| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_116945
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_1904 |
1 |
552 bp |
AK369234 |
Not available |
Available |
None |
CDS Structure of MLOC_1904
Contig Sequence (4019 bp)
>contig_116945 4019 assembly3_WGSMorex_rbca.fasta
TGGGTCGTGCCCTTCCCTTCAAGCCGAAGATGGCCAGATTCTGCGCGCGCAGCTGCTGGG
AGGCATCAGCGAACTGTCCCTTGAGCTCCTTGAGTGTGTCAACGATCGATTTGAGGGTAG
CGCGGTCCTCTGCGCGCTCTGTCCATGCGGTGTGGTTCTCCTCGAAGAGGCTGTTCAGCA
TGGCTACCACGGCCTCATGATCCTCGTGTTGTTTGAGCGCGAGGTCTTCTAGGGTTTGCG
GCAAGGGCGCCGGCTGCGGAGGCAGTGGAGGCGGCGGAGACATCGCCGCCTGGATCGACG
AAGAATCTGATACCAAGTTGTCACGGACTGGTGGGTTGGAACGGAGGTTGTAGTCATGGA
AGACAGGAGGCCGAGGCCGAGTCCCTCGCCGGCCTATCGCTGGAGAAGGGGGTGAGGATA
GGCGCCGAGGCGCAGGAGCAAGGGGTGAGAGATTAGATTGTTTTCTGCTTGACTTTATTG
ATCCCCAAAGCTGGCTATATAAAGCCTGATTACAAGACTAGACTCCTACTCTAATTGGGA
GTTGGCAAGGTAACCTTCTACGAGACTAAACCTTTCCAACTAGCCCAGACTCCTAATCTA
ACACAACTTCTGTAATTACAATATGCCATAGCTTAGGCTGGTGCAGGCCCAGCCGGCGTG
GGTCATCGCCTATAGGGCTGTGACCCCACATGACACATGCTAGTACCCACATATATCCTT
GTTGTTAAATAGTACTCCCTCCATTCACAAATATAACATGTTTTGGATATTTCAATATGG
ACTACATACGGTCTAAAATGAGTGAACAAACACACTAAAACGTGCCTATATAAATCCAAT
TCAGAAAAAAGTTAGAACATCTTATATTTGTGAACGGAGGGGGTACTATGAATCCTGTTC
ATTCTTAATGTACTCTACACTCTAGTGGCATAACCCAACAAGTACATCCTTTTCCTTCCT
ATCAAGTACAAGTATGTCAACATCGACTGAAATGTTTCACAATTGTTGAATGCTTGGATG
CCAAAGAACTGAGGGTGGGATTTTACATACGTACTGTTCCTTATTGCAGACCCAAAAGGC
ATATAAATAAAGTTTAAGAATGAGAAAATAATTAGCTTACCTGGTAGATCTTTCCAGTAG
TTATATTATTGTCCCGGGTGAGTTTAATATCAAGAAACCTCTCATAATTCCCAAGATCCA
AGTCCACCTGCAAGATGCACAAGACAATACTTTTAATGAGGTGAGTGAATGAACATTCCC
TAGCCATTTTTTTCACATTTGGACTTGGTCCTATGTCAGTACCTCACCACCATCATCTAA
CACAAACACTTCACCGTGTTCAAACGGGGACATAGTCCCAGCATCAGTGTTGAGGTAAGG
ATCTGCATATTGAGATAAAGCAAATATAAAATGTCAAGCTCATGAGGCCAACTAGAGCAA
TCGAGCAAGTATTAGCTGGCATGTCGCCACCAGTTCTACAAGGCAAAAGGTACAATCAAG
CCCTAAGTACCGCAATGGTACAGGAAGTCACAAGGTTACAAGCTTACAACAGCAAAAACA
AAGCAGTGTTTAGGTGGTACTGGATAAGAATAACTAGGAGCAACCAAAACATGTAGCATG
GCAATGAATCAAGTCAAAGATTCCAACGCGCCAAGCTGGCATCTAATGGTTCGGCCACAT
CTACATCAGCATATATCTAAACAACATCGTGAGACCTGCACAGCACGAGGCATCTGAAAG
ACAAATACGAGCGGAGGGGAAACCCAGTCTTTTTCAGATATTTGGGAAATCGCACGGACA
CAAAAGGATGAAAGCATATCAGCTCAAATCTGAGAGCTTGTTCAGATATTTGGGAACTCG
CCCAAGTGACTTGCACAGATCATTATCCGAAAATATTGGCCACAGATTGCAATGGCATAG
GTGCTAGCCAGTGAAGGAAAAGTCAGAAGCTTTCTTTCATGGGCCGCCATTGTTCAGTTG
AGACCTCAAACCTTTATTCCTCGCCCCAAATCAGCACCGCGGAAAAGATCTTCGTAGCAC
CCTGAAATGGTCTGCTACTAAAGTAGAAACCCGGGCCTGAGTTTCCCTTTGCTGGTCTAA
AAGCTCTCTCCCACTAGGCCACTAGAAGCAATCGCTTCAATTGGGAAATTATAATAAAAT
CTGTCTCTCACGCGCGCAGAAGCCAAAGATCAGCAAGGTAATCAACATCATATACACCAC
GACCCCTAAAACCCTGGGCGGAATGTTGGAACGAGGGGCTTTCCACCAGACCCAGCCAAG
AATGCCGGGGCGGGGCCTTCCTGCACCTACTCCCACCCGCAGCCTTGAGCCGCGCGAATC
GCTCCAAAAGGGGAAATGAAATCGTAACGAAAACAAATCAAATCTTTCGCCGGATATCGG
ATCGAGGGCGGGCTCGAGAACCACAAAGCCAACCCCTTCCCGATAAACCCCAAACAGCGT
CTTTTCAGGAGCCCGAAAAGGCGGTTTCTGAACACTAGGAAGAGAAACATCACACGGCCG
GCGGCGGTCACGTACCGATCTTGATGGACGTAATGCGAAGACCGCACGCCTTGAGGACGA
CGCCGATGCTGCTGGCCGTGACACCCTTGCCGAGGCCGCTAACAACACCACCAGTGACCA
GCACGTACTTCATCTCGCCGGGAATCTCGGGTCAATCCGCCGCCGCCGCCGCCTCCCGAA
TCCTTCTGCACCCCAAGCCCGGCTGGCGCGCGTGCTCTTGGGCTGGGCCTGTTTGGTGTT
TATGAGCGCTCGCGTGCGGACAGTGGAGAAGGTTTTAGCAGGTGACTAGGGTAGCACGCA
GCCGTTTGGGAGGGGAGGAGGAAGGGCCGAGGGGAGGCAATGGAGGCGCAGGGGATAGAG
CCATGAGGAAGGAGGGCTTTGGGCTATTTATATTCTCTCGTCATTTTTTTATTTACCTTC
CTCCCCCTCTCCTCTATTTGTCCGGGTTATGTTTACTCGTGATCGCTTTGAGGAGAATAA
GAAATGTGAAATGGCGATTTCATGAATAGGAGTACATCTTATTTTTTACGGATGATTTCA
TACTCCCTCCGTCCCAAAATTCTTATCTTAGTTTTGTATAAAAATAAATATATATCTAAA
TACTAAAACATAACTAGATACATTTGTATCTACACAAATCCAAGACAATAATTTTGAAAC
AGAGGAAGTACATATTACTGTATTGTGTAGGCATTTTTCAATTTAAGTTTTAGATGAAGC
ATATCACATATTTTTCATGCATAGTATTGGGTAGGAAGGAGAGGGTTTCATGCATAATAT
TGTGTTCGAAATGTGTACGTGAGAGATTTCCATTCATATTGAATTCGTAAGGAGGATGAC
AACTGTCAAGTGTCTGCGTTCACTGCTCACCCTTCCAAAGCTATGATCATTTTTAGATCA
ACTTTTTCTATAACCTCTCTCCTGCTAAGCCAATGAACACCATGATGGGGATATGTATCC
AGGGTAGGGTCATAGGTCTGACCTATATGTCATATCCAATGACACTACATTGAAGACTTA
AAGATTACAAGGAAGGTTACAGCTGACTCGTCATTGTGCATGGGTCACTCGGTAGAACAT
CCACTTGGAGACTTTCTACCTTCACTCGACGGAAGCCTTTCACTCGGAAGAACTAGAAGT
CAGTCGACCGCAGAAGATTAGAAGCCACTCCAGGAAGGCCAACGAGCGGGCATTCGACTG
GTCGTGATAAGTAACATTTATTACGTACGTTATCAGTAACGTACGCCTTTATCTCCATTA
ATTGAACCCTTTATCTCCATTAATCGAACCCTTGGTTGCCCGGTCTTGATGAGGGGCAGC
ACACTCTATATAAGTCATCCCTCCCCTCTGGCACAAGGGTTCGCAGCGTGTGTAACACAC
ATATTCCACACGTCAAGAGCTCCTGAGCACTGAGACGTAGGGTTGTTACCTCCACGAGAG
GGCCCTGAACTCATACATCGTGTGTACAAACTCGCCGTAGCTAGGACTGTGCCCTCTCC
