Contig Data
morexGenes
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Map Locations of contig_113147 (4685 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_113147

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_1491 2 869 bp AK357201 Available Available None
MLOC_1490 1 271 bp None Available Available None





CDS Structure of MLOC_1491






CDS Structure of MLOC_1490






Contig Sequence (4685 bp)

>contig_113147 4685 assembly3_WGSMorex_rbca.fasta
CCGACGGACGAGACAGCGCGATCGGCGGCCGGTTGAACACAATCTTTTCCCAAAAAGAAT
AGGTATAAGTGTTCAAACAAAATGGAACCACACACGAAAATAAAACTGAAAAAAAGCAAC
AACAACTGAAAAAATAAAATGCAAAAAATGAAATAAATTACTAGAAAAGCATATAAAGAA
TAATCAAGAAAGGTGAAAAGGAAGATAAAAAGGCAAATTAATGCAGGAAAAGAAAAAAAT
CTAAAAGGTTCCAACCAACAAGCAATATGTTGGATATAACTTTGAAAAATGTGTTATTGC
CCAACCATGACACGTCATATCATGTGGTAAGCAATCAAAACAATTTTAAAAGACACGTCA
TATATGTAGAGTGAAAAAAATTGAAAACTCTCACGTTACACCAAATAGGCTACTAGCTCC
CCAGCTCCAAAAAAAAATGCTGATAGTCCCAATCTAAAAAACAAATGCTACTGGTGCAAC
CATAAAAAAGCCCATCAATACTTGCAGGTCAAACCCAGAGCGTGGCAACATAAAAATGAC
TAAAAGCCCACCACTGCTTGACAAATGAGAAACTGGCCGCATGCGAAAACAAAAACAGCC
AACCACGGGCCACGTTACCCAGTACAACGATTTCATGAGACCACTATGCGTAAGTTTCAA
GCCAACAGGTGAACTCATGAATGAGACCAAATTAAATCTCAACTCAGCTAGCTGAGTTCT
AGCAATCCCAAACAAAGAAACTTCTCCAAAAGACAAGACCCTCTTAAACTGAGAAATTGA
TGCAGCAAAGATCTGATGCACACGTTACGCAACCGTTGCAACTGATGCGCATCCATATGC
AAATATGGTAGACATTCACATCTACTCCCTCTGTCCCATAATATAAGAGCGTTGGACGAA
ACATTAACATCTACTCCCTCTGTCCCATAATATAAGAGCGTTAGACGAAACACTCTTATA
TTATGGGACGACGGAGGGACAAACTGGCATCTCAAATCATCTGTTTACCAAAAGACCAAA
AAATTCTACAACGCAAGCAGCTTCCAGTTGCCCTGTTTTGGGTCTGGAGTTGGCTTCTAG
TACCTCATGCTACATGCCTAAAGTCCAAATATCAAGGGAAACCATAGGACACTGTATGAT
TAACTCTATGTAGGACAGATTAGAAGTTGTATATATGCAACCTTGCAAATATTAACATAA
TTACATTTGTGGGGAATGAATGGAGAGCAAGGAAGTGGTAGCGCCTTTGTTGCCTCTACT
GCACCTAGGTACACTTCGTGCCGGAATGAAGCACACCACCCACAAGCTTAACGGCGCCAC
TCTTCCAAGGTTGGTGTTTCCACGCCGATGGTCTTCATATCTCTGATATTTGCTGCGAAA
CATAAACTAGCTGCCTTAAGTCACCGCTTATAGTAAATCATAGGAATCAGATTAAAAAGA
ATTAACAAACTTTTCATTTTCTCTCAACTATTGAAGATGACAACATTGCATTCAGGAACG
TGGGTCGTAGATATAGTTGTGTTCTTTACAAAGTAACTTGTAACTTTCTAACTGGGCCAT
CAAACTGCCCCATAATAAGCATTCCACTACATGTAATTTCCAAACCATAGATGCCACATA
ATTTACGTATGCTGATTGGTGCAATAAAGCCAGGTAATAAATCAATGGTGACCTTGAACA
GGGTTGCAGCATGAGTTCGATTTCTTCAAAATCAATAATTTTATATGGTGTATAGGGAAT
GCACTTCTGTGTGTCCTTTAACTGATACATTTATATGGCCATGTAACAGCGGAAAAAAAA
AAGACAGGGTTCGATGATCTATGAATCAATCATTCACTTAATAGTAAACCTAAGGAATCA
AAGGCAGCAAACAAAAACTTTATGAACTGTCAAAGAGGAAAGGTTTCAGTCACCAAAGTG
AGCTATACATAATAATTCATGAAAGAATTTTGCTCCCCGTGTATTATTTTAAACAAAGCA
TACCTTCTGTTGGTGACCAAAATGTCCCCTCAAAGTTCAAACTTATATCATGCACTTTCT
AAACTGTGTGTGCCACATAATGTATACATGCATGATGTCATCAAGACAAGAGTCATGAAT
TTGGATGCGGCATGAGTAAAATTCCATATTTTTCAAATTTCTAATGTTTTTATGCGTAAA
CAAAATATTCAGCTTACGTTTGTAGAAACAACTCAAGATTTACATTTAGTAAATTGTGTA
CTGATGCAGACCCACACTTTGAGCGTGTTCTGGTAATAAAGTAGTTAAATTATGCCACTT
AAACAAAGCGTACCTATGCAGTAGGAAAACCAATTTCACAAAGCTGCGATACAGATTATA
CCTTCAACTGAGTGTACCTCTTAGTGCATGCCCATGAGAGGAAACAAAGGGTCATAAAAG
GTGAATTTTATTAACACGGAAATTAACTTTCAAGCTTTTCCTGTTTAATATCAATTATCA
TGTCAACATTAGTTTAAACATATGCATAAGGAATCACCCAGAGCCAGCTTCATACGTATT
TGACGTGGAGAGTAAAATAGAAGGGCTAGCGCGAAAGAAGAGTGCTCACCCAAATGGATA
TCTGGCCTAGCAGCAGCTGTTGCATCAATAAGGACCATAACTTTCTCATAGTCCAATTCC
ACAGCATCGTAGACAGTCTGCCGGATGCAATTTGGAGTTTGGACACCTGAAAATCATCAC
ATATATATACAACAGTAAATGTGGCTGCCGATGTGATGTTGGACAATCAAGCGAAAACAA
AGGAAGCGATATTTGTTCTAAACAAGGTTTTTCCTACATGTTGTGCTGAACTCTACATCA
TAAACAATGGAAGCGATCTTTGTTCCTCACAAATTTTAAAAATATTGCTGCATTATACAA
AATTTCCCTTTATGGGATTCACGCTTGTAAGGGCAGAGTTATTGCCACCATATGCATTTT
GAAAACATGAGACAGGGTATAAACTGCAACAGGAATCAGAAGAAAGTAATGATACAGTTA
AAGAAAAGAAACCGACCTTAAAGCAACCAATTACCATTGTAACAAAAAAAAACTTTTACT
AAGTGAGTGTGTATCAGTGCTTACCAACAATTACCAAGTTCTTTATTCCTTGTGTCTTAA
GAACGGAATCAAGGTGTGTCGCAAAGAAAGCACTAAATCTTGTCTTCACTAACTTGTAGT
CGCCTTCTTTGATAAAAAGCCCATCAGCCAGCTCTGCACCTTTCAAACCTTTCACTGTTG
GACCCTTTCCTCCAGAGTACAAGTGTCTGCGAAAAAGTTCAACATCTCTTCCAGAAGGGT
CATGCTCTCTGACAACCTACATAGTAAAGTTCATTGTCAATCAATACCCAGACTCTAAGA
ATGGTGACAGