morexGenes - Barley RNA-seq Database

Contig contig_114067

Source Contig contig_114067

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_114067 (4274 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location

Predicted Genes from contig_114067

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_1591	1	293 bp	None	Available	Available	None
MLOC_1589	15	1963 bp	MLOC_1589.1	Available	Available	LOC_Os10g30580.1, FRAME:+2, EVALUE:4e-92, 13110.m02634 protein cell division control protein 48 homolog E, putative, expressed
MLOC_1590	1	874 bp	MLOC_1590.1	Available	Available	None

CDS Structure of MLOC_1591

CDS Structure of MLOC_1589

CDS Structure of MLOC_1590

Contig Sequence (4274 bp)

>contig_114067 4274 assembly3_WGSMorex_rbca.fasta
GTTTATCTTATCTTATGATTTGATGAACATGAACATTAACTTGGTTGTGTGTGTGTATCT
TGATGACAGATCTTACACCCGTAGAGCATGACATTAACTAGGGCAACCTTCCTGCCGTCA
GTTAGCTTCTTGACCATGGCGCTGATCTGCATCAGCAATGCTCGGGAGACATCGCTCTTC
TTCAGCTGCAATCCGGGGTAATAAACAGACGGATCTTCCATTCGCTGTCATTTTCCTCTG
CCAAAGAGCAGGCCTTAGTTTCATGCTGAGGGTCTTCAATACTGCCATGCCATGCTCCCT
TGTTTTGTTTGTGGTCGTTTGGGTGTAAACAGACAGAAACAAAGATCCAACAGCCATTAT
CTGCAGAAGAGATGGCGAGGCGGAAACAAAGTTCAAACCATTCACTGGTTCAGGAAAACG
GCTGGATGGTAAGGGCCCGAAACAACAATCACCCGGAGCTTCTTCACCTGCTACGGCCGC
ATGTTCTGCACCTTCAGACTCAAACAAAAGGGCAATCAGCACCATGTGTCCTTTTCTTTG
ATGAGCTTTACTCTATTGCCACCCAGGTCAGTCTTTCTCGCTCTCCCTGTTAGATACTGA
ATTCTATGGCTGTTACAAACGACCATTTCAAGACTGCACTAACAACAAGCAACCCATCTG
CTCTCCGTGAAACTGTGAGTATTTGGCACGATCTCTTGTGTTGATTTTACATGTATCTGG
TTGTTTTGCACATGTTTTGAAGGTCTTAGCCGTCCTTTGTAAATTAGGTTGCTGAAGTTC
CCAATGTCTCTTGGGAAGATATTGGTGGTCTGGAAAATGTCAAACGGGAGTTGCAGGAGG
TATTTACTGCTCTTTCGGTTATCTATTCTCAACTTTGATGTTTCCTAGCTGTAACTTGTG
TATAATACAAATGAAACTATTGCAGACTGTCCAGTACCCTGTGGAGCATCCAGAGAAATT
CGAGAAGTTTGGCATGTCCCCTTCCAAAGGTGTTCTGTTCTATGGCCCTCCTCGGTGTGG
TAAAACCTTGTTGGCCAAGGCAATTGCAAATGAGTGCCAGGCTAACTTCATCAGTATCAA
GGGACCTGAGCTGCTTACCATGTGGTTTGGTGAGAGTCAGGCTAATGTACGTGAGATCTT
TGACAAGGCTAGGGGGTCAGCACCATGTGTCCCCTTCTTTGATGAGCTTGACTCTATTGC
TACCCAGGTCAGTCTTTCTCTCTCTCCCTGTTACTATGTTTCACTGTTGTGTTTCTTAAT
GGCTGACAACTCTTGAACCATGGTATTACAGAGAGGAAGTAGTGTTGGGGATGCTGGAGG
TTGAACTGGAACACATTTCACGAGACACCCATGGTTATGTTGGTGCTGATCTTGCTGCTC
TTTGTACCGAGGCTGCTCTCCATTGTCGGCCTCTTTTTTGGAACCATAACATAACTTTCT
TACTAGAGTTATTAGGGATTCTTATAACTAACAAGATTTCAAATAACAGTGCAGCACAGC
ACATCAAACACCGGTAGTGGTGTTTCACGAGTTTACAAACTTAGCAATTTCTCATTCATT
ACTTTTTCAGTTGTTCCATATGCTATATTTTTCCTGATTTCTGTCTTCTCTTTAATTTTC
AATAATGCACATTGAAGATGCTATCATCAGTGCCATTTTCTTTTTGTGAATAGGTTAACA
ATTACTCCCTTGTGGGGCTTGTTGTGGGTTATCCATTCAACTTACAGGGTCAATCTTCTC
CAGACGTACGATGCCCTTCTGGTAGAATAGTTCATCTGGTAGTATAGTTCACCTCCTCTT
TCACTTTATGTTTTCTAATGTTTACTTTTCTGTAAAGCAGGCATCACAAGTAATCCTTCT
CGTAGGAGAACTTTGTAAAACTGGGAAACATGATGATTTGAGCTACACATATTGGGATGA
ATTTTTTACCTCAAAGGTGATAGTTCCTTTCCTTTTGTGCGTCAAATAGGATAGGGTGTG
GACTGCAGTACTGTTTTGGCCATCATATACATTGTAGTCTTCTAAGAGACGAACCTCATG
TATGTAACACTCGTTGATATATTATGTGGACTGCAGTACTGTTTTGGCCTCCATCTACTG
GGGTTCCACCACCGATGCCTCGCCCCTCTATGCGCGAGCCGCCCTCCCCTGCATGCGCAT
GCGCTTATGTCATCCCACGCACGCCACCTGCCCCGACCCGATGCCTCAGCCGTCGAAGGG
TGCTGGTTGTTGAGGACAGGTCCTCAGCGAATGAGTCGAGGGTGGCAGTGCCCACATTGC
TCGGTGTTTTTTAATATGTCATTGTACTTTTGATTTCTTGAATACTTTATATGTTGTAAC
AATGATGCTTTAAATCTTTAGGAGAGACGATAGGAAACCAACTGTTGAAGCTGAGTATTG
CCTCGAGTAGAACTTTTTAGTTTCAGAGAATATGTCCTTATTTTATGCAATGTTTTGTCA
TGTTGATTATGACGAAGTTGTTTGAACATTTAACCATTGTTTATAAAGAAGAACAGATTT
GGTATGGCCTTCTTGCACAGGACCAAACCTAGCTCGGTTGGCAAGGTCGTGTTCAAATCG
GAGATTCAAGCTTGCCTCTCCATGTGCTTTATTGAGGTGGAGCAAATCTCTTGGTGACAC
CCAATTTATTGTTGGTGCGATGCGAGTGGTAGAGCTCCGCGTGGCACTGAAGAAAGATAC
CAACATGTTCAAAAATCAAAGGCGATGCAAGGGGCATAAAGAGGAGTGCCACATAGGAAA
CGATCCATGGTGGAAGGGACACTTCCGAGGCAATGAGATGCCGACGTGAAAACATCTAGC
TACAGAGAAGGGCCTTTGCTAAACAGAAATTCCTTTTAAATTGTTATAAATTTCAGTTTA
GACCAAATGTTATAAAAACCTGACATGTTATTGTGGCAACCATTGTGATAGACAAATCAA
TTTGAATAATCAAAACATTGAACATATGATTAACGCACGTGTGCACTGTTACTAGTGAGA
AGAAACTAGAAATGGATAAGAACGTGGGTTGCGGACGGGTGTCACCGGCTCAAAGGGAAG
AGTCTAGAAAAAAACAAATCTGGCCGTTGGTTTGTTACAACGTGAACAGTGATAAACAAG
GTGGAAAAGTGTGCAAGATCCGTTGGGTGATAGGAAACTTTTCCCAAAAATAATGCCATG
GCACCTCTTTCAAGAAAATAACCTAAGCGTTGCGCGATGAGTGCGCGCTATCGAGCGTGC
TCGAGCGGCCGCCTGAGAACCCTCCACCATGGTGCAAACCCACGACACGTGGTGGTCGAC
CGCCGAAGGTTTTGTCGCTTTCCCCTTTGAGTTTTCGAGAGAACCGCCCAGATTTGTTTC
CAGCGACGAGTCAGGCGGCGGGAAAGGCAACTGGACCCGCGCGCGTGACGAGAGGAAGAG
GGAGGGAGAAGGGAGCGGGAAGGAGCTGCTGGCTTGCGCGAGGCGGGCAGACAACCAGGA
GGCGACGAGGGATCCTTCTCCATCAACGACCTCGAGGTCAATTTTCGCTCACACGTCTCG
GGTTGGCGGGGCTTCCTCGCCGACGCTCATTGTCGTCAATAGCCACGAGCGGGAGGGGCG
GGGGGAGATGCACCAGATTGGGGACTTGGGGTCTGTTCATGAGGCGTTGAGGGGAGTGGG
GTTGGGTGTGTCATAGGCTCGGAGATGGGTGCGGGCGGAGCTGGTGGCGCTCCCGGTATT
TGCATCACTCGCTACTGATGGGATAAAAGCAGCAGCCCCTGGGAAACTGAAACTGATGGT
GGTGCTCCAGATTTCCACGAAGGAGGCGCTGCCATGTGCAGGCAACAACAATTGAACCTG
TGTGCTGCTGGTTGTTGTGTTGGGGGGAGGATGAATCACGTGTGTCTATCGAGAGGGTAG
TCGACGCGCTGCGAGCCCGCGTGCAATCCCGCATCATCCACATGATGCCGTGTCGGTTTT
TGTAACGCACCATCGAACATAGTGGGATTCCACTGTCGAAACAGAGATTTATCTGTTTTT
CGTAGGCAATATAATGTGTGTTTGTAGGCGATTTAGCTTCAAAATATATTTCGCATACTC
GCATACCATCTGTTTTTGACTTGAGCTCGCTCGGATTTTACAGGGTTAAGGCCTCATGAC
AATATTATCTACCCCTGAATATACTGCTCTGTTTTGGGGATAAAAGGAGGTTCAACTCCA
ATGTGTTTTGGATTTGTATGGGGTGGGGGGGGGGGGGGGGGGGGGGGGCAATTGGGGGGG
GGGGGGGGGGGGGG