morexGenes - Barley RNA-seq Database

Contig contig_114193

Source Contig contig_114193

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_114193 (2689 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location

Predicted Genes from contig_114193

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_1612	1	431 bp	MLOC_1612.1	Available	Available	None

CDS Structure of MLOC_1612

Contig Sequence (2689 bp)

>contig_114193 2689 assembly3_WGSMorex_rbca.fasta
CCCCAGCCTCAACAACCATTTCCCCTGCAACCACAACAACCATTCCCCTGGCAACCACAA
CAACCATTTCTGCAGCCCCAACAACCAATTGCGCAGCAACCACAACAATCATTCTCGCAG
CAACCACAACAACCATTCCCTCTGCAACCGAAACAACCATTCCCCAAACTACCACAACAA
CCATTTCCCCAACAACCACAACAAATAATTTTCCAGCAACCCCAACAATCATACCATGTG
CAACCAAAACAACCATTTCCCCAACCCCAACCAGTCCCCCAGCACCGACCCCAACAAGCA
TCCCCCTACAACCGCAACAACCATTTCCCCAGGAATTAGAACAAATAATTCCCCAACAAC
CATTCCCTCTGCAACCACAACCATTCCCCCAACAACCACAACAACCATTTCCCCAGCCCC
AACCAGTCTCGGTGTAAATCTCAGTAGCAGCTTTATATCGAAGGGAGTGAGATGATGATG
ACTTCGTGTTGAATTTTGTAGTTATTTAAATGGTTTCTTTAATGGACCGGTTGCTCATAT
TAGAAAATATGGGCTTGCGCCATATCGAGTTTTTGGAAATGGACAAGATGAAGGGATGAT
TGAATTTATTCCTTCTATTTCTCGTGCACATGTAACTTGAGATTGCATATGGTAGCATTA
CAAGTTACTTACATAAGTTCCATAGACTAATTATGTCCACCTAGTATAGCTACCCAATGG
TCCGAAGCTTTTATTAAAATTAGTGTTGGTCATACTAAAATTAATATATTATGGGTATTG
GATGTAGGATGTTTTTTAAAACTTCCATCTCCTTTATTCATTCATAAGAATCATCGCATC
GTTTACAACCATGGGGACAATTTCCTCTGGGGTAGACTGTAAGAAAAGATTAGGATGGGA
ATATATATCCAATCTAGCCAATTCATGTACAAATATGGTTGGTTTCCATATAACGGGGTT
CATAAATTATATGAGTTAAAGTCTAAGGAAGTAAAATATCAGTCATCAAAAATAGCACTT
GCAATGAACGACAAGCTCCCCTCTTTGATGGTAGTGATCACTTCTATATTATCCTCATTG
ATCTCAAGTTTATTGCATCCGCTCATATGTGCAAGATTTAGACCAAACCTCCAGGATAGG
GCCTCTACTATAAAAGCATTATAACTGGAATCAACCTTCTCATTTGTATCTGCAATGAAT
TCCACATTGTTACCCTTTATCACCGCTCCAACAACACCCTGATATGAGTCAAGGATCAAA
CGATGCATCTATGTTGAGTTTTGCATGGTCTCTTAGGGATAGTGTCTGCTTCGCATTTTA
TGCAACTCTAGAAATTATGATAGCTATATAATCATCAAAATGTACGCCAAATTTGTGAAT
GCATTTTTTTTGGTTGTTGTATATTTAGCAATCTTCAACCATCAATTATGTACTACTGCA
TGTATGATACTATTCATGTTTTCTTTGAGGGAATGAGACTAATCATGTTGCTTTAGAGAA
AAACTTATGAATACAAATGAATAAACAAAGCAGTTTCTTGGCTATCGAAGCAGATTCTGA
GAAGGGTATGTGCATTATTGGGAATAAGCTTGTAAGCCACAGCCAGGCAGCAAGGTACAC
GGGACTCGGGGCGACCCTCGTCGATGCAGCCATGGTGAAGAAAATGCTCGACACCGTGCC
GGACCGGCTATACACCGTGGTGGCCGCCATCGAGAAGTTCTGTGACACTCATGCGTCCGT
TTAGGTGCTCGGGCGGTTGAAAGCGTTCGAGGAGTGGAGGTAGCAACGTACACACGCCGG
CGGTGAGCGGGCAGATGGGCAGCTGATGCTCACGACAGCCCAATGGGAGGCGCAGCGGCG
ACAGAAGGACGACGACTCCGACGACTACGAGGCATCAAGCGCGTCTTCGGGCAGCTGGAA
GAAGAGGTGCAGGCGCAATTACAACTGCGGGCAGCGGGGCCACTTCGAGCGCGACTGTCC
CAAACCGTGGAAGGTGCCGGCAGCGGAGCAGGCATTGCAGGCAGACGTTGGCGACGACTT
CGGCGGTCTGGGGCTCCTCTAGGCCGTAGCTTAGGGGGGTGTTGGAAAAGCTTGTAAGCC
ACGACCAGGTCGGCTCGGGCGCGTGTGCGTGAGCGCGCCAGGCTGAATCGACTGCGGCCA
TGGCAGGTGACTCGGGCATGTTGGGTGCGTGCGTGCGTGTGTGGCTGCGTGTACGGGGAA
GTCCTTGCGGATGCGCAGGGTGTGCGTGAGAATAGGTCTCCATCACCGAGGCTTGACCTG
TGTCCAGTGGCGGAGGTAGGGGTGCTGGCAAGGGTCGTGGCTCCCCCTATACTCTCACAA
ATACACCTATATGTAGTCCTAATCCTCCATTTGTCCAACAAAATTAGCAAGGTTTAGGTG
ATTTGGGCCCCTCTATCACTATATGGCATATTTTGGCCCCTTCTATATTCAGTTTCTGGC
TCCGCCACTGCATGTGTCCGACTCGTGTATGGGCATAGTCTGAATTGTGTCCGACTAGTG
TACAGGCCACGTATGGGTTGCGTACGGGAGCCTCTTGCCGCGCGTCTCCTCGCACAGTGC
CACGTGTTAGGCTAGGTGGGGGCGGCTGGAAAAATTCTCCTCCCGAATGAAAAATTTCCG
CCGGGGCAGCCCGAGAAGGCCAGAAAAATGCCTCCTGGGACACAGCGGG