| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_117565
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_1973 |
1 |
974 bp |
MLOC_1973.1 |
Available |
Available |
LOC_Os06g35700.1, FRAME:-3, EVALUE:3e-137, 13106.m03686 protein reticuline oxidase-like protein precursor, putative, expressed |
CDS Structure of MLOC_1973
Contig Sequence (2531 bp)
>contig_117565 2531 assembly3_WGSMorex_rbca.fasta
GGGAAGCGGCTGCGCATCAGCGGCAGCAGCGTGTCCGACGTCCCCAGGTACATGGACTGG
AAGTTGGCCTCCTGTTTCTGCGCGAGCACCCTGATGAAAAGGTCTTCAGGGAGAGCTGGG
GCGACTTGTTGCCATCTGGTGAGGACGTCCACGGCGCCCTGGTCGACGGACTTTGTGACG
TTGAACATTGTCACCGTCGGCGGGACGGGAACGAGCTTCACCTGCCACGAGAGCACGATG
CCGAAGCTCTCGCCGCCGCCGCCGCGGATGGCCCAGAACACGTCCGTCCCCATGGCCTGC
TTGTCCAGGATCCTCCCATTGGCGTCGACGAGCGTGGCGTCAAGGACGTTGTCGATGGCG
ACGCCGTACTTGCGCAGCAGCATGCCGAACCCGCCGCCGCTGAAATGGCCGCCCACGCCG
ATCGTCGGGCACAGGCCGGCCGGGAAAGCCAGCAGGTTGCTCGCCTTCGAGATGGCGTAG
TACAGCTCCCCGAGCGTCGCGCCGGAGTCCACCCACGCGGTGGCGGACTTCTGGTCGACG
CGCACGGAGCGGAGGTTGGCCAGGTCGACCACCGCGAACACCTCGGGGCGCGCGGACCGG
TACGAGAGGCCCTCGTAGTCGTGCCCGCCGCTGCGCACGCGGACGCGCACGTCGTTCCGA
CGGCCGCAGACGACGGCGGCCTGGACGTGGGAGGCGTTGGTCGGCGTGACGATGCAGAGC
GGCCTCACCGTGCCAGGCGTGGAGAACTTGGGGTTCCGGATGGAGGACACCAGGACCGAG
GTGAACGAAGGCGAGCTCTGCGTGTATAGCAGCTGCTTGGGTATGGCCGCCGAGAGGCAT
TGGAGGAAGGCGTCGGAGGAAGCTAGGGAAGGGACGGATGCATAGCAGGAGAGGAGGCTG
AAGAGGAGCGCTAGAGCTAAGCTCCGAGACGAGGTCATGGCTTGTTTCGCGCACTGATCT
TCTTGGAAAGAATGGAGCGTAGACGAAACTAATTGGCTCCTTTGGTCTTGGGGTCGCATC
CATATATACTCCTATATGGGATGTACGCCACTGGGCACCATTATAGAGAATTACAGATTG
ATTCGGGTGGATATGTCCAGATTCATACTCTTGCTATACATGGAAGGTAATTTGGCATTG
ACCACCGAATCACATCACACCAGACAGTATCATTTAGTACTGCATATTCTAAGAGTTTTC
TTTTCCCTTGTCGCAGACGATGCAGTGCTCACTGTTGTTGTCCCAATACTTGCATGGTAT
CGCGTTGTACAGATGGTCTACTTTGACGAGTTGGACTTCACCGTCCATATCCAGCTAGCA
ACACTTTACAAGTCCAAGTTATGGTCAACTCCCAAGTAGTGGAGTAGTCGATCTAAATAG
ATGGCTGGGGACTAGCTAGATTTATATGAGCGCTGTAGGACACAATTTTGACTCTGACCA
AAAATAACATGGATATTTGAGCAATCAGATCGTTCGGTTGGCACAGCGGCATCCGTGTGA
ACATAGTAGACCATGGGTCGTCTCATTATGCATGCTGCGGATTCGGTTGGAAACTTAGGC
CAATTCCAACTCAGGACTTCAAAAAGACTTGTCCGTTTCATCTGCTTTTCGTTCGTTTAA
AAAAGTATAATAGAATTGTGTCTCTTCGGGTTTATGGATGCGCGTCCGTATACGTAATGT
CTCACCGTATCTCCTTCGTTGTGCATGCAAATAAAAAAGAAGAAAATATGTAGTTAAATG
GCAACGGTCATAGTTCACGCGAGCGACCACGTTCATGTCAGTTAATACCAACCGGCAACA
AAGCCGTCGGCCTATAGAACGATCATCCAAATTTTGGCACCGGCAACAAAGCCACCAACC
GACACACAATTCAGTCTTCAAAATAAACAAATTTAGGGCAAGCAACAAAGACAGCGGCCG
GCTCACGAGCCAACCTTTAAAATGGACAAGTTTTTGGCGCCGGCAATAAAGCTAGCAGCC
GGCACACCATCCAACCTTCAAAATGAACGGCCATCGCGGCCGTGGTCTCACCTAGTTCAG
GCCGTCGCGGGCGAACATCTCCTTCTGCCGGTTTGCAAATCAAGTCTTCCTCTCCAATGA
CATGTTTTTCTTGTCGACCCTCATGAACGCGAGTGCGGTCATTTTTCTTTAGTCTCAACA
TTGGTGGCCTCAATCTTGAGCTTCTTGAGTTGAGCGGTCTCCTCGATGTCAAGCGTCCCC
TTCTTCACGCCTCCTGCATGTCAAGCTTCTTCTTTCAGAGATCTAGGTAGATGTTCATTG
GCTCCTCCTCTCTTCACTCACTTCCTTTTGGCTCATCATGTCTTCCAATGTTCCTTGCAA
GGCTATAGAAGCCGCATCACTATCACACCCTATGTGTTGGAAATATGCCCTAGNNNNNNN
NNNNNNNNNNNNATTATCATATTTCCTTGTTCATTATTATCGTCTATTGTTCATGCTATA
ATTGTATTAACTGGAAACGTTAATACATGTGTGAATAAATAGACCCCAATGTGCCCCTAC
CAAGCCTCTAG
