Contig Data
morexGenes
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Map Locations of contig_117145 (4365 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_117145

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_1921 2 2062 bp MLOC_1921.1 Available Available None
MLOC_1920 1 105 bp None Available Available None
MLOC_1919 4 1445 bp MLOC_1919.2 Available Available None





CDS Structure of MLOC_1921






CDS Structure of MLOC_1920






CDS Structure of MLOC_1919






Contig Sequence (4365 bp)

>contig_117145 4365 assembly3_WGSMorex_rbca.fasta
AGTACATGCCAATCTAATTATCCACCTCTCCCCATATCCATGCTTTTCTTTTATCGTAAT
TTCACTTGGGTAGGCCAAGATAGTCAGGTTATACTCTAATATCAGAGAACACACCCCGCA
TCCGGCCGGTCCGCAAAACGCGTTTGCAGTTCGCGCAAAATCGTTTTTGCGGGCCGACGC
AGGCTGGCACACATGCAAACCCGGCATAATGGACCAGTAAAAAAGCATATTTGTGGAATA
TATTTTTTTACAGGTCTGTTTCTGCGGGTTCTGATCTGACGCAGCTCCTCCCGACCCGTA
ATACTTAGATTTGTAACTTAAATTGATCTAGCACAATGCTTTTCTTTGCTTTTGCAACAT
CAGATACAAAAGATATTCATCGTCCTACACAAAAGAATGAGCAAGCTCGAAGTGAGCTAC
CGCAAATGAACTAAAGAATGAGCTGTGAAACGAACTACCGCAAGTGCACGTACCCCGTCG
TTTTCGCATTTGTAGAACACCCATCCAGGGTGCTTTGGCGTGCCCGAAGTAAGCCGCAGC
ACTTGACGCAGGCAATCGTCGCATTTTATGAGCGACATCGGCAGGCCACAAAGACGCTGC
GCAAGCGCCGAGCCCGATGGACGGCCGGACGAGTCCATGCCCGCAAACCTTCGACGGCGA
CGGGCAGACGAACCCGTGCATGCATGACGCGATGCGCTTCATGCGCCCTTGCCTGGGCTG
CTGGAGAGGCTCCCCGACCACTCCATCGCCTGGGGCAGCAACCGACGACTGAAAAAAGCC
AAATCCGACGACCCGCGATGAAGGAAGGGAAGGCCTCGTGCGCGTGGCGGCCTTCCGGCG
TGCTCCTACCGGCTGTCGTCGCCGAAATCTTGGACGGCGGCCGGCGGAGACGCAAGGGGG
AAGAGGAGAGATGGGAAAAACGCGGGATGAAATGTACCCCACCAACCGCTTCCGCTTATA
TGCAGGGCACCGCAGACGCGAGGGAAAACCCGCGTTTTCCCGAATTGGGGTCGGAATTTT
GCCGCACCCTCTAAATTTTTCTACGGGCCAGGATACGGGATCTGATCGGGCTGGTTTTTC
AGCCCCGACCCGCATTTTAGCGATTAGTTTACGGGTCGGTCTGCTAGAGTTGCTCTAATG
CCATCAACCCCGATCATCTCCAACCCAAATGCATTTCTGCCAAAGCCATCAACCCCGATC
ATGGCCTCAGTACGAGTGAAGTCGGTCTGCTAGAGTTGCTCTAATGCCATCAACCCCGAT
CATCTCCAACCCAAATGCATTTTTGCTAAAGCCATCAACCCCGATCATGGCCTCAGTACG
AGTGAAGGGGCCGGCCATCCATCCTTCCTGGATTGTATCCCCTGAATCCAACCCAAATGC
ATTTCAGCTAAAGCCATCAACCTCATGTTTGCTCCCTTTTGTAACACATGGAAATCTCTG
CTTCCTTTTGTAAAACATGAAAATCTCAAGGCCTGAAGATTCATCTGAAAACAGGCGTGA
AGACTTGTCATTGTTAACTGTAAAACAAGATAAAAACCTTGACTACCTTGAATGTCATGA
GCTTGGAAAGTACAACAGCAGAACTGTACACATCTACTTGGTTATCATAGGCTGCTGATG
ATTTAGGACCGGCGCACACAAAATCAACAAAAGCAAAAGAGATCCAGCCTTCTTTCAATA
GTCATTACAAAATCATATAATATGCAAGTATGGGATATTTTACAAACAACTGAATTCAGG
TCGTTGTGAAAAAGTTGATTTTAATAATGATGTAAGTATTCACAGAACCAGGCAAAACTC
CATTTACAGGCAAGGGAACACAAACTGGAATTGTTTCAACTGATAATTAAATATCTCAGA
ACCAGCATATATCCCAAGTTTCAGCTACCATGGGTCCACCCCATCTTAAAACTAAACTAA
ATTGAAATCTGTACTTTAACGACAATATGATATACTCCCTAAATATAAGTCTTTCCAAAG
TTTTCACTATTATACTACACAAGGATGTACAGGCATAATATAGCAAAACAGAAAACACAG
TAAATAACTGTAAAGAAAATTGAAAATTGCGCCACTCTGTACTTTATAATGTGCAGGCAT
AATATAGCAAAACAGAAAACACAGTAAATAACTGTACAGAATATTGCCATTTATTATCTC
AGGACGCAATACATATATCACGCATAGGTTATGAAGGTAAGACATTACACTCTTTTTGCA
ATAAACTATAAAGGATTCCTCCAAATATGTACTCCATCAGATATAATAACAACCAAGACA
ATCGGCTTAATACTGAAGGCAAAATGATCTAATACATGTACTCTGTCTGGTGCTAAACAA
CAATTGTACATTGGTGGACTTCGCTGCAGCTCTTTGGAACATTTATCTCTTAGACAACTA
ATGCCACTTGACCTCCTCCACCAGCTTGAAGTACCTAAAGATGTACACTAGGCTCTAAAA
AAAGAGGTTACTGAAGCATGTCATGGAACATAAGTGAGTATACCAGCACAACTGATGTCT
GAATATACTCTTTGTGGTCAATTGACTATTATGTGCATAGTATGTGTTTCTACGATGCTC
CCCATGATTTCGACCTTGCAAGTGAGTATTGCAACCATAGGTTATGATATATACATACCT
TGTTATCAGGCAAACAAGTGGGCCAACACAGGTCATCAATGTCCCTGCTTTCATACATAG
ATCCAAACTGTTTTGAAGCAATAGCCTGGCTTTGTTTTTCCTCCAAGCAACTTGAGAGAC
AAAAATCCACAACTTTCAGCATTGTGCTTTCTCCTAGAAATATACTTGCATGTCTAGGTC
TAAATTAACAATACAACTCTTGCGAAGATAATAAAAACCTTACAAATTACTTGATCATTC
AATAGCACTTTATCATTATGGATTCATGCATAATCAAAGCATTCATCTTCCTTCACAAGT
TTTTGTTAAACTTTTCCATCTTTCTTTGTGAGAACACAACACCCAATTATTACTTTTTTG
CTTTTTTTAGTCATGGATATGCATGTGGGACAATAATAGCTCTACAAAATAATCAGCAAA
TTTGTGAAGGTTATCAATATATTCAGAGATCGATATTCACCACTTAGACCTAAAACCTGC
AAATATATTGCTAGACGAAAACATGGTGCCAAAAATGACGGATTTTGGTTTGTCAAGATG
CTTTGAAGAAAAGCAAAGTCAAGCCAGCTATCACTTCAATAGCATCCGGGTCTATGAAAG
CTGGTTTCAAACTTTAATCCATGAGCCCAGGCTGCAGCTCATTTTCTCGTGGTACTGTAA
GAAGAACAAATAACAAGTGTTAGTTATGATGCTACTATACCAACTCCAGTTACTCAGTAG
ATAAACAGCAAAACTACAGACACGTACGCTCAGATGAAAATATCTGTAAGCAAATTTGGT
AGGAACACTTATTACTGGGACAGCCAGACAAATATTGTCAACAACAGACGCAAACGGATT
GGGTATCACAGCCTATAAATCCCACGGTACTTTTGCTGTTCGATCTACTGATGGACTTGA
AAGCATGGGTAAAAACTACACTATAAACAGAGATCTACAACGATGGGATCGCAAACACGA
CTGATAAGCAGGCCGAGCAGCTTCTAAGTCAAGATCCAAGAAGCTACTGCCGACAATGAA
CTATGAAGCTAAAAAAGCTACGAGTAAAGAGCACAAGCAGTAGCACCAATCACAGTTCAT
CTGGAGAAATATTTGCAATGGAAAGAAGAATATTGTGATTACCTTGGGGGAGCCCTGCTG
CCGGCGGCTTCAGATCTCGTCTGGTGAGGATAGGGTTGAATGAGAGGAGATGCAGGGATT
ATATAGCACAATCACAGGTTATTTAATGGGCCACTAACCGGCTCGGTTGTTGTTGGGTTG
GGCCGATGGAAGAAAAATGAAAACCCTAATTCTGTTGGGCTAGCAGCCCATACGGACGTA
CATGTCGCAGCGTTTCCGTGGCAGCCCGAGACTAGCGGAGCTTTTCCCCATTCGACGCTT
CAGCCCATGTAGCTCCCAGGCGCCCACACGCCAACGCCGCGGCCGGCCCATGTAGATTTC
TCATTTTATTTCCGCTGGTTCGCTAGATAGCATCTATACTACTAATAAAAGATCAAACGA
AAATTTCTCTAGATACACACAACTATTATCCCCACAAAAACAAACACCAATCACCACCAC
ACAATTAGTCAACAAATTATAATCTAACGGCCTTCCACCATCCATTCAGNNCGACGGTGT
GCAGTTACCAAATTAACAAAGGTTCATCGTGCTCCACCTCCTCCTACAGCGAACAAGTGT
TGCGAATTCGGCCGCTCGGTCCGCCCCCGCCTCGCGCAACCGCCG