Contig Data
morexGenes
Links



Map Locations of contig_114064 (2777 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_114064

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_1588 2 1272 bp MLOC_1588.1 Available Available LOC_Os06g13900.1, FRAME:-1, EVALUE:1e-75, 13106.m01536 protein transposon protein, putative, unclassified





CDS Structure of MLOC_1588






Contig Sequence (2777 bp)

>contig_114064 2777 assembly3_WGSMorex_rbca.fasta
AGTCAACCATGTACTCTTGGGCACCCATCTGCTTACAGCTGTAGGACAACAGTGACTGCA
TCTCCCCCTGGAACCTAACAAAAATATTGCGCATATAGATACTTGACATCTGGAGCTCAA
TTGGGTTGTAACTCCCCTTCCTAGCTGTGGTGATTGTTGTGTCTGCATCCTGCTTGCTCT
CCGCACACATTATTTTCTCTTGTATGGCAGCATATTGGCGAATAAAGTCCATGATTGAGT
TTTGTGGGTTGACATACTTTTTGAGCACAGCATTGAAGCCTTCANNNCTTTGCGTGGTCT
GGAGAAAGGGGTAGAACTTGTGCATAAAGTAGACAGGAACCCAGCATGTTCGTTTCTCAT
ACAAATAAACAAAGTCTAGGTGTTCTGCAACCCCATGTTGCTGAACCATTGCAAGCCACC
TTGCTTCAAACTCCTCAGGAGCGTAGTTGTCATTGACACAATTGTTGAACTCAGCTTGCA
ACTCTGGGCGTTTCGCTAGGAACAGACCAAGCTTCTCAGTTGCATTTTGCATTATGTGCC
AACGACAGTTTCGGTGTGTTGTATTGGGAAAAACATCCTGAATAGCAGACCTCATGGCAA
AATCTTGATCAGTTATGATATTGGTTGGAGCCAAACCACCCATTGCCTCTAGGAATGTCT
CAAATAGCCAAACAAAGCTTGTCGATAACTCGTTCCTAACGAAACCACAACCAAACTGAA
TTGACTGTCCATGGTTGTTTATACCAATAAACGGGGCACAAGGCATCTTGTATATATTGG
TCAAGTAGGTTGTGTCAAAAGAGACACAATCACTGAAAAACTTGTATGCCCTTCTCGCTG
AACCATCAATCCAGTAAATGCACTGGACCTTATCATCATCATCATCAAGCTTGTACTTGT
AAAAAAAGTCTTTATCAAGTTGTTGACTGCTCTTGAAGTACTCAATCGTGTCCTGCATAT
CAGTATATTTGTGCTCGGCCCGAAATTTGCCAGCAGGTTTGCCAAGTCTTTATAAGTGTA
TCCAATTGCTTCACGTTGGCCACGCAACTCTGTCAACAGCTGCATCTGTCTAGAAGGTTC
CAGATTGCACGAGTGAAGGAACTTCACAAACTATTGTTCTTCTTCAGGGATATGTCTATG
TGATCATAGGAACCCTGTCAGCGACCACTTCTTGATGAGAGGGTGGTTATGGTCGTCATT
TATTTCTGTAACAACCGAGGCATTATCTATCCGGTTCACAACCATACGGGCTGTGCAGTT
TGTTCTTTCAGTTGTATTCCTCCACCTCTCAGGGGCAATAGGTTGCGGGTTTTGGGTGTC
TACTTTCTTCTTGATCTTCAACCTAGCTCTATGGCACACAAGGCATGCTCTTATCAGTTC
ACCACTAGCCTCCGACTTTTTTCTGAAACAGTACCTCACTCCAAAACCTTTCTACCTTGC
ATACATTTTGTAGTGTTTTTCAGCATCCTCAAGAGTGTCAAATCTCATCATGGTTGTGGG
TTGCTGTGGCGTGGACATCACCTCCGGCATGCCTTCATCCTCATTTGCATTGTCATCATT
TGGTGTGCGATTAGACGATGCATCCATCGTTTGGTCCGTGTTGGCCGGTCGTTGTAACAC
AGTGTGTGATGCACCGACAGTCTCACGATCTGCATAACACACATAGGAGGTCAATTCTGG
TAACTAAGCAGTTTTAATCTGGTAATCAGTTGTGATGCATAACACACATAAGAGGTCAAC
TCTGGTAAGTAAGCAGTTGTAATCTGGTAAGTAAGCAACTGTAATCTGGCAAGTAAGCAT
TTGTAATCTGGTAACAAAAGCACTTTTTTTGTAATATGATGACTAGCTACTTGTAATTTG
GCAAGTAGACATTTTATACAGTGACAATAGGTCAACTCATCCATGTAGCTAGAGGTAGGC
CATGGGGTGAAAATATTTGGTAGGCCATGTCTGAATTTTTGGTAATCAGGCAACATGACA
ACTACTTTTTAGCAACCTGACAACTAAGTAATACTTAATCTAGGAAATAAGCTTTTTTCT
AAAATGATAAGCAAGTACTTAGATCCTGGTGAGTGAGCACGGTTAATCTGGTGAGTGAGA
ACGGTTAATATGGCAACTAGCGCGCAAGCCAACAACCAATTATAATTGGAGAAACTTAAA
GTAAATAACACCATGCACATGCATCAGGGAAGCAAGCAGTTTGTAATCTGGTAACAAAGT
ACTTTTGTAATATGATGACACAATTAGATGGTGGTGCTTTAGGTGGAAAATTTAGGAATT
ATGGTAGCAGCAAAAACACGACAAAAACAACAATTAAATTGGTAACTACATGGAGGGAGG
GACAAACCCGTGTCATGAGCAGCCACAAAGTGAAAATCCATCTATATATGTGTCCTTTCT
CTTGTTGTTTTCTTTTTGGGAAGCCCTTCCTCCACCTGCATGTTTTTGTTCCAGATGGAG
ACAATATATCAGTGTTTTTTTCTGACTTTTTTGTTCTGGGACAGGGGAATTGAAAAGAGG
ATCAGAAGCTGAAGATCCAGAAGGGAGAAAGAGAGGTGCAAATATGTGGGTGCAGAGAGA
AAGATAGGTGTTGTCTTTTGAGGGGGAGAAACAAGAGATCTGATTGTGCTGTAATTTGTA
CATGTTCTTGGTAGTTTTTTTTTCTGCAAGTAGATTCATGTTTTGTTGGAATGATCCTGG
TATGGGGCAGTTGCGTACCTGTTATTTTTTTGCTGCTTTGGATAACTTAGAAAACTGCAG
AATTCACCTTCTTCTTG