Contig Data
morexGenes
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Map Locations of contig_11360 (1603 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_11360

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_1538 2 1319 bp MLOC_1538.1 Available Available LOC_Os01g51700.1, FRAME:-2, EVALUE:1e-69, 13101.m05396 protein ras-related protein, putative, expressed





CDS Structure of MLOC_1538






Contig Sequence (1603 bp)

>contig_11360 1603 assembly3_WGSMorex_rbca.fasta
GGCGTGTGTTTGTTTGGGTGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGCATGGACCATG
TTGGCCCCCTAACTAAGCTCCGCCACTGGCAAAAGGTTGGGTATTGATATGCTTTCATTG
CTCCATTGCAGTTCTAGAGATGTTGATGGCACCTGTGCAACTTTAATAAGTTGCCAGTTT
GCATAGCGAAACTGCTGAAGTATGAAAGTTCGCAAGGTAACTGAATATGTCATCATAGCA
AAGTATAACTGCGCCTATATGAGCAGTTTATTGCCTTATAGGCATTTATTGCTCTTAAAG
AACACAGAGAAAAAAAGATACTCCAGCATGCTCAGATCTGATGGAGTACTATGTTGGCAT
GCTGAAGCCTTAGAAACACAATGGCATCATCATATCAAGCTGTCATCTCATAAGAGCAAT
GTTGGAAGAACAAATGATGAATTTCTCTACATTGTATATGTACAACCATGATCAGGCATC
AAATGACATGGAAGATAAAATAATCTTACCTGGTTGAGGAACTCATCATGCCATGTGTTG
AGCGTATCAAATGACTTGTTAACATTGACATCATAAACAAGCACACAACAATCTGCCCCT
CTGTAGAATGCGACACCAAGACTCTGGAATCTCTCCTGCCCCGCGGTGTCCCAGATCTAG
AAACAGAGCAAGCCCAGATGTAATTACAACAGCAGTCCATTTCTTCACTGTCAAGAGAGC
TGCAACTAGGCATTCCACTCACCTGCAATGTGACAAGCCTGTCTTCAATGAGGACCTCCT
TGGTGACGAAATCCGCACCAATGGTAGCTTTGTACTGCTGGCTAAACTTGTTGTGAACAT
ATCTAGATAAAAGTCAAGCATAGCAAAGCACAGAAAGTAGTAACACGAGCCTAACATTTC
GGAGCACAAACATCGGCGTACTTCTCCCAATCCCATCTTGCTAAACTGAATCATATCCTC
ACATACCCATGCACCAGAAGAGATTTTGACCACAAAATCCTGGCTATCACACAACAGAAA
TAATGAAACGGACGGCATGCAGCTAAACATAGGCCCACGACGAGACGAGCCTACGGAATT
CATATTCAGAAACGGGGGTTCGCTGCCAAATGTGTTCCTGCAGCTAAATGGGTCAAACGC
TTACGAGTAAAAGACACAAATTTTGCACATGGTCGGGCACCGGCGCGTCAATTGCTTAGA
GGAGCTAGCAAAAACGAGAAAAATACAGCAGAACATGGATCAACCCGAGAACGATTAAGC
GACGGCAGACCAAATGCGGGCCCATTAGGGGTCAAGGCTAGGATACTGGTTCATCAGCGA
CGTCTTCCCGACCCTGCACACAGGACGAGCAAATCAGACAAGCACGGGATTACAGCCACG
CCCAAATCGAGCGCCCCAGCCCAAAAAAACTAAAAATTTCGCAGAAATTGGTGGAATCCG
CCGGGGGGCGGATCCGGGGGTGGGCAGGGAATGGGCTGACCCGCTGTCGCCGAGGACGAT
GACCTTGAGGAGGGTCCGCCTGCGCGAGGTCGACATGGCTGGGGGCGATCGCGATCGATC
TCTGCCCGCGGCTTGTCGGCTCGTGGCGAGGCGCACGGGGGGG