Map Locations of contig_11817 (3773 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_11817

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_2053 2 964 bp AK249886.1 Available Available None





CDS Structure of MLOC_2053






Contig Sequence (3773 bp)

>contig_11817 3773 assembly3_WGSMorex_rbca.fasta
TAAGAATTGTGCTGTTCAGTAAATTGGTTACTCCAGCTAAAAAGTAGTAGACCGTTTCCT
GGTCTGTTTTTTCCCGTTTTGCTTGATAAAAGCAAAAGCTTGTAATTTGTCCTTGGTTGT
AGCCAAGGGTCGGAATGATTTTGCAGTAATTTAGAACATCTAGCTTAGCATTTATTTATT
GTGTCACGTGCATATTTGTGGATAGGTTATATGGAACTGATAAATTTTTATGTGTTCTCT
TTAAACTTCATTCACGTTTTCTCTTGTTATGCAGGAATTGCATGACATTCCATTATTTTT
TAGTCTCCATAACATATCTGGGACTGTGAAGTGCACATCACCATCTGCAGTTATGTTCCG
GTCAGCAGTTATAAATGCAGGATATCAGATATCAAGCAGTCACTGTAACCCGCTCGGGCT
GAAGTCTGATGCCCCGTGGGATGTTATTTGGGACATCATGCGCTGCTGGGTAAATATTGG
TTGTTTGTGACCTTTGATCACAACTTCCATTCAGTATGTAGCCTCAAGTACCCCATGAAC
TTGTATTTACCTTATGGCTTTGTGGAATATTTGAATGCAGGTGAAAAACCATCCAATCAA
GGAACAGCCGCGTGATTCTGCAGGCACTGCAATCCTTTCTAAATCTCCACAGCTAGAAGT
ACGCTATTTGTTGAGATTACAATGTCCCTTGTATGCTTGTATGTGAACAAAATTGTATTT
TTACTCCTCATTTTGTGTTTTCATCATAGGCAAATTTCTCTAGAGCAGTTGCTGCCCTCA
GCAAGGCTCAGATGAAGAAGGTGAATCGGTTCCTTCCAAACCCAGAAAGTCACTGGGGTC
CAAAGGTCAGGGCAGGTCGGAGAATTACAAACAAGCATATCTCCCTGTTAGGCGCAGAGG
CTACCAATGAAGCTATCAGCCGCCAAGATGGAAATGGAGCGGTGACAGATAAGCCAGGTT
CAGATACAGGAGCGACTGTCACAGACGAAGAGAATGAACCTTCAACCAAACGCCAGAAAA
CCGATGATGGTGAACCCGCCAGCGAACCTTGATTGACATTGTCATCGTAACTTTTTGTTC
GTCAATCTTGATATCACTTGTTGTTTCTTTCTTGTGAGCGAACAGACTATTGATAGTACC
TACTGTGACATGTTTTGAGCAATGAATTTTGATCAGGCAATTTTACTCTATAGTTTGTCA
TTTCATTTTAATTTATTATTTGCCAGTTGATGGTGATTAAGTAGCTGTGACATGTGCTAT
ACAAACGAAGCTATACTTGTGCCTAACCCAACAGACCCTGCCCATCTGCCAGAGCGTCCA
GACACGCAATCTGGGCCTCGAGAGAGCCCTTATCACGGCGCGCCTCCGCCGCTCTATTAT
GAGACCAGCCATGCAGAAATTTACGGATCGCATAGGAGCACTTGTGCCGGTCATCCATGG
GTCCCAAGGACCGGCGGCAAGACGAAAGAAGCATTTACGGATCGCATAGGAGCACTTGTG
CCGGCCATCCATGGGTCCCAAGGACCGGCGGCAAGACGAAAGAAGCCCAGAGAGGGACCG
GCGGCAAGACGAAAGAAGCCTAGAGATTTTTGAAGCTAACAGCTTCGAAAAACCTTGAAC
GAGAAGCCACGACGCGTCGAACTAGAAGCGAGACGGGATAACGGGAGCCTCCAAACCTGT
GTCGAGGATAAGAGGTGCATGGTCCGAGCCCACAATGGACTTGACTTTAAGAAAAGCGCG
AGGAAACAGAGAATCCCAGGAAGGACAGATAAATGTTCGATCAAGAGGCGAACGAATAGG
GTTAGCTTGACCATTAGACGAGGTGAAGCGGGCTTCCACCTTTGGAAGTTCTCGAAAAGT
GCAATCACGAATGAAAGAGTTGAAGGCATCAGCCAGGGGCCATGAAAAGTTACTAGAACT
CTTATCCGTAGGGGAGCGAAGGAGGTTAAACCCCATCAACTAGCAGAGGAAGCGCACACG
CATCAATTTTATTAGGGAATGCATCCAGAAATAAGTAGCGAATCCAGAAATAAGTAGGAC
AAAGAGTGGTCCGCAGGATCGTAAACAACCATGATTTCGAAAAGTCGATTAAGACTTCGA
TGATGCACCACCGTGCTGGCTCAAAAGACACCGTGATCAAAAGCCACACGATCAAACACA
TCGCGCTTGGTACCCAGTAGGATTCCGTCGGAGTGGCCTGAGGAAGGAAGGAAATTCCAG
TTAAATCTGTCCATCCCCACAACCGCAGAGAATTCATTAGGAGAGAAGGATACCTTGAAA
GTTTCAACAAGCCCAATAACATCAATGTTCTCACCTCTAACAACATTCCTAATTTGGTCA
CGGCGCCCCCTAGCGCCGAAGCCTCTAATATTTCAGAGTAGGTCTCTCATTTGAAAGAAA
GATTTTTGATACGAAGACTCGACCTGCGGGGGCAACGCAGGATTTGACACGCTTAGAAGG
GACCCGCTTAGAAGGCGGAGGTGCGGCCTGACCACTACCAGTAGCACCCACCTCCACACT
CGACTACCAGTGGCGGACTTCAGCACAGCCATCCTGGATAGCCGGCCCTGACTCACAAGA
AAATTTATGTATACCATGTGGTAATTAGCCTAGATATGCAGCAAAACAAGTGCGGCCCCA
ACTGTTTGCTCAACAACATCAAATGTGAGGCAAGACTCGGGACTCAAATATTCCGGGTTA
GTAGCACCACATGTAACTCCATGTATTGTAAAACAAACTATTATCCTTAATTAATAAATG
AATAAAATCTTTTGTCTTCGTTTCAATTCAGTGGATAAAGATATTGCGTCAGGAAATTAG
CAAATCATTCTAAACCAAATCCTAAACCCACTGCTTTTCCTTTGCCAAAATGTAAGAGCA
TCTCGAACAAACGGGCGGTGGCGCGGCGCGCTAAATTTTTATAGGCACCGAAATAGCATT
TTATGGTGCGCGGACGTTGATAATTTAAGTAGGCGTTGTAAAATTTAGCGAGCTACAATA
GCGCTTCACCACACATGGTAAAATACACAACGTGCATTCAGCCGTCGCTTGGCACATATA
GAACATCACATATCAATTTTTGATAATTAAAACAACATGATCTTGAACTTTAAAATTAGC
AAAATGATGAGTTGAGGAACATAGCATAGTTCAAATTCATGACATAGTTCAAATTCTTCT
AACCACAAGGTTCACACAAACGAATGAAACATCAAGAATCACGCTCCATCTTCTTCCTCC
TCTTCTTCCTTGTCCTTCTCCTCCTCTTTTTCCTCCTCTTCATCATCTTTAAGAACCTCA
GTGTCAGTGGAACCTCGGACGTCTTCGTCTGCAGGGTAGTTGCACGCCCTTTCTCTCGGT
GCATCAACCATAGCCTCACCCTCCTCATTCACTTCATATTCATGATATTCTTGATTCACT
TCATTGGTTTGAGACCAATGAAAATTGTTGGAGCCAACACCTATAGGTGACAAATATGCG
TCATCATTGAAACTATAAAGTATGGTAAAGAAAACTAAATCAAGCTAATAATATGTACAC
ATTTCTAGCAACAACAAAAAAAGAAAGAATAAAAAACCTTACCTTGCGGCCATTTCATCG
AACACCATTTGCGCGTCGGTCGCTAGTGCACCAAATTGCGATGGGCTGCAGAGGAGCGGC
GTGGTCTCTGATGGGGACGCGATGGTGGGCGCGGCCTTCTCCCCCTACCCCTCTCCCCAA
TTTCCCCCTCTCCTCTAGGGTTTCGCATCGTGTCGTCGTTGGGCTGCAGAGGA