Contig Data
morexGenes
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Map Locations of contig_114602 (8101 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_114602

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_1649 3 4399 bp MLOC_1649.1 Available Available None
MLOC_1650 2 4056 bp MLOC_1650.2 Available Available None





CDS Structure of MLOC_1649






CDS Structure of MLOC_1650






Contig Sequence (8101 bp)

>contig_114602 8101 assembly3_WGSMorex_rbca.fasta
CCCTCTGTGATCGATGCCCCCTCCGGCAGGGTGCTGGAACAGAGCTCCAGATGGCCTCCC
GTCGGAACAGATACTTGCGGCAACGTAAAAAGTGTTTCATGACTCCTTCTGGTGTGTTTT
TAGGGTAGATGAGAATTTATATGCCAAAGAACGGAGTCGGGAGGGCCACGAGGGAGGCAC
AAGCCAAGAGCCCCCCAGGTCGCGCCATGTTGGCTTGTGTGCCCCTCGTTAGGCCTCCAG
CCTTCTTCCGATGCTCGTTGGTCTTCTTTTGGTCCGAAAAAAATCACCAAAAAGTTTCAG
GGCAATTGGACTTCGATTGGTATGGAAAACCTGAAAAGTGAAAAACACACAGAAAATAGC
AACTCGCACTAGGCACTTGGTCAATAGGTTAGTGCTCAAATAATATTAGTTGGTAAATAA
ATACCCCAAAAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATTATAGC
TACGTTGGAGACTTATCATCCATATTTTGTTTTCATACATGGANNNNNNNNNNGATTTCA
TGGCCTCTAGCCATTTGCTCGAATCGGGACCCATCGTAGCTTCTCCATAGCTCGTAGGTT
CANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTACCACTCAGGAGTAGTAC
GTGTCATTATCGACCCACGAGGTTTGGTAGTAACTNNNNNNNNNNNNNCATGATCATCAT
CATTAGTTTCCTCTTCAATTGGCGTAGGCGTCACAGAAACACCTTCATGTGTCGTGCTAC
TCTCTAATTGAAGTAATGGTTCAATAACCTCATCAAGTTCCACCTTCTCCCACTCAATTC
TTTCGGAAAAAACTCTTTCTCTAGAAATGATCCACTCCACGCAACAAAGACTGTGCCTTC
GGATCTGAGATAGAAGGTATACCCAATTGTTTCCTTCACGTATGCTATGAAGACGCAATT
CTCCGCTTTGAGTTTGAGCTTATCCGGCTAAAGCCTTCTGACATAAGCATCGCAGGTGCA
ACTTTTAAGCAACAACAACTTAGGTCTCTTGCCAAACCATATTTCATGCGGTGTTGTCTC
AACGAAGTTTTATGGTGCCCTATTTAAAGTGAATACAGTTGTCTCTAATGCATAACCACA
AAAAGATAGTGGCAAATCGGTAAGAGACATCATAGTATGAACCATATCTAATAGAGCATG
CTACAACGTACGAACACACCATTACACTATGGTGTTTCACGTGGCATGAGTTGTGAAACA
ATTTACACATTGTATTAAATGCATACTAAACTCGTAACTCACATATTCACCTCCATGATC
ATATCGTAAACATTTTCTCTTCTTGTCACGATGATCTTCAACTTCACTTTCAAATTGCTT
GAACTTTACAACATTTCAGACTTCTGTTTCATCAAGTAAATATACTCGTATCTACTCAAA
TCATCTGTGAAGGTAAAAAAATAACAATATCCCCTGCGTGCTTCAGCATTCATTGGACTG
CATACATCAAAATGTATTATTTCTAATAAGTCACTTCCCCACTCCATCTTACCGGAAAAC
GAGATCTTAGTCATCTTGCCCATGAGTCATGGTTCACATGTCTCAAGCGATTCAAAATCG
AGCGAGTCCAAAGATCCACCAGCATAGAGTTTCTTCATGCGTTTTACAACAATATGACCT
AAGTCGTACTGCCAAAAGTAGCACTATCATTACTAACTACATCTTTTGGCATCAATATTG
TAAACATGTGTATCACTACGATCGAGATTCAATAAACCATTCACATTGCATGCATGATCA
TAAAAGATATTATTCGTGTAAATAGAATAACCCATTTTTCTCTAACTTACATGAACAATC
ATCTCGCAATAAACAAAACCAATATAATGTTGATGCTCCACGCAGACACCAAATAACATT
TATTTNNGTTTACCACTAATCCCGAAGGTAGACGGAGTGTGTGACGGTGATCACACCAAC
CTTGAAAACACTTCCAACACACATCATCACCTTGCCCTTATCTAGTATTCGTTTATCTCA
CAACTACTATTTCGAGTTACTAATATTAGCAACTGAGCCAGTATCAAATAACCAGGGTCT
ACAATGAACACTAGCAAGGCACACGTCAATAACATGTATATCAAATATAGTCTTGTTGAC
ATTGCCAGCCTTCTTATCTACCAAGTATCTAGGCAAGTTCCGCTTTCAGTAAGTGTTCCC
CTCACAACAGAAGCACTCGGTCTCTGGTTTGGGTCCAACCTTGGGTTTCTGCATTGGAAC
AACAACTTTCTTGCCATTCTTGAAGTTTTCCTTCTTGCTCTTGCCTTTCTTGAAACTAGT
AACCATGTACATGCAACGCACGTATTTAGTCAAAAATAAAATCTAGAGTATACATTATGT
ACACCGTATTACTTATTACAATTCATCCACTTGTTGAAGACTGGACGTATATGTGAACCC
TCTTAATAATACTACAATACTGAGTGCAAGCTAGATTATGTAGGAGACTACAAGACCTCT
TGCAGATTTATNTGTAAAGCTAGTTAGGTAAGGACAAAGAATCTATATATCGATTATTAC
ATCCACTAATTAGGCACGTGCCTTGGTGCTATAATATTTTCATGATTCATATCATGCAAA
AAATGAAGTGTTACTATAAGAGGCCGATAAATTAAGTCACTACATGACCAAGGTTGCAAC
CTCACATGCACGATCATCACTGATTGTGCCATTACCACTTCAAAAATTTGCAAGACAATT
CATGAATAAAGAATAAATTGATAATAAAATATCCATAAAATAGTGTAGATGAATCCTGAA
GTACAACAAGTGAATGCATAGAAAGGTGTATATACAGACTTACAAAAAACGCTTACATAA
CTTTACTCGTATAGAGCTCGCTACATTTCTCTCGGTACTTTGCCTCCAAAAGTTGTTTAA
TATGTGATGTAATCTACATTACAGTAGATATTTTTCTGTGTCAAGCTTCAAAATCATATT
CTATATATAAGAAACCGGGACAACTGCAATAGTGGGAAGGAACCAGTTTATGAGATTATA
AGCATGTTGTGGCATTTGACTTTACTCCTCTGAACATTGTACTACTAACATAGTAAAAAA
AATCAACAGGAAGGTACTCTCAAGAAAGCATTAGTCAAAAGCCAAAAAATATCACCAATC
TTACCTCACATTTACGGATAGCAGTACATTAGTCTATCTCAGAGCTCACATACAAATATA
GTAACGAAACTTTGCCTTGAATTCGGTAACAAGATTCTAATCTCTAACATTTACCTTGAA
AAAAAGGAACCTGGTCACATGATGCAAAAATACTTATAGACACAAATCATCAGTAGAGAA
TATTGAATCGTTAAATAGTCAGAATCTGCCAAGGTTAAGAAAATCGAATCATAATATAGT
CCACTGCAATGAATTCTCAAAATATCTTAAATTACTCTACTTCGTGTTATTAGCATGCTT
GTTCACCTTCCCATAGAGTGTCCGCTGATTCAGCTAGCTAGTGATTGTTTTTAGTCCATA
ATAGCAAATTTGTTGTACATGCTTCACACATGTAAAAAACAATGCAAAATGTTGTTTATT
TGTTTGTGAATCATGTGCACAGCCCATGGCAACATAGCTGAAGATATACTAAATACTTTC
TAGTTAACTCTTCAAATGACTAATCAATACGGAAGTCCTCACTACATCTCTAGGTAAGAA
CCAAATATCTCGGTCTATTTTTCTCTTCCAGTTTAGATCTCACAAAAGTAGTTGAGTACA
AAAAATATAGCAGACGGGATAACCTGAAGTAGCTATTATCAACCATGCATCATATATATC
AGCTGCCCATTAATGGTTAGTTCATACAATGTGCACAATTTCTGTTGAAGTAATAAAAGT
GATGGAAGACCTCAAGTACGCTCAACCCAGATTACTTACACAAGCAAAATATAGGAGAAA
GAGTGATGTTTATCAACTACAATTATTTTAATATAATCATGAAAAATAGGAAGCTCTTAA
GATAATCATGAAACATAGGAGGCTCCAGTTCACAGGAAACTAAATTGGCTCTTATAGGCC
GATCGATCATCACAACCAAAACAGGTGTTCAATTAACAACAAAATTGATGGCCTTGTATA
TACAAAAACAGAAGGAGCATGATAAATGGGATAGTGCCCTTGTATACACACAACGGGAAC
ACTGGAGCCTTAATTTAATTCCTACAGCTCAAAAGAGATAACATTGCTAGGTTGTAACAT
AGATCACGTGCAAGGAGAATGCATGGGCACCATATATAGTGTTTCATGAGTGTCGAGTAA
TAGCATTTCTCTTAACTATCCTTTATTGGTGTATGGACATAAGGCTTGTCTTGATCTTCA
GTTTTAGCATTCTAGTATGCAGTGCATGTCTATAACCATGTCTTATCAACGGAGAAAGAG
AGAGGCGACACCCGAATTCCTTGCTATCAGCACGCCATTCCAAGCATGCTCAGCCACCAT
GTTGTGCAACAAACCGTGATAATGATAATGGGTGGTGCAAAATAAGAAGCGAACAATAGG
ACAAAACCAATACTGACTCATGTTGAACAAAATCAAAATCTCACCTATAGATGCATCACG
AACCTGAGCCTCTGAATCTTTTGTTTGTGCTCTAAGGGAAAAATAGCATAATGCCAATGA
GGTTACCATTTGAACCAACTCTTATCATGGAAGCACACGGAGATAAGAGAAGTTGCATAT
TTTTTTGCTGATAGTGACAAACCTTAAGTTGCAGAGGAGGCGGGGCCGTCCTGCGCAGTG
GGAGGTCCGGTGAGTGAGGTCTGGCGAGATAAAGCATTACACCTGGTCGATGGGGCGGCG
GCGAATCTGGCCGAAGTGCGTGGTGCGTCGGGCGGCGCAGTGGGCGACACCACGTGCGTG
CCCGGAGGAAGGGACGACCACTCCTCGTGCATCCGCGACGGTGGCTCACCTGCATGGGAG
CGATCGAAGCCTCGCGCGCGTGTCCAAGCCAAGGCTTGTGTTTGGCTCCTCTCCGCGCGT
CTGTCGTCGGGAGTTGGGGGCCGAGTCGACGTAATGGAGAGGGAGGCCGACGGTGACCAA
GGTGAGGTGTGAGTAGCGGGTGAGATGGGGAACGCGGTTAGCGGCGGCGGCTCTCCATAG
GAACAGGAGGTGGGGGTTGACCCGATCGAGCGTGATGCACCATGGGTTATGGGTGGACCA
GGGGCATGGGAGTGGGGCTCAGCGTTTCGGACGTGGATGCGGGGCTGGGCGTTTCGTTAG
CGATGTACTTTCGTTAACGAAGATGTTTAGACCATTGATGATATCGTTAGCAGCTAAGAT
TGTGATTTGGATCTGCTTCTTCCTCCTTTTATAGTATAGACTCCAGTAGTAGAGTAGTAG
ATGAAGTATCATTTCACATATTACTGCTTGGAGTTTCATCACTTAGTGGTCTGCTCTGCA
TTCCCCACTTATTGACACTGCAGAATCATGTGTGCTCTACTATCGTATTTGTTTCCTTGA
GTACAAAATCAGCGTTGATTTGGATTATGGCAACATGTCTTTGTGTCTGATCTAACGGAC
TGCATCTGTCGGTGAATCCACTCACTACTTACAGGTCATTAATTGTGTGCCAAAATGTCC
TATTTTCAAAATTTGTTGAACCACCAGTTGTGTGCCGAAATGTCCCTCTACACATAACAC
TACTACCTTGTAATATTTGTAGAGGGGCATCAATAAATAAAAATAAGATGAAATAAATAA
ACAAATGAAGTTTTGGTTTAGGCGTCAATCCCATTTTCCAAATGCTCACTGATAGTATTT
CCCTTTTTCTTTTCTCATACGGTATCCATCTAATATTTCTTGCAACATTAGACAAAACTT
GGGGAGGAGAACTCGGTACACTAAGCAATTTTGGTCACAGGAGGGTTCCAGTTTGAAAGC
TACTGACTGCATTTCAGGAAGACCATTTAATGACAACCAACATCTACATATGCATCTACG
GAATATCAAAAAATGTAACATACTCATTTATTCTCACTGGAGATCTAAATGGTCAAGATG
ATGTTCTACATTGGAATGTCTTCTATGGAGATCTTAATGCTCAACATGATGTTATGAAAT
GAAGCTGTCTAACTAATGTATGAAAATGAAAGATTAATTGTTTTTCATCACAGGTTCTTT
TCAGAAGACTTGAGAATTTATTCTCAATGGCTGAAAACCCATTTGATGCACTGATTATGC
ATACATGGCGCTTGCACTTCAGTACATTATTTGCTATCACATCATATAATACAATTGTCG
TTTTTCACTTAAATGTTTCTGTTCAAAGTTCCCGCTGCAGCGCGGGGTATCTTCTAGTAT
AACCGGCCAATGAACCCGTCGACAGACAATGTGGATGTGTAAGCTAGCTAGTGGAGCAAG
AATAACACTTACTATGTGGAGATACTGACCAATGTACTTCATTTGACATCATTTAGTGTT
CATTCTTCTATGGTTAGGTCCTGGCCAATGGAGCTACACCAAAATTTGGAAATTATCCAT
TTTAAATAGCATGCCTCTCGTGTAACTTCGACAAAACATATGGGCATTTCCTATGCCCAA
GTAAGGGCAGTCCAGGTCTGCAAACAAATTGAAAAATACAGGTAGCCATTTAGGATTATA
TATGTCTAATAGTAGCTCTTAGATGACAAATGAAAGAATCTAACAGAGATGCATACAAAT
GACCTCTGTGAGATCGGAGAAGGCAGACATGTGGTGGGGGCTGGAGTGGTCCAGTGTAAG
AATGACCGCGTCGTCACAAGAGCAGGGAGCACACGGGGGGTCCCATCCTGGGGCATGGCT
GTGGAGGAGCAGACCTCGAGCACTCACGGCCAGTTCTAAGCCCTTCGTCGCAAGCTTCTA
ACCATGTGAATGTATGAAGAAAACCGGCTGTTCAACAGTACAGATGTTCCATGTGAGCAA
GGTGTTTTCTAGCCTGATTAGCATAGTTGACACTAAGCTCACACTTATACTACTGTACGA
GTCTGCACTCAGCACTCTCCAGGAGTAATTGCTACAAAGCTAAGATTGGTATATTCAACA
AAGCTAGTGGCAATTGGTCATGGGGTTGAAGCTTCATCATGTGGTCAACACAGTAGTAAA
ATCAATCTGACCAAAATTCACACAACGAAGACGGTGCTACTGAAGTGATACAACAGTTAC
CTACAGGATACATCACAGTGCACCAGAAATTCAGCACCCATCAACCAAAATCCAAAGCAT
TCCGCACATTGCGAAGATAAAGTTGTGGAATTGATTGCGGTGCGGGGCTGGATATATACA
TAGAGAGGACCGAGGAGGGGTGGGCTCGTGTTTGCTGATATCCGGGACTCGGCGGTTGCG
GAGCCGGTACGCGCTGTCAGGCCAGGCAGACGACCCCTTGCGCTTGGGCGGAGCCGGGGC
GTCGGCCTGCCGGAGGAGGAGGAGGAGGCATGGCGACATCATTCAAGAGACAACCTTGGT
CAAGGGGTGAAGATGATAGCGCGACGCTCGCTGCCGGAACGGAGCCCTCCGCAACGCCTC
CGCCCGACGTGCTGGAGGAATCGCCGCAATCGCGTCTTCCGAGCCCAGTTCGCTGTCAAG
GGGGTGGGGTGGTCGCGCAACCCTCGCAGACCCGCGCTTGCGCGGAGGAGCATGGACGAC
ATCGGCGCGCTTGGCCCGGCGTGCCGGAGGCTCCGTAACCTTCGCGTCGGGCCTGGACCG
CTCAGGCTGCCACTTGGATCTTCGGGGTTCGCTGGTGGCGTGCTTGCCATGGAGGCCAGT
CATCTCGGCGATTCCGGTGACGGCGAGCAGCGGGAGGGGTGGGACGGGCAGAATGGCGGC
GAGTGGCATGAGGGGCGGGGCGAGGCAGAAAGGGTGGTTGCGTCGAGCGGGGATGGGCTG
TAGGGCGGCAGGGCTGGGCTGGGGCTGTGCTTCAGGGCGGCGGGGGGCTGGGCTGCGGGG
CGACGGGGCTGGGCTCGGCTGCGGGGCGTCGGGGCTGTGCGGCGATGTGGGGGCCGGCGG
GGGGTGGGGGGGGCGGGGGGGGGAGGGGGGGGATAACTCCGGATAACGGACGCTGTTCGA
A