morexGenes - Barley RNA-seq Database

Contig contig_115551

Source Contig contig_115551

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_115551 (2903 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location

Predicted Genes from contig_115551

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_1737	1	658 bp	MLOC_1737.1	Available	Available	None

CDS Structure of MLOC_1737

Contig Sequence (2903 bp)

>contig_115551 2903 assembly3_WGSMorex_rbca.fasta
GGGTTGAGTTTGTTGGGGGGGGTGCTGAGGTTTGTCTTAAAACCCATGCTCCTTCTTTTT
GTTTCCACCCCCCCCCCCCCCCAAAAAAAATCTTGATCTCGTGTGTGCTGCCAATGGTGA
TTCGATACAAGTACGACAGGGGTCGCTGGAGGTGCGCACGGGCAACAGCAGACCAGATCC
GGCAACTATTGTTGGAGAGGGACCGTATCCAAGGCAGAGCAAGATGACGGTGCGAGGATC
CTCTTTGCGGCCAAGGCAGAGAGCTCCTGTTTAGGCATGTCGATGACCTACGGAGGCATG
AGCATAGGAGGTAAGTAAAGTCGGAGGAAGAGGGAGAGGGAAAAGAGAAACAAGGGAGAG
AGGAAGGAGATGGAGGGCGCACCGGGTCTGGTCGCCGGTGGTGAGGTGCTCCGTCGTCGC
GGCATGGAGGCGAGGGGGGAGACGGGCGAGGTCCTGGACGCCAGCGGTGCGAGGTGGCGG
CCTCATTTGGCGCCATGAAGGAGGAGGTGGGAGAGCCTATGGAGAGAGGGGGGAGAGTGA
GGGAGAGAGGAGGGATTCCACCGAGGATATGGGGACTTCACCTACCTTGTACTTAGTAGT
AGTGAGGGGGTATAAACCTACGCAACTACTATCAACTTAGTAGTAGCGCGTGTTTAGACC
CCTCGCTACTACTATGGCATGTCCCGGAGGAACACGGTAGAGACCACTTATAGTAGCGAG
CGGTATAAACCCATGCTACTGCTATCAACTTAGTGGTAGCGAGGGGTATAAACTCGCGCT
ACTAGTAAGTAGCAGTAGCGAGGGGGTTTAAACCTGCGCTACTAGTAAGCGTCAACCTAT
AAGATTTTCCCTAGTAGTGGGTTGCGCCGCTGCTCTAGCGTCAGCTGCTGCCGCCGGCGC
CTCACCTCCTTCGCATGCGCCCACGCCGACCGCAGTACCGCTTGCACTGGGATCCTCCCC
ATATCCAATTGTTAGTCGTGTGGCAGTGTGACGTCGGGGTAAGGGAAGGGGACACGGTGC
TTCGAGTGCCACCTGGCCTGGTGCACTGTATGCTAACCCGCAGTCGAGGCGGACGGGAAG
ACGCCGGCCACGGGAATGCATGGACAAGGAGAGCGGGGGACTTGCCCTTGCCTTTTCCGG
AGAAGAAACCCATGATGGTGGCTAGGGTTTGCCGCTGGCGGGGGAGCAGCGGGTGGCTAG
ATGGGGACGACTTCTGGAAGGATGGGGAAGAGGATGACCCCCCCCCACACACACACACCC
TGCTCGGATTAAAAAAGACGCATGGGGATCGATGACACATGGGCCTATGATGGTCGGTCA
TCGTTAATAAAAACGACAATGGTTTTGACCGGGCGCCATATGTGGACGGGCGCGGACATG
AGAAGGTGTGCGTCGCGTTCTTGTCGATGCATTTCAACCTCAAATTTGAGCCTGAAATGG
GTCGGTGCGGATAGGGAGCGAACGTATTTTGAGAATGGGTCGACGCGCTGGACCTCCACT
TTTGTCCGCGGCGATCCAGACGGACTATGACGAACGAAATGAGTCGTCGAGTTAAGGTTG
CTCTAAAGGCTTAAACGAAAGGATGTTAGAGTAGTAGATTTTTGTACGACAAAATACTCC
ATTTAACATCCTTTCTAACAGCGCAAATCATCCCTTTTTTTTTCAAGTATCTCTCAATTG
TTCACTTAAGAGTTTGAAAAAAAGGAAATTCTTCACACTGACTTAGTATTGCCTGCTCCC
TTTCCGGTTTTCTAAATGCCAAACTGCCAACTGTCTCTTCAAAGTTTGCATCAAATATAG
TGTGTCCGTGCTTTTTCTTTTCCTTCTGAGCAACCTGGACTTGACAGTTCTAAAGGGCCT
TTCAAGACAGAAATGAAATGCTCCAAAAGTTCGCGTCCACTGTCCAAATAAATCCTGTCC
TGAATATCATCAGTTATATGTACTTTGTTAGTGTGCTCGACTATGCGGCAAAAAAATATG
AGACAATTTCGGACAATATGTCTTCAGAATTTTATTATGCTTGCAGTTGCTCAAAAATTA
AAAGAGGCTATGCCCAGGTTCAGAAGTTCAAACAAGTACACGCGACAAAAAAAGATATAC
TTCTAACAAATAGCACTAACTGACGACGTGTTGTTCAACCTTCAGAGTTGCAAATTTCAC
TGTGAACACAACTGAAATATATAGTTCCAACCTCCACACAAAAAAACACAGTTTTTCACA
AATTTCACAGTATAGTAGCTCACAAAGGTTAACCAATTGTTGGTTGGTTACATGATTTAT
GCGCACTTACATCCAGCTTGCAGACTGATGCTGTTTCCTCAACTCCCAAAGAACAGCATT
CTTAAAGTACTGCTGTTGCTCAGCCTTCACAGTTGTAATAAATTAATCTGTTAACAAAAC
TCACATATAGCTTCAGGCTTCATGCACCAAACACACTTTCTTTTAAAGAAATAACAGTGT
AGTTGCTTTCACAAATTTCAATCTATTTAACTGGAAGCAGCAGCTTGCCAGGCATTATAT
AGCAGAATATGCAAGTGAACATCGAGAGAACTGCAGTCAACAGTCAGCCACAAGTTACAA
TCAAGACGGATTCGCGGTCATGGGAATAGAATTCTGAGATACATGGGGCAAAGTGAGCTC
CGACCACACTACAAATGCAACCATGGTGGTACCCTAAAAATGCATGAGACAATCTAGAGC
AACAACATTTTGAAAGTTTCATGGAGATCATATTCAGTCAACTACCTTGGTTTGCAGAGT
CGGTACATGGGGTATTCGCAGATTCTGCATTGTCACGAGAGGCAATTAATTCGTGTAGCA
TGCGGAACCTCTTGTGATCGGCTGCCAGTTCTACCACAGGCTCGTTGGGACGTTCACGCT
TTGGTACAAACCTAGGACTTGTC