGGAACGGAGGGAGTATTAATCTGTTAATAAATCGTTTCATACCAGTTCCGTGTATCT
CTTTATTATGAAAGACCAGATTGGCCCGACTGGCCTCTGAGACCGTTTAGCTCACCGACA
TGACCCTAGTCTGTTGACCTTCATCGACGAGGCACCATTGCTGCTCGTATGAATGAGTGT
ATACGCGTGTATATAAGTGTTTGCGTATTAAAAAAAATCTGTGTGAGAGAGAGAATGTGA
CGCCATTGATGCGTCTGCAGAAGCTTCGTGTCCCCTCCATTGACCGCGGGAGGGCAGCCC
AATGGGGGAGGACTAGGAGCCAGCCAGAGGAGGGGTCCAATCCAACCGTGCGTGCGTGAG
CCATTACGTATGCGTAGCCAGGCCACCGCCCTCCCTCCGCCACTCGCCGTCCGCCGACGC
CACACGCTAAGCAATTTCCAATCCCCCGCCGGGCACCCCCAACCACCGCCGTCCGGCCCC
CTTTCTCCACCCCGCGCCCCCCTTTCCGTGCACGAGGGGAGAATAGTCTAATCGGCCGAG
TGCGCGCCACGCCTGCCGCCACCTAGCTCCACTCTCGCCACCGGATCAATCAGGATCCCC
CTCGGGTTCGCCCCATCCAGCTAATCCGGTCGGCCTTTTCTGGTTCTGGCCGCGGTCTGA
GCCGAGAGGATTCAGGAGGGGGGCGAGGGGGAGGCATGGAGCAGAGCAGGGAGGAGTTCT
TGGAGCAGTTCGGCGCCGACTACGGCTACCCGGACGCGCCCAGGGGCGTCGACCAGATGC
GGGCCGCCGATTTCAAGCGCCTCCAAGGTGCGGATCCGTTCACGGTTCTCTCAATTTCTA
TTCTTGTCCCCTGTAGAAAGTATGATTCTTGAGCTGAGAGTGATGGCAGTTAAATCAATG
TGCTGGTGTGTGCGGATGGAGTTTAATTATAGCATTTAATTGTGTGCTTTGCTTGGTTGT
GGGGAGCAGGGACGGTGTACCTGGACCACGCCGGCGCGGCGCTCTACTCGGAGCCGCAGA
TGGCCGACGTCGTCAAGGACCTCGCCTCCAATGTCTATGGCAACCCTCGTATCCTTGGCT
CGCGTTGTCGAGAGACATTGTTTTGTTTCCTGTTATCGGTGTGTGTGTTGTGAGTTCTTG
TGGATGTGGCCCTTGACGTGTTTGTTAGATAGCCAGAGTGACTCGAGCATGGCCGCGACC
GACCAAGTTACTGCTGCACGCCATCAGGTACCTTTCTATAGCTTGTATCTTGTCAGTCCT
GTTTACATAATCACTAGCAATGAACGTTTTGAAGACCAAACGCAGTAGTGTCAGTTTCTG
TGTAAAGAAATGGCAATGCTGGGCACTTGCCGATGACGTTATTTGGCGTACATTTTCCAT
TTATGCCCTAAATGTAGCTACTGCCGTGTTGATCTCAACTTTCGGTAAGTTTAGAAATGC
TCAAACTACGTAGAGCTAAACTAGGAGAGTATTGATAAAGTTTGCACCTTGTCATTGTGG
TTCAAAGTTTGAACGATGCCGTAATTTGCCAACATCTTGCTCTATTCCATGCATTTGGGG
TAATTTGCAGTCAGCTTTTTTCTTGGTTATGATGCAGACTTTATCCTACTCAGGTCCTAA
AATACTTTAATGCATCTCCAAGAGACTACAAATGCATATTCACCTCCGGGGCAACAGCGG
CTCTGAAACTTGTTGGTGAATGCTTTCCATGGAGTAGAGAAAGCTGTTACATGTACACAA
TGGAGAATCATAATAGTGTACTTGGGATAAGAGAGTATCCTTCTGTTAAAATTCTCAGTA
CCAGATCACAACTTTATTTGTCTGGCTAGTTGAAGCATATGACCTTTGCTGACATACAAG
CTGCAATAGCACGATGGGTTCCTTATCAATTCAGTATTATCAATAGTTTCTCTAATTTGA
TTTTTAGGAAAAAAATGTTCGCATAAAGTTGAGAAGTTCATGTTGACACAGGGTATCTTG
TAGAATCTGTGTGTCCTTAATGTATTTATAGATATGCTCTGAGCAAAGGAGCAACTGCAT
TGGCGGTTGATATTGAAGAGGATAAGGGTCTTGAAAAGAACCATGGAAGTCCTAGTTCCG
ATTTGTTTAAGATCTCGAGACACTCAAACCAAAGAAGAGCTGGAGATGTCCTTCCTCAGA
ATTGTCAGAATGGAAGCCTTTCAGTGATTTCAGGTAAAGTTTGTCAGAATGTCATCTATC
ATTCATCACATACTATCTAGATCTTATGTTCAGTTATAATAGTTAATCTATGGGCTGGAG
CTTATATTTTTGTAGAATTTGGTTTTCTTGCTTTATCTTCATTAGATTTGTTTTTTCAGA
GAACTATGAATTTATGAAACTTCCACAAGCTAGATGCAATTTTTTTGTCCGCATTCTGGG
AATGTTTTCTAATACACGTGTTTTATTTATTTAAATCACATTTCAAGCCCAATTGTTGTA
CCATGCAATGTAGACAAATAACTCAAATATACTGCAGAATTTCTTTGTTCAAACTCTGAA
AGTGATTATGTGGAACAAGAAAAAAGGAAAAATCTACGAATGATTACATATAGCAAACGC
GGAAGCCAATTTGAAATTTCACTCAGTTAATTGAATGTTGGTGCTGATGTAGTTATTATC
ATTTTTAAATTTAAGTTTATCTTTTTTCCCTGTGGTGTAGAGACCAATCGGAATCTGTTT
GCATTCCCTTCTGAGTGCAATTTCTCCGGACAGAAATTCAACCTTAACTTGGTCAAGCTT
ATCAAGGAAGGAAATCTTGTGGGGCTCCCTTCGCAGCAGCAGCAGCAGTAAGATGGTTGA
TAAATATAACAGCCATGTTTTGTACATTGGACAAGACAATCAGTTTCTCTAGAAGGGTTA
TCACCCTCTTTTAGTGGAACTTAAATTACCTTGACCATACTTACTAATTACAGAAAGTGC
AGGGGTCAATGGATGGTTCTGATAGATGCTGCAAAAGGATGCGCAACTGAACCACCAAAT
TTAGATGTGTATCCTGCTGATTTTGTTGTCTGTTCATTCTACAAGGTAAATCTCTATGCT
CCTATTATTGGCTAGAAACCGTGGTCCTAGAGATGTGACCAATTGCTATATTTTGGTAAA
CTTGCAGATATTTGGCTATCCAACTGGTCTTGGTGCTCTAATTGTGAAAAACGGTATGCA
ACAACCACTTATCACTTTAACTTGGCATAAACTATGTTGGATTTTCGCATGCTATAAACT
ACATTAAATATCCTAACATTAATCAATTAAATCAGTACAACAACCTTTATTTAGTTGCTG
CCGATCTCCCCAATAGTGTCAACTTCGTGACATCTTTCATATTTTCCATTTTGACAGAGG
CTGCCAGTTTGCTGAACAAGACATACTTCAGTGGAGGTTTTGTGTTGCCCTGCTTAATTT
ACATTTTCTATTTATCTTAGGTCTTGTTAATAATTTAGTTTCTGAATTTGTGTAACATCT
GTAGGAACGGTAGCTGCTTCAATTGCTGACATTGACTTTGTTCAGAAAAGAAAGAGCATC
GAACAAGTTCTTGAGGATGGAACAATCTCGTTCTTGAGCATAGCTTCTCTTCAGCATGGT
TTTAAGATAATTGAGATGCTAACTACCTCCGCCATTGCACGGTATCTATTAAAGATAGTT
TGGTCCTAATATTCTGTCTTGGATGTCCTCTGTAAACACTCTGCTTTTCTCTTGTAGGCA
CACATCATCTCTTGCTACTTATGTGAGAAAGAAAATGCTGGACATGAAGCACAAAAATAA
GAAAAATGTTTGCATAATCTATGGACAAGAAGCTTCTAAGGTAGATAAACCAAGTTATTT
AATGCCTTCTTTAAGACTTACTGCTGCTATTTTTCTGTTTCTTCCATCGGTAGAGAATGG
TTGCCACCAATTTAAGAGCTAAACATTATGAAAATGATATTCTAGGCTTCTTACCTGAAA
TTGTTAGCTCTATTCATTTTTGTTATATCATATGCTTTAGGTGGCAGATTTGAAGACGAG
CCCAACGATCACATTCAATTTGAAAAGAGAAGATGGCACCTGGTTTGGATACCGTGAGGT
GGAGAAGCTCGCTTCCTTATCAGGAATTCATCTGCGTGTAAGCGTATAAGCTGAGCCTCC
ATTTTACATATGCCGTGGCCTTTTACCCTCGTTAGTTCCTTGGCTGATTTTACCCTGCTG
TCTTGCAGACGGGCTGCTTCTGTAATCCTGGGGCATGTGCCAAGTACCTTGGCTTGTCGC
ATTCGGATCTAGTTTCCAACTTTGAGGTACACCATACAGACTTATCTAGTTAACACGGCA
AAAGTCATATCATTATAAATGTTCTATACCTAAATGACGTAAATGAGTGCTTGCCAGGCT
GGGCATGTTTGTTGGGATGATAATGACGTAATAAATGGAAAACCAACTGGTGCTGTCAGA
ATATCATTTGGGTATATTTCCACTTATCAAGATGCGGAGGTATGATTTTGATAAGTTTTC
CATGGCATTTATTAAAAATTTCGCTACGTAGATCCTCTCAAAGAAGACAGTATCTCATTA
ACTTTTCTTTTCTAGGAATTTCTGAAGTTCCTGCAGTCTTCTTTCCTGTCAAAACCAATA
GCATTCAGCAATGGGCACATGTTGAATATGAGCACTCTTAACTTAGTAGGTAATAGCTTT
ATGATGTGAATTGTATGTCTCTTGGTATGCTTTTACCGGTGTAGTTCATATAAATGTTAA
TTGCAGACAATCAGAGTCAACAAGTTGTTCCAGATGTTCGCTTACAGTCCATAATTATTT
ATCCGGTGAAATCTTGCCAAGGATTTAGTGTGCAGAGTTGGCCGCTGGCCACTGGTGGTA
TGTGTGCATTCTATAGCTTTGGTTACAGTGATGTTGGTGGCCATAAACTGACATTGTATA
AACTATGTTGTCTTCTTTGCTTAGGTTTAAAATATGACAGAGAATGGCTTCTTCAAGGAT
CAGGTGGTGAAATTTTGACACAGAAAAAGGTAACTGAACTATTCCTGCTTTCTGTATGTG
TGCAACCTTACAGATAATACTTCAATGCTCTCCCAAAAGATGAGAGCCAAAACTTAAAGC
ATATTGAGGGCACGATTTTTAACTACACACTACCTTTTCCATTTCGTTATTGAGATTTCT
TGAGCCCTCCAGTAAAACAAATAGCATGCTTTCACAAAGTGAAGACAGATTATGCATCCT
AGACATGAAGAAATCAAACTTGAATAGTTTAGCCTTTTCACATTGTTTTAATATTTTGTT
CAATGTTTTCGATGTTTGCTGGATCCAAATTTTTAGTTGACGAATCTGTCTGTCAGGATG
TTCTTCTTGTCTTAGTTGAGTTTCATATTCTTCAGGTACCAGAGTTGGGCTCTATTCGCA
CATTGATTAACCTGGAACTTGGGAAGCTCTTCGTAGAATCACCCAAACGGAAGGATAAAT
TGCAGATTTCTCTTCTGGAGAATTTGACTCATTTAACTGCAGAAATGGATGTGTATGGAC
AAAGGTATGATTGGATAAATGTTTTTACAATTATTTGATCCACTTCTTCCATTCACCATT
TGCATTTGGTGCCAGATTTTCTGTCACTCTCAAATTCTACTGGGAACTTCAGATTTAGAA
TGATCAATAATGCTCGGAATTTGCTTCAGGTACAAGGTAGAAAGCTATGATGACAAGGTA
AACACATGGTTCAGCGAAGCTATTGGGCGTCATTGTACTTTCATGAGATGTTCAAGCTCC
AAGAACAGTATCTGCACATCTACTGGCAAGAACGGTCGTTTATGCAGGGATACTCGAAGC
AAACTTAGTTTTGTGAATGAGGGACAACTGCTACTAATATCTGAAGAGAGTGTCTCTGAT
CTCAACAGTCGGCTTAGTTCAAGTACGCAATTTTCCTTCCCTATTCCCTACTCATTGTAG
AAGGACCAAAAAGGGCTATAATTATTCATTGAAATGATCTAGCTCTTGCAGTTTTGACTG
CTTCAAAAATATTATGTATAGTTGAATTTTCACACCATTTTCTTGGGATAACATGATCTA
AACATTTTCCAGGCAATGGAAATGGTACGCAGCACGTTGTTGTTGATGCAATGAGATTTC
GCCCCAACATCGTTATCTCTGGCTCGACGCCATACAGAGAAGACAACTGGAAGAGGCTTC
ACATTGGAGATGCCTATTTTACTGTAAGTGTTCTTTTCCTTTCAGTATCTCCATCGACAG
AAGGGCTTTTTGTGTACACAATTGAACTTCCTCGTTATAACTTCAGAGTGATTAAGGCTA
GCTATTTAGACACAATTGAACTTACACATGCCCACCAAACGTTGTTTAACTACTCATTTA
GTTTGTCGGATGGATCATCTGCAGTCCATGGGTGGATGCAACCGTTGCCAGATGATCAAC
TTGCACCAGAATGCGGGCCAGGTGATCAAGTCAAAGGAACCGCTAGCAACGCTAGCCTCC
TACCGACGAGAAAAGGTGAGTTGCCTACATGTTCAGTGAGCGAGCCGGTGCTTGTGTTTC
TGGCTATGTAATTCTATGCTTCATATGTTTCCAGGGAAAGATTCTGTTTGGTATCCTGTT
GAATTACGAAGATGGTTTGGATGGAGAAGAAGAGACCGTCGCGGAGAGATGGCTCCAAGT
AGGGCAAGAAGTGCACGCTTCGACAGAGTGATTAAGTGTCCAGCTACGCACGCGGAGTGA
TGTCTATATGTAATATTTTTGTATAGAGACAGCCTGCCTTTCAACACCGGAAAAAGAAAC
TAAACGTACAAAACATGTTTAGTTCTAAGTGTACTCTATGCAATATTTTTCGCTCATCAC
TGATTGTTTCTGTGAACAATGCAACAGTTGTATCTGTAACCACCAGTTGTACACACTGAA
CATGTAAACAAACCAAGGAACATCACCCGACAAAAAAAAAGGAAACATGATGAACCATGA
ACTCATGAATCATGATGATTCCAGAACTGAATTTGTGTATCAACTATTCAAGACAAGACA
AAAAGGGACACTGAGACGTCTCAGTGTGATTGCTCAGTATGAGCAGTGACAAGCTTCAAC
AGTACAGTGTAAAGGGTATTACAGGTAGGACAGCTAAGTAACATTTCTTACATCTTAAGC
CTCCACCAGAGGTTGATGTTCATAGCAGCAGTAATAACATCTACCGTTTGTATGTACGTA
ACATTGCATCACGGTGAAGGCGAAAGTTCGGCGACAGGTATATGGTGGAGCGACAAAAAA
ACAGACATATCATTCAGGCGCGCAGCTTCAAAGGTTGAGGACTGATATATATCAACATTT
GGATTGAGAACTCTTGCCGTTTATATTCAGCTCCCCTCCATCAGGTCTCCTCCTCTACAT
GAAATAGATCTCCTCTGATAAGTTTCCTGTGTTATATGCGTTCTCAATAGGTCAGCGGCA
AAGTAATTTGATGCATGACAAAAGAGGCTGAACAAACAAAAACAATGGCCAAGTATGCGT
TCATTTAAGAGAAGTCGCAAACCTTGGGGCGTTAGGCTGCTCATCAGACAAAACCCTCAA
CAACCGCTCCTCGAATGGTGTTGTGTGCCAGCTGACCTTCTGATCCTAACATGAGAGACA
TCTTAGAACAGTTAGCTCGTGATAATCACAAGTTAAGGTATGCATCAGACAAAACCATAA
ACAATCTGCGTCATACCTCCTTGTATTTATTTGTTGTATTGGGAATGCCGTTGCCATCCC
ATGCCTTGGGGAACCTTGGAGTAGGGTTCTCGACATCTGCGTCCATTCCAGAAGCTGCCG
TGAAGACGGGGCTCTCTGTGAAAAGCGTGTTCTCATCGCGCGGTTGGTCGGAAGCGGATG
AGCTGACAACACCTTGATCCTCACTGACTGTGGATAAAGGTTTTAGCCAGTGGGTCAGAC
TCATCGCAGCATGCTTTTCATCTGATATTGATTTTGACAGAGCTCCACCGTCCAATAGAT
TCGGGCTTCTGGTTTGGCACTTCGACTCCTCCGAAGGGGGTGATCCCTTCTCTTTGTGTG
AAGAATTCTCAGTGGGATAACTGAATGGCAGAGATTTCAAGAATCCCACCTTAGCGACTG
AATTTGAAGAGGTCTGCTGCAGTTTCCTGATATGCTTAGGACTGCTGGAGGGCAGCATTG
GTGAAGAATCTTCTGGCAGTTCCGTTTGCTGAAGCTTGTTCTCAATCGGTCTCAAGACAG
GATAGACAAACTGCTTGCGGGTGCGCACACGCTTCCTGGACATAGTAGACCCTGTGTGTG
AAGTATAAATTGTTCCAGGGGTTTGCATCTCGTCTCTGAGAACCAAAGGTGTCGGGAAGG
GTGAACCGTTGCAGTCAGACAACCTATTTTGCATTCTCCAGAATGGGGACTTATCATGGA
GAACTGATCGAGGGACAGAATCAAGTAATTTGTCTTGTGAAACTTCAAGTTCAGTCATCA
GATCCTCCTCACATTTTGAGCTGAAAGGTTGGCATACGACATCGATTATATATAATCTCA
TCACAGCCATATTAAAGAAAGTCCAAACACATAAGAAAACTGAGGCAGTTATTACCGTTC
GGACGAATTAAATCCAGATAAAGATGTTGCTCCCATTGCAAGTCCATTGATGGACATGTC
ATCAGACTGCATGTCCAAAAAGAAGTCATCAGTCATCAGAGAAATGAAACTAATAACAAA
ATGATCTCACAGATAATGTCCCCACCTCATTAGCGGATTCAGAATTACTTTCATATGACA
CATTTCGAAGTTCAGCCGGGGTTTGCGATATTGTGCCATACAACTTGAGGTAATCTGCCT
GTGAGGATTTAAGAGCCACATGAAAATTCAAATGAGGATAGAATAAACGCCTTAGTTCTT
GGAATAGTTTACATATTCCCAATATCTGAAAACTAAGTCAGGTACTGCCAGAACGTAAAA
AGGAAACAAATGCAGAGGATAAAACTATAATATGACAGAACAGACTGTACATGTGGCTGC
AGATCAATAATATCAGCATCAGTGAGCCAATGAGATAGGACTAGGAGCGATGAAAAATTC
TGGACTAAAACCATATGTTCCAATGCTTTGTTTACTGTATTTCTGCAAATAACTAGTTGT
TGGTTTTCTATGCTTATATGTTATGACCAAATGAACTGGAATTTTCATGTAATGGGTATA
TATATGGTCAATCATTCCTTTGATATGTTCTGGTGAAAAATAGAACCTCCAGTGTTCTTT
TTTGACTGCACGAAAGCAAATGTGCAGCTGGGGTAGCTAATATACCCACAGCTGTTTGTG
CATTTGCACATATGTGAAGTATATCTGTAAAATATTACTCCCTCCGTCCCAAAACAAGCA
AGTCACCAGAACATATCAAAGGAATGATTGACCATATATAATACCCACTACATGAAAATT
CCAGTTCATTTGGTCATAACATATAAGCATAGAAAACCAACAACTAGTTATTTGCAGAAA
TACAGTAAACAAAGCACTTGTCATCGAAAATTATATGCCACAACTAGTAGTTACAGTGTG
ATGTTGGGTAAACATAAACCACTCATATAATGCTCAACAGAGAACTACAAGCACAATCAA
ATTCAATATAAACTGCTACCTTGTAGCAGATGGAAACCTAAAGGTAACACACATTGCAAC
CAAAAAATGAACCTTTAAAATGATCCGTCGAACTACAATGGGACCGTCAAAAAGGTCTTA
CACAGACATTCCCCACATGTGTGACACAGAAAAGGGACATGGGTTCATTCAGTTATTAGC
TACTGCGTAAACTTAATAGTATCTCTCCATCTAAACTGTCCACATACATTGTGCGCTGTG
GGGAAATACAGTAACACATATGTAGTCACAAGATGAGCCCGGAACTACAATCTGAAGTCA
CAGTAAGCAAGCGCGCACCCACCCACCCCGCATCGGTGACCCAAAAATGGGACATGGATT
CACCTACCTGTCAGCAGGCACCGTGTAAACTTTAATCTCGATCTACATCTAAACCATCCA
CACACACACACACATCACGCGCATTGCAGAAACAGCATATTCATCAGTGTCATCGCACAT
ACCTCTCGCCTAAGCTCCTCATCAGTGTCATCTCCGTCTGCAAGCAGCTGCTCGTTGGAC
CCGGTGCTCTCCGCAAAACCTGAAACAACACCACGCACGCATCGAAACGAACGGCGCAGA
GGTCAACCACAGCACACCGGACCAAACCAAACCAAACCATACCGCGAAATCACGAATCTG
ACCGGGCACCTACCTTTCTCCTCGTCCGAGGCCCGGAGCGCGTCCCCTCCCCGGTCCTTG
TGCACGGGCGGATCCTGCGCAGACGCGAACGCGCCGGAAAAAATAAATAAATCGTCGCCG
CCTGGGCCAGGAGCACGGAAGAATCGAGGGGCCGCAGGAGGGTGGGGGAGGTAGGGTTTG
GCTTACCCGGTTGGCGGAGGCGGGGCTGTCGGGACCGGGGCCGGGGCGGCGGAGGCGGAA
CCAGGAGAGGAAGCAGTCGACGAGGACGGCGTCGAAGAAGGCCACCACCGCCCTCACCAG
CGCCTCCGCGCACCCGCACATCGCGCCCCCCGCCGGCGGCTAGGGTTCCGCTACCGCCGA
CTCGCCGCGGGATCGGGGACGGGATGGGGACGGACGGACGGAGGAGGCGGCCGTTCGAAA
TGGGAGACACGGGGGACCGGAAAGAGGTAGCCGTAGTGAGTGAGATGAGATAAACTCGAA
TGAGCCCGGGGCGACGGGCCAGGCTCTTCCCCGCCCCCCCCCGCCCCGCGGCCGGGGGG