Contig Data
morexGenes
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Map Locations of contig_113413 (4238 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_113413

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_1516 1 618 bp AK250388.1 Not available Available None
MLOC_1517 1 738 bp AK250388.1 Available Available None





CDS Structure of MLOC_1516






CDS Structure of MLOC_1517






Contig Sequence (4238 bp)

>contig_113413 4238 assembly3_WGSMorex_rbca.fasta
GCATTAAGGAAATGATGAGTCGAATGGCCGGCGATGCGTCACAAGACGGTAATGTAACAT
TTCATCTCTAATTTCCATGATGCTTGATGCAGAAGAGGAGCTAATATACTGATGGCAGTT
CAAAGGAGAGATATAGGTTTGGTCCTTTGTCGGGGAGCTACACTAAAAAATTCTACCATA
CATGTTGTGAGACTCCTGGCACTAGGGCAACACTAAGTATTACAACAACAAGGAGTGCAA
CGGCCAGCGGCGCGTCTCACTTGGCATGGAGAAAAGTGGTAGTGCCATGCATGTTTCATT
AGTCCCGTTTCTTTTAATTGATGGTTCTCATATGTTGAAATTTCTGTTATTTATAATTAA
TCCTCCTCATGTCTTGATAGCCATGTATTTGTTGATGTCTTGGGTTGAAAATTGGATTGA
TCGTGACTTTGTTCCAGTTTTGCTAGACTGTAGCTGGGATTTCTACTAATGTAAGATGTG
AAGTGATAATGGCATTTATATTGCTGCAAATATAATATATAATTATGCTATTATGCTGTC
TCTCTCCGTACGTGTTCTTTTGATGGTAGGTTATCTTTGCTGATGAGAATTTATTCCTCT
TTGTAGTATATGAGAATTCATGAACAATGTCAGCTGAAAGCATGATATTTTTAGGTCATA
TTTTCCATGAAATTTATTGTATTTTACTACTTTCTATATGATTTAATTCATAGCAGGAGA
TAGTTCTTGACCACACCAACAACATACAAATGAAAACAATTAAGAAAAGAGGGAGTAGTT
CCCTTGCCATTCTTGCCTCCACCGACCCCAAAATGCCTGCATCATAGTTCAGGACAAAAT
GTTGAGAGTGCCACACAGAAGGAAAATAAATGCTTAGTTCAAGAGAAAAGGAACATACCT
CTTGATGCTGCGCTGGGAGCAGTGCTTGCAGCTCTGGCACTACAACTTCAACACAATCTT
CCTGAATAAAATTAAAAGAAGGAATATTTTCTTGCATTTGTGAACAAAATTTCAAAATCA
TGTGATGAGATATGAACATAATGTGGTCATCGCCATTGAAGATGGTGATTTGTTTTTCTC
CCGTTGCAACCGGGCCCTTTTCCTAGTGTTACAAAATTGTTGTACCGACACTTTTGTTTT
TTAATGTTTGGATTTTATCATCTAGTCGCAGGAAACACGGGTTAAAATAAATGGTGGTTT
GGAGGATTAACTTGAATGCTACAAACTTCTTAAATATCCCATCCTTTATTTTTGTTGGTT
TGAGAAATATCCTTTTCTTGTTCTGAGGGAAAGCGCTCCTGCAGTTTGAACACGGGCTAC
AGAAAGCATCCTTGTTGGGCCGTTATGGCCAGCCCACCTCCACGGCGCGACCCCAAAGCC
TGCAGCGGGGGCAATGTATCCGAGCGCCGTAACCTAAACCCTGACCCCTCCCTCTCATAG
CGCCTCCTCCCCGACCCCGACGCCCCCCTTCTCGCTCCCGCGTCTCTCCGGCGGCCACCG
ACCCTCTCCGGCGATGTCGGTTCCCCGTAAGCAAGGTGAGTTCCTGCCCCTCTCCGCTCT
CCACACCCTCTCCTTTCTTGGACCGTTCCGCCGCCGATTCTGTGCAGCCGCCGGCCAAAA
CTGAAACAAAAGTCCCCTCCTTTCGAACCCTGGGCTGCGCCGTCGCATCCTTCGGAATCG
CGTTATATTTGGTTCTGTAGATTAACGATGTGCTTTCTTTCGTGCAGCGAAAATGGTGGC
GCTCGAAAAAGAAGAGGATCCCTTGGTCCACGACGAAGCCATGATGGATGACGACGATAC
TGACGACGACTATGTGGAGTCGGAGGACGACGATTCAGAGGAGGAGTTGCAGGCCGAACC
TTCGAAGAAGGCCGTGTACAACAAGGAGGGGCTCCTCGAGAAGCTCGAGGACATCGCCTG
GCCGGAGGATGTGGACTGGATGCACAAGCTCACCGTCGACCATGACCAGGGGGAGAAGGT
CGATGTGAACGACGATCTGACCCGCGAGCTCGCCTTCTACACCCAGGCCTTGGACGGCAC
GAGGCAGGCCTTTGAGAAGCTGCAGTCCAGGAAGGTCCGGTTCCTCAGGCCCGCGGATTA
CTACGCGGAGATGGTCAAGACCGACTCTCACATGCACAAGATCAAAGGGAAGCTCCTGTT
CGAGAAGAAGAAGATTGAGGAGGCCGAGGAGAGGAAGAAGGCGCGCGAGTCGAAGAAGCG
ATCGAAGGAGGTGCAGGCAGAGAAGCTCAAGGAGAGGGCCAAGGAGAAGAAGGAGAGCAT
CGAGTCGGTCAAGAAGTGGAGGAAGCAGAGGCAGCAGGGGGGATTTTCCAAGGGGAATGA
AGACGGCCCAAACCTCAACTTTGAAGTTGAAGAGGGACTCAAGCAACACAAGAAGCAGAG
GCCTGGCGTCTCTCCCGGTGATAGGTCTGGTGGTCGTGCTAAGCGAGGTAAGCAAGGAAA
GAACCATAGGTCAAAGGATTCCAAGTTTGGGCATGGCGGTCGCAAAGGGATGAAGAAGCA
AAACACTGCTGAGACGACGAATGACTTCAGAGGGTTTAACAACCAGAAGGGCGAGTCAGG
AAACAAGAAGAGGAAGATGTTTTGATACGGTGTTGTAAGAGTCTGTGCCTGCTTCCTTGT
GACACTATTATATTCTTGTCTTTATGTTATTTTGCTGCAGTACTCTATCACTAGATGCAA
AAGTTAGCTTGAGGTATGGAATTTGGGGAGGCAGCTCAAACACAAGACTATTATCTTTAG
CTGTGCTATTCTCCATAAGATGGGTGCTGTTTGCATTTAACCTGTGATTGCACTTTTGGT
CGTGGAATGGAGCTGAACTTACTATCTTTGCAATTGTGTTACACAGTTTATTGCAGTTTG
CAGCTGCTGTGCGTGTCTTCCTGTTGTTTACTTTGTTCTGCAGGGTTTTATTGTATTCGT
GTGGAAGCTATAGTGAAAGGAGCAATACTTGGTAATTGTGACTGCTAGTACAGTCAAGTC
TTGGTTTCTTAAATTATGCCCCCCTATACATCTTGCATCAGCTACAGACCTCAGTGTATC
ACAATGAGCATCAAATTCATCCTCTTTTTCTGCTGTTTTGACTTTTGATAGTGAATGGTT
TGGTTTTTCATGCTCCAATGGGACTAAACAGATTTGGTTGTGATACATTGTTTTTTCTTA
TTGCTATGGACGGCCAGATGCAGTTGGGATCATTTTTTTTTCTTGCTGATTTTGATTGTT
GGGACGACTATTGCATTACCGACAGAACCAATATGAGCTGCACTGCTTGCGATGAATGCA
TATGCCTAAATTCTCCAAGTTGCAGCTTGGCTAGTTATGTCTGTCAATGTTTTGTTTTTC
TTATGTCATTGCCTGTTGCGATGCTACACTCTTGTCTGGAAAATATCGGCCCTATAAATT
ACAATGCTAGTCTTTTCCTTCTTCTTTTTCTCTATATTGTGGCAATTATCGTCTTGGTTG
CTGGTACTTCTCCACTGAGGGGATCTGATCAATAGGCCTGATAAAGCCTAACAACCGCTA
CTGTTTTGTGCTGAAAATACTTCCAAATGTTCGTAAAATAGCAAAAAGAATGTAGAAGAT
GGATGTGGTGGTTACTTGGTATCAGATTCTAAAGATAACCCTGTTCAGATTATTTGGGTT
CGTGCCATCCTCTGCAAGGAACCAATTTCCATGAGGTACTGCTGGAAGAGGGTGGTGTAG
GATCTCTTCTGTCTGACCATGTTGTAATATGAGAAGCCTTCTCATTGTGTCAGGATCTAT
CTCAGGCTCAGCAACTTTGCCTTCTTCTCTAGTTGGAGGAGCTTGTGGTAGATCTTAAGG
GGCATGGTTGAACGACTGGTTGGCTGAAAGGAGGTGGTAGAACCTGATTGTTTTACTCGA
AGGCGGCTGAAGATGGAACACATTTTGACTGGGGGCTACAGGCGTCACAGGGTTGGCTAT
TGTTGGATTGAGAGCATTGCCAGTGCCAGATGCTTTCTGGAAATAGGAGAGACGAATACA
TAAGGAAAAAATGAACTGAAGATGAACTGCAGAGGTCCTTATGTTATGTGGTGCTACAAT
ATACTCCCTCCGGTCCTTTTTAGTCTGCATATTAGCTTTGTCCGAAGTCAAAGTATCTCT
ACTTTGACCAAATTTATAGAAACATGTATCAACATTCACAATGTCAAATTAATATTGTTA
GATTCATTGCGAAAGGTAGTTTCATGATATGTATATTT