Contig Data
morexGenes
Links



Map Locations of contig_115070 (6014 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_115070

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_1691 1 219 bp MLOC_1691.1 Available Available None
MLOC_1690 1 1336 bp MLOC_1690.1 Available Available LOC_Os10g38740.1, FRAME:+2, EVALUE:4e-109, 13110.m03529 protein glutathione S-transferase, putative, expressed





CDS Structure of MLOC_1691






CDS Structure of MLOC_1690






Contig Sequence (6014 bp)

>contig_115070 6014 assembly3_WGSMorex_rbca.fasta
TTACGACGATGACGGCGAATCCCCCTCTCCGGAGCCCAGAANNNNNNNNNGATCTGGCCT
CCCGATGAAGAACATGAGGTGGCGGCGACTCCGTATTGTAAAACGCAATGAAATTTCCTA
TCCTATTTTTCTCGAGAAATATGAATTTATAGTATCCATATTAGGGTTAGGGGTGGCGCG
CCTTGGTGCCTAGTGGTCGCCCCCTCCCTCTAGTTGGTCTTGGTTCTAGTATTTTTCTTT
TATTCCAAAATAATTCTCCAAAAAGTTTCGTTCAATTTCGAGAACTTTTATTTCTGCACA
AAAACAACACTATGGCCGTTCTGCTGAAAATGGCATCACTCCAGGTTAGTCTCATTCAAA
TCATGCANATTAGAGTTCAAAACAAGAGCAAAAACATTAGAAAAATAGGTACAATGGATC
TGTATCAACCACCATATTCTATTCACCTATTTGCCATGTTCATGGTTCACACTCATGTAT
TGAGCGAGGAATAAAAAGTTGAAGCGTGTTAAAAAGTACGATCCAATTGCGTGGCTTAAC
ACCGTGGTGCTTTGCATTTGTATTTATGTGGTGAATACAGAGCCATGCCATGCTAATATG
AGAAAATGAATAGGTGGTAAATATTATTAAAGGATCCTATATTTTGAAAATTGATGATTA
TGTTACTTATGTTCATGTGTATTACTATGTTGATGTTTGTTAATNNNNCATTTCTCAATG
ATCATACATGCAAAACATTACAGGTTGGATAGCATGTCACATCAAAAATNNNNNNNNATC
ATTTACCTACTCGAGGACAAGAAGGAATTAAGTTTGGGGATGCTGATGCATCTCCAACGT
ATCTATAATTTTCTATCGTTCCATGCTATTATATTATCATTCTAGGACGTGTTTTAGGCA
TTTACTTGTTCTTTTCTATTATTTTTTAGCACTAACCTATTAATCTAGTACCAACTACGA
GTTGATGTTTTCTGCATGTTTTTGGCTTTTTAAGAATACTACTACAAGTAAAGTCCAAAT
ATTTTGAAACTTTTTGACGATTGTTTCTGGACAAAATAAGGACTTGTATGCTTCGGAAGG
AGACTGGAGGGCCCACGGGGTGGCACCAAGCTAATAGGGCACCCAGGGAGGTGGCCGCGC
CATGATGGCTTGGGACCACCTCCCTTGGCCTTCAACGTTTCTGTGTGTCCTATAAATTCT
CATTAATCCCCAAAACCCTAAGGAGCCTCCTAAAACACTTTTTTCGCCGCCACAATTCTC
TGCTCTGCCGTGTGACCATCTGGAGACCTGATCCAATGCCCTATAATAGGGGGTCGATCA
CGGAAGGGCTCTACATCAACCTTACTGATCCCATGGTGATGTGTGAGTAGTTCACTACAG
ACCTACGGTCCGTAGTTAGTACCTACATGGCAATCTCTCTCCATGTTCTTCATTGCCATG
ATCACTGCGATTCTTGCGGTGATCTATCATATGTAATCACTTTGCGCGGTGTGTTTGTTG
GGATCCGATGAATTATGAGTTTATGTTCAGATTAGTCATGAAATATATTGAGTCTTCTCT
GAATTCTTATATGCATGATTATGATATCTTTGTAATTCTCTCCGGTCTATTAATTTGGTT
TGGCCAACTAGATTCATCTATTTTCAGTGAGAGAGGTGTGTTGTAGTGGGTTCAATTTTG
CGGTGCTCTATATCCGAGTGATAAAATAGGGGACAAGACACGTATTTGTATTGCTACCAC
TAAGGATAAAACGATGGGTTTGATTCATGTTAATTGGATTTTATTTGTCTACATCATGTC
ATCGTTCTCCAAACATTACTTTATTTTACTTAATACTCNNNNTGCATGTTGGATAGCGGT
CGATGGATAGAGTAATAGTAGTAGATGCAGGCAGAAGTCGGTCTACTTGCTTATAGACGT
GATGCTTCTATATAATGATCATTATCATGAATAAAATATTATATAACTATGTCTTTTCTA
TCAATTATCCAATAGTAATTTGTTTACCACCGCATGCCCTCTATGAGAGAGAAGCATCTA
GCGAAAACCATGGCCCCCGGATATATTCCCAAATATATTTACAAAAACTCTAAATACCTC
GTTGCCTTTTATTATTTGTATTTACTTTTTATATTTATTATATTCCAATTATCTATTTAT
CACTACATACTGCTTGTAATTAACGAGTTTAGGGGGATTGACAATCCTCTTGCCCGTGTT
GGATGCAAATATGTGCTCTTTTGTGTGTAGGCGTTGAAGACAGAGAAGTTGTGTGGTTCT
CCTATTGGTTCGATAACCTTGATTCTCACTAAGGGGTATACTTGTCTATATTGTGTTGCA
TTATCCCCTCTTCAAAAAAAACCCATGCAAATCACAAGTATAACCAATCTTTTCTCCTGA
TACAGGACACCGTAAAAACCGACGCGAAAACTGGACTTTTGCAAATCGAGGGGAGCCTTT
TACCGCACCCCTTAAAAAGTTTAAAGGTCGAAGGTATATAAGGTGCCTGTTCTGACTACT
TTTTCCGTTAAAAATTAAAAATTAACAGTTATTTTACAGTTTGATAGAATATAAGGGGTC
TGCTAGAGATACTCTAAGCGGCAACACAGATGTAATGCCCTGTTAATATAAGTGGCGTGT
ATGTATTTGAGTTTTGAGTCATGGTTATTGGGTTAAGAGTGTGTGTAAACTCTTTTGATA
GTGTATGTATAAGCATCGAATTATAGTATTTCTCAAGTTTAAGGATATACTCTCTTGGTT
CCTAAATATAAGTCTTTTTAGAAATTCTACTATTGAACTATATACGGATGTATGTAGACA
TATTTTGAGGCGTATGTTCATTCATTTTGCTCCGTATCTAATTAAAATATCTATAAAGAC
TTATATTTAAGAACGGATGGAGTATATTTTTTGAACTGATTTTAAGGGTATTTTTGTTAT
GCGCCAACGAGTTCACCCGACGACCGATGTAATTTTCTTCTAATAAAGGTCCGTGCTGCT
CTGCGAAAGCTTCCATTCCACCGCGACCTTTCTTTGCAAAACGTTGAACGAGTAATTCGA
TGTTATGCCAGTGAAAAGGCCGGCGAAAGAGATGCCGGAATAGATAGGCAAAGCTTTACA
AAGTATAGCTTCCACCTCTTTGTTTTTTCAATGGTGGCTGCTACTTTTCTGAAGACAAAA
TAACAGTTTGATTTTGCCATCATTACGTCCGTGCTGCCGACATCAAACTTGAAGCATTTC
TGTAGTAGCAATGTCCAACGTGCCCATCAAAGGCGTTGACGTATACCAGTCAAGCAGCCA
GTTTATCTACCAATTCCTAATCTCTCTTGCTGTATATATAAACCCACGTGGGCTTGCTCG
TATAATCAGATCACAACCCGAGCATTCTGCAACCACTTCCATCAACGCCACACACGTCTC
CTACCTACGCTTCGCACATCATCAGGGCTTGCCAATGGCAGGAGGCGGCGAGGGCGAGCT
GAAGCTGCTGGGCGTGTGGACGAGCCCGTTCGTCATCCGGGTGCGCGTGGTGCTCAACCT
CAAGTCGCTGCCGTACGAGTACGTGGAGGAGAACCTGGGCAGCAAGAGCGCGCTCCTCCT
GGGCTCCAACCCGGTGCACCAGAGCGTGCCGGTCCTCCTCCACGGCGGCCGCCCCGTGAA
CGAGTCCCAGGTCATCGTGCAGTACATCGACGAGGTCTGGGCGGGGGTCGGCCCGTCGGT
GCTCCCGGCCGACCCCTACGAGCGCGCCGTGGCGCGCTTCTGGGCGGCGTACGTCGACGA
CAAGGTCGGGTCGGCGTGGACGGGGATGCTCTTCTCGTGCAAGACGGAGGAGGAGAGGGC
