Contig Data
morexGenes
Links



Map Locations of contig_117386 (4950 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_117386

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_1947 2 552 bp MLOC_1947.1 Available Available LOC_Os04g01230.2, FRAME:+2, EVALUE:3e-65, 13104.m00027 protein phosphoglycerate mutase, putative, expressed





CDS Structure of MLOC_1947






Contig Sequence (4950 bp)

>contig_117386 4950 assembly3_WGSMorex_rbca.fasta
ATATCATCTTCAGGACAAATATCGAAGGTTATTTTCATATCCTCCTGAAATCCATATGCC
TTGCATAGAGCTTGCCAAGTTGAGCAACCAAAATGCGATTGATTAACTGCATTGTATAGT
TTAACCAGAAATGTAAAAACCATATTTAGTCCTTAGGAGAGCTCTCCTCATCTCCATATT
CTCCATTTCTTAAAAATCGAGCTTCTCCAAGACATACCGTCTTGCATGGCAGGAGATGCA
CTAGTCGAATTGTAAAAAACAGAAATTACAAATTGAAGCAAAGAAACAGAAAGCAAAGAA
GCAAAAATAGTGGTCATCGTTGCGTACGGTAAAAACATCAAAAGTCTCGTCAAGCTTGAT
GGTGAAGAATCTACCATTTTGCAGGTGAGGCTTGTCACACAGACCCCGATCTTCATCGCA
ATAATCACACTCAGGTATCCCTCATCGTCAGACTACATTTCCTATGTTCATGATTCAAAG
ATTAAAAATCTACGACAACTATTGATGTATATGAAAAATCAGCATGGGTTGAGTTTCGGT
CTGTCGAGGCTAACTTGAAAAATTCTCATATCTCATGGTGTATATGGTGCACGCACACTC
ACACTGATATGATGGTGTATGTTGGTGTACACTCCCTCACACTACTATTTTGACCGTCGG
TAATAACCGCTCCTCCCTTCGTTCCCGCGTGCATTACCAAAATCTCTAGCACACAGGAAC
GAAGGAGGAAGCATCCCCCGCGACAACAGCCGGGATTCTTCCTCTGAGATTTCGACTATC
GGTGTTAGTTGCTTCCTCCTCTTCTTCTCTCCCTCATACTAATATTTCGATCGTCGGTGA
TGGTCTCACCTCTTCTTCTCTCCTTGCGCATTGTACCAAGGTCTATATGGCAAGAAGAAA
AGAAGAGGAAGCGCCGCCCACGGCAACTGTCGGTATTCCTCCATCAAGAACATACTAAAA
GTTACACAAGGAGATCCAACAGACCGAAATTCACCCAATTCATAAGTCAAATAAAATTAC
ATAAAAATGACCATTGCTAAAATAGGACATATCGAGCGCGTGGAATTTCTCTAAACGGAA
ATAAATCAACATTCCGGAAAAACATACGCACTAGGAGTTGCTCCCTGCAAAATGATACAA
GTATCACCAATAAATTGATGCAAAAACATTCCATAGCAATATTACCACGATGAAGTACTA
ATATCCATATATATGCTTCAATCCATCCATATTACCATCAATCCATCTAAATGCATCCAT
TCATCTAAATGCACACATTCATCTAAATTCATCCATCCATCCATCTAACCATCGAAATGG
ATCCATTCATCTAACCATCGATCCATCTAAATGCATCCATTCATCTAAATGCATCCATCC
ATCAATCTACCCATCTAAATGCATCCATTCATAACCATCTAAATGCATCAATTTGTAACC
ATCTAAATGCATTAATTCATCCATCCATTCATCTTATCTAGCAAAGCAAAAACAGAGGGT
GGATGGAGAAGGGGGAGAGTGAAAGAAACGAGGGAGGGAGAACTACTACAGCGTGGATGA
CTGGGACAGGGAGGACCGCCGCGTGGGGAGGGCCGGTACTGGGAGGGCCGACGGGATGCG
TGAGCAGCGCCATCGCGAGGGAGATAGTGGAACGAGGGGGAAAGAGCGAGGAGTGAGGAG
TGAGGGGCGCGAGGAAGAAGTGGATAAGGTACGACCTAGGGGTAGCGCGTGTAGGGGATA
TGTTCTACTTCTAACTTGGAGGAGCAGAGGTGGGCCTGGCTAGCCACAGTAGTAGCACAG
GCTCATGGAAGGCGCTACTGCTAACCCCATTATGAGTAGCGTCGCTCGTGAGCCGGCTCT
ACTACTGTGGCTAGCCCGTGTGCAAATGGTATCCCACACCTAGCTATTAATAGCGCCCCC
TAACACTGGCGGTGCTACTGCTACCGATTACCAGTAGCATGTTTTTTGGCCAGCGCTACT
ACTAATTTTACCCAACTCTACTCGTAATATTCTACCTATAAGCTTTTCCCTAGTAGTGAG
AATCATATCATTAGAAATTGCAGAATTGAGAGCCCCTCCTTAACTAGATGTGGCACTACT
AATGCAACTTGGTCATCTTATGTAGCAAACTCTATCAGAATGGCAAACATATCAGCATCA
TTGTTAAATACTATTAGAGAGAGTGGATCGCCCTAACAGACTTCTTTTTTCATTTTCAAG
TGATGCCCAACATATCCATTCCCTTTTATGGACATACTATCACTAGGAAACTAATCAACC
CATGCAACCCATTTCTCGGAAAAGCTCTTCATTCTTGTGTTTGCTAAATAGAAGGCCATT
CGACTTTGCCCTAATACTTTTCAAAGTCAGTTTTCAATTCCATTGTTCCAATTTGCGGAA
TCACATATGTGTCTTTTAGTAAAGAATTAAGTTCCGATGGGAAAGTTTCGAATCTATCCA
ACTCCATCTCGTGATGATGCAACTATGCCTTTCCCTTGTTGTTATCTACCCAACTCCTAT
TTGGATAAAAATATATGATTGTTGATTTCTGTTGGGCAGAAATGGAGGCTAGTGCCCGCA
CTGCTATGTATCCTCAGCACAGCTGCAAAAACATATACCTGGTACTACAACTCCTCAGTT
TTAGTCAACCAACTTGTATGAAACATGTAAAGAATGTCCCATCTGGTTAACTATAGCAAA
CATGTGCAGGTGAGGCATGCTCAAGGTATTCATAATGTGGAAGGTGAAAAGGATCATAGT
GCCTACATGTCGCCCGCATTGCTTGATGCTCACATTACCCCTTTGGGCTGGAGACAAGTA
AAATCCCTTGTTTCTTTTATGTTACCATGTGTTGTCATATTTCTAATAAAAATGGTACAC
ATTATGTTACGGGAAACCAAGGTGGTGCCTTTGTCAAATATTTAAGGCAACAATGCCACT
ATGATACTGAGACGAGCATGACAAATGGAAGAACAAATGATTTTTCTATTGTCTTTCATC
ATAGGATTGGATGGCAGCATGTATGTCACTATCATGTGTTGTGCTCATGGTATCAAGCCA
TAAATGGTATACTATTATCAGACATTAATATTGTTAATATAAAAATGTGTAAAAGTAGCA
ACAAGTCATCATGCTCTAGTGGTAAAAGACATTTGTTGTGCAATTGAAGTGTTGGGTTCC
AAATTCGTTCACTTCACAAACTAACATATCCTGACTTATGATATTCAACCTTTATTTACA
CTGTGAAATCTCTAGTCAAATGAAATTGTGGCAGCGATTATTGGTGTTATGGCAATGTTC
GATGTCTTTGTTCTATCAAATTGCCATTATTGACATCATGAAGAATAATATTTCTTTACT
AATGTAATGTTCATGCAAAATCATATATGTCGATGTTGCCAGTTGGTAGTTCACGTGGCT
CTTATTGCCGCCTTAAAATAAAGGAAGTCACATGTGTTAGCATGAACCTCAGGCGAATGA
TATGTTCTATTTCGGAATAGCATCTCATCATGCAAGCACGGATCCTCATCATGCACCATA
TGCATGGGAATATGTCCACCTCAACATGCACCCATGCATAGAAAAAACCCACTACAACAT
GCAAGTATGCATGCAAATTTTCATACTATTATGTTATTTACACGTAATAGATATTTTACA
AATATAGAGTAGTCAAACACAATAAGTTATATGTATTTTCAGTTTATATTCTAAATCTAA
ATAGCTTTCCCCCACCAAACCATTTATCTCAACATGTGAGCATGCCACCTTGTCATACAA
CATGCATGGAAACAGGGCCACCTCAACATGCAGCCATGCGTAGGACAAAGTCTACTTTAA
CATGCAAACATGCATGCGAATTTCCATTATATCATGCTTTTATACATTTTAAAAATATTT
TATAACTATGAAATAACAAAACACCGTAAGTTATATGTATTTTATATTTTAGTTCTCATA
TTATTACTAGAAATATTTATGTTCCATACAACCAAATCTCTTTGAAATATATTGCAAAGC
ATTTTCGCAAAATGGTGTGGGGTAGCAGCAAGTTAGTCGCAATCCTAGTTGCATCAAAAC
GCAATGACACCTTCTCTTTGGATGACATTGAGATTCCTTTAGTTGATTCATTTAAGGTCA
TGAGCCCATTTGAAATGCTCATTTTGAAGTCCTCATACACATAAAGTATATTGAAATGTC
ACTTTTTTATTTACCATTCCCAATTGAATGGATGCTAATTTACATGCATTTGTAGGTTGA
TTGCCTGCGAGAGCATGTGACAAAATGTGGACTAGACAAAAAGATTGAGCTGGTAATTGT
TTCCCCACTATTGAGGTATATTTTTCCTTGACCTTTTGATCTTTTTGTACATAATTTCAT
TATTTTGTATCCTCTTCTAAACTTTGTAGATTGGATTTTGTACACTAACGAATATCAATG
TGGAGTGCAATCCTTATTACATGTCTTGCATGGCCCATGTGCGTGTAATCTAGTAAAAAT
GAAATTTAGTTCGAGCTCTTCTTTTACACCCTTAATCATGCTTGGTGTGTCAATATGTAC
ATAATCTGCTTATCTAGTATACATTATTGTGAGAACTCCTATGTTGAGGCATGATATAAT
ATGATGGTGCATTACAGTAGTATGTTTTGCTCAATGAGGCTCACAATATTTTATTGAACT
AATCTCACAGGACCATGCAAACTGCAGTGGGGGTTTTTGGTGGTGGGAGCCATACTAATG
AAGTAATTGCATCACCATTATTAATGGTAGAAGGTGTTGGCCAAAGTGGACATGCGGCAA
TTTCAAGTTTGAACTGCCCACCATTTCTTGCAGTTGAAGCATGCAGGGAGCGCTTGGTAT
TCCTCTCTCATGAATAAATACATGACCGTTAGGAGGCCGCGCTCCTGCGACTCCCCCGCT
CCCAGCGGCGGGCCGCCGCCGCCGCCTCCT