| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_119189
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_2158 |
1 |
513 bp |
MLOC_2158.1 |
Available |
Available |
LOC_Os07g29620.1, FRAME:+2, EVALUE:4e-95, 13107.m02977 protein OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed |
CDS Structure of MLOC_2158
Contig Sequence (1920 bp)
>contig_119189 1920 assembly3_WGSMorex_rbca.fasta
CCTTATTTTTGAGTTGCAATAAAGATACAAAAATGGCCTTCCGTGTTTTTTCTCATAAGT
TCATTGTGTCTTTCTGCATGTGATTTTGATAGGCCTTCTTCAAGGAGCACCCGGAGTATG
TTGAAAATGATTTCTACATAACTGGGGAGTCATATGTTGGGCACTGCATTCCTGCCTTTG
CAACTAGGGTGTACAAGGGGAACAAGAACAATGAGGGCATTCACATCAATTTGAAGGTTT
AGTCATCTCTTTCTGGGCTTATCCATACTGTTATGTGTTATAAAGGGTTTTGTCGCTTGA
ATCCACCCTTGCTGTTCAATTTTCAGGGTTCTGCGATGGGTAACGGACTTACAGATCTAG
CGATACAGTATAAGGCATACACCGATTATGCATTGGATATGGATTTAATCACACAGTCAG
AATTTAACAAGGTCAATAAAGTTGTTCCTGCTTGTGAATTTGTTGTCAAGCTTTGTGGTA
ATTATTCCTAGACTCCTGGTTTGCTTGTGTGTAAGTCTCTAGCATTAGTCAATTTGGCCT
CTTGGAGGCACTGTTCATTAACATCATTCCTTGCTTTGGTGTGCCAATTTCTTCTCAAAA
CAAGAAAAGTCATAAGCCCAACTCTGATATACCTCATAACATGTATGTATCGAACTTAAT
TTTATCTTTTGTTTGAGGTACCTCTGGCACTGTATCTTGCCTTGCTGCCTATTTTGTTTG
CAACACAATATTCAGTTCCATTAGGTTGATAATCGGGAACAAAAATGTAGTGTAAAATAC
AAAAATTTATTTGGTTCTTCCTTGTTTTTTGAAGTTTTCTGATTGATCACCTCATCTTTG
CAGTATTATGACATCAGGAAGCCATGTGTGGGGAGCCTATGCTATGATTTTTCTAATTTG
GAGAAGTTTCTCAATCTGAAATCTGTCAGACAGAGCCTAGGCGTTGGAGACATAGAGTTC
GTCTCTTGTAGCCCGACTGTCTATCAGGCTATCAGGTTATGGATTTCTGCTATTTTAGGT
GCAACGATCAGTTGTACTGCAATCCAGGAATGCAACAGGACGGGACAATGGACGACGATG
GTGTTATGAGTGCTGGTCGGGTTTTGGGGCAAGGTGCCGGTGACTCTATGGGTTGTTTAA
GATCAGGATCTTTAAACCCCCCAGGTTGTCGTGGGGGGCAAATGTTGTAAACAACGCGAG
GTTAGTTATGCTTCTCTTTTGCCATTTCTATACATCTAGGAACATCAATTTACTTTGTGT
GAATTTCTGTTTTATGGAACTGTATCCTTTGAAAGACACGATATCCTTTTTAAAAAGATA
TGATAAGATAGGGAAGGTTGAGTTTGTGTTCTTTCTCCAGTAGCATAAGAACTGATATAA
AAATATTGACAATTGTATAGGATAGAGCCATAGACGAGATGGTGTTCCAAGATAGCTTCT
CTTATTTCTCTAAATTATACTGCCGACTTTACTATCAGTGAACAGGGTCTTATTTACGGG
AATCTTTTAGGTCAAAATGTGAATTTGATTACCAAATGTTGGTTTTCTACCTACTAGAAC
CAACATTGTTTAGGCATGCCCTTAATCATATATTTCACACAAATCTGTGGCTCGATTGAG
AGCTCGCTGCACTAAAGGATGAAATTTCTGACATTACCAATCCATAAACTGTAATTAGTT
TCCTTATCTCGATTATTGAAGGGGGATCTGCTGTCGTCGTGCTGGTTCAACCATCCTCGC
ATCCCTCGATTGCGCGCAGAAAAAAATTCCTCCTTCGGTCATCCCGTCCTGCACGCACGA
GAAACCCAACCCGAAAAACGTGCCCACTCTCCCACCCATTGTCGCTCGAAACAAAGGAGA
ACAAACTGCCGCAATACAAACATGTNNCGCTCCACCTCTCCCCAACCCCTCGCTCCCAAT