GGAGGCCGTGTCCCGCGCCGTGGCGGCGCTGGAGACCCTGGAGGGCGCGCTCGCGGAGTG
CTCCGGGGGGAAGCCGTTCTTCGGCGGCGACGCCATCGGGTTCGTCGACGTCGTGCTCGG
CGGCTACCTCGGGTGGTTCGGGGCGATCGACAAGATCATCGGGCGCCGGCTGATCGACCC
GGCGAGGACGCCGCTGCTGGCCAGGTGGGAGGAGCGGTTCCGCGCGGCGGACGCGGCCAA
GGGCGTCGTGCCGGACGACGCCGACAAGATGCTCGACTTCTTGCCCACCCTGCTCGCTTG
GATCGCCTCCAAGGCCAAGTGAACCGTGCGGCCGTGACATCGTCTGCTCCTGGCATGTGT
GTTCGTCTGTGTGTGTCTGAGTCCTTTCATTGTGTGTTGAATAAATGTACCACATGCAGT
GTGTCCTACCATGGGCAAACGATGCTGAATAATTTTGCTGTTTGTGTGCTCAGTTAAGTG
TGGTGCCTGCTTTCTTGATTCCCGCGCAAAAGAAGGTAGTATGCGGTGACGACTGCACGC
ATGCAGAAAGAATCCAATCCACGCTGAGCATGCCCTTGACAAAATGTGTGACGAACGTGC
TGACCAGGTTAGTTGGACTGAAAAGGCTGTCGCGGTGCAGTGCTGAGACACCGAAATTCG
TACGCTTTCGGGGCAGATGACTTTTCTCCCGGCTGCTAGGCACCTCCACCGAACTAGCCC
AGCAATTGAATGACGAAAAACGTGACGGTTCGTCGGTGAAGCAAAGAGCTCTTGCCGATC
TCTCAGCAACGGTATGTAGGCACAGTATGGCCCACCTGATGGCATAGCCGCGAACGAATA
CAAAGTGACGGTGTTGCCGTGCTCGGATCGTTTTTCATGTATGATGATACATAAACCTGA
ATCAACGTGAAGGCAAAAAAGCTGGAATAGCTCAGTTGGCTAGAGCGTATGGCTGTTAAC
CATAAGGTCGGAGGTTCGAGCCCTCCTTCTAGCGACTTTTCTTATTTTTGGAAACTGCTT
TTGTTTCAATTCCTAGCGAACCGTCCACGAAAGTACAAATCTTTTATTTTTTGGAAACTG
CTTTTGTTTCAATTCCTAGCGAACCGTCCACGAAAGTACAAATCTTTTATTTTTAAATAG
CTATTTGCAAAACTGGTTTTGTTTCAATTCCCCTACTTAGCGAACCGTCGACGAAAGTAC
GAACTTTTATTTTTAAATAGCTATTATTCACTAGCTATTTTTTCTACATATGCAACTGTA
TCACAAAAGCAAGTCATGCATGTTGCATGTTACTCGCAAGTTGTTTTTTACATTATATAT
TTAATTAAAAAATATGTATTTTTCACTTGCATCATACCTACGTAATTTACATTTACATTG
ACATTCTTTTAACAATACTTCATTTTTATACCCTTTTTATTTTCTTCATCCTTAAATTTG
CATTTTTTCCATTAGTTATAGATATTTTTAGCAACTTTTATGCATTTTTAGCAAGTTTTC
CGCAACAACGTATCGGGACATCATCTAGTAAAAGCAACATTATCGAGATTTCTTTCGTCG
ATGTCCACATGGGTCCTGAGCTTAACCCAACAGTGTCGATGAGCAAGGAACGAAGAAACA
TGATCAAGCCGGTGACTAGGGGCGCCTCTACATCTCCCTTCTCGCAAGAGATAAAGTCGG
ACTGAACAAATTTGCCTCCTTATATGTTTATGGATGCGTTCAGACATGTTTACGGATGTT
TCTACACGAATTATCATATGTCACTCCCTGCATCCACATATCTTATATCCGAACTCTCAA
ATTCATGCAAAATCATGTACGTCGATCACACAAACTAATGTCACACGTAAATAACAAATG
TCCATACCGAACATAAATAGGATTTACATCAAATTTATTTAAAAGTGCACAATTAATCAT
CTACTTTTTGATTTCCATTATGGATACACATATGCTTCATCGGATCATTCAGTAGTTGCA
CGTGGGAGTGAAGATCTTGAAGGTCCTGATGCATCTGCAGAAAGTTGAACGGAGATGATT
CCCTATTGAAAACCTCCTAAACACCGGAGATTGTTGAAGTGCGTTAATGTCGTTATAAGA
AACCGCATTTTAAAGAAAGCATGCCAAATTCGTAAATCATGTGATGTCACCCCTGTTGGG
AAACGTCGCATGGG