Contig Data
morexGenes
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Map Locations of contig_116845 (2348 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_116845

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_1886 7 1365 bp MLOC_1886.3 Available Available LOC_Os03g63710.2, FRAME:+3, EVALUE:2e-67, 13103.m07066 protein GTPase-activating protein, putative, expressed





CDS Structure of MLOC_1886






Contig Sequence (2348 bp)

>contig_116845 2348 assembly3_WGSMorex_rbca.fasta
CCCCACTACTATAATTTTTTTTGCAAAACTACTAATGGCGCATCACTAGCTAGTGCGCCA
TTAGTAATCAGTGTTACTAATGGCGCATTTGTAGGTGGTGCACCATTAGTACTTTTACAA
AAAAAAGATCTCTCTGCCACCCACGACCCCTACCAGCCCCAAGCCAGATCTCCACCCATC
GCGGCGGAGCCATGGCGTTCGACGCCTTCAACGACAAGACCGCCGTCTTCCGCCGCCTCA
AGGCCAAACCTGGGAAAAAGGTGTGTATACCTCTTCTTCCTCCTACCCTCCCACCCCCCT
TCCTACCTACCGGTTAGCTCAGCCAGCCAGATCTGCGAGCCACCGCCTCAGTACAGATCT
GATCCATATGTGCTATGGCTATGGAAGATGTGCTTCGACTACAACGCCAAGAACACTACA
TGGGCATCCGTCACCTACGGCATCTTCCTCTGCCTCGACTGCTCCACCTTCCACCGCAGC
CTCGGAGTACACATCGCATTCGTCAGGTACAACTTGCTTCCCTCCAGATCTTACCGCTAC
TCGATCTCATCGATACATGCCCCGCACCATGATCAATTCAATTCCAATGCTCGATTCATT
CACCACCAAGCATCCATACTCCCTGCTTGGTCGACCTAAAACTAATCTCTTTGCTGCGTT
CGTGTGATCCAATCCCAATGGCCGACATCCAGCCACCTGACATAAGAATGGATTAAACCT
GGGACGAGCCTTTATGCCCTCGGCGGCAGAGAGCCAAACACACACCGATGCCCATATCGT
TTGCTAGGAAAAAAAACTAAGGCTAAGATGGAGTTGAGAGCGGGCTTGCTTCGTCTTGGT
ACAACAACCAACCTCTAATAGTCCACAAGTGGCACATTGGTCTCCTAACATATACATATC
ATGCATTCCTAAGCCGATCAACAGTGTGAGCTTTGTCTATTTTTCAAAGTTAAAGCAATG
TTAAGTTTGCCCTTTGTGCTATATGCTTCCTAGTCTTGGGTCACAGAAAAGAGTGCGAGG
GTCATCCTACGTTTTCTCTACATTCTTGAGAAGAAACTCCATGGATCCACTGCATGGTGA
TATGATCTGCTGCTAATGCATTACTCCTTGCAATCACCACCACCACCTGCTGACGCGTTA
CTCATTTTGTTGTCTATGTTTTGTCAATTTGTTGTGCCAAGAGTAAACCTTTTTCTCGTG
ATTACCAAGTTCCAGGATAACAACTTTCTGCTACTATTTGCCTTTTGTGCCTACCATCAG
TTTCATGTTGTTTCCCCTCTCTCTTACACAAAACTCAAACTGTACATTATATTTCGTATG
TAGGTTAACGAACCTGGACTCATGGACTCCAGATCAGCTAAAGATGATGTCTTTTGGAGG
CAACAATCGTGCAGATGCCTTCTTTAAACAGCATGGGTGGACAGAGGGCAGTGGGAAAGT
CGATTCAAAGTACACATCAAGGGCTGCTGAATTATAGAGGCAGATACTGCAAAAGGAAGT
TGCTAAACACATTCTTTTGCTCTGTTAGAGAGAAGATAATGATAGTCCCGAGGAAGAAAA
CTCAGCGCGATCTCCGAAGATTGGAGAAAGCTGAAAAGGCTACTCAACTAGATAAGGTTA
TTTTTCTTGATATACATTGCCATGTTCTAACATCTTCCTGCTATCGATCCGAGTGTTACC
TTCCCATGTTCTAACATCTTCCTGCTATTAATCAGAGTATTGAAAGTGAACTAACATCTT
CCTGTTGCAGACCTGTAGTTCTTTACGATCTCCTTGATTCACTTTAGGAATTTCATTCAT
CTTTGCATGAGTCCTTCTCATCAATTGACAAAAGTTCTACAGTTTCTGGAAACACAAAGA
ACTGTATTGTTGATCTTTCATCTTGACCAGCATAATTTTCTTGAGTGTTGAACTTATGAT
TACTTGTTGAGTTGATGTTTTGACTTCACTATTTAACCAAAAATTTGTTTTGTCAGGTTG
CAATATTTGTTGTGCTTGTCTTGACTTTAAGAAGGAAGCCAGATGTACTAATAAACCTCT
CCCCAAAAATAGTGGGGAACAGTAAATATCTTGGACAGGAAAAGCGTCCCATCATCGCCT
GGGTTATTAATCAGGTATTATTCACATTTCTTATCACTATCTTGCTTGCTCTGAATTATT
TTTACTTTTGAGGCCTAAAAGCTAAGGTGAGCTTATGTGCACAAGTTGTTATGCCGTCTC
TTTAAGTTTTTTTTATTACTGTTCAGACTCTTCCATCTATTCTTGTTGTACTTTGTGTGT
GAATCTGTTCTACTAGAAAGTAGTTCATGTTGTAGTGAGGCAAAATGAAACATATGTGGC
ATTGACAC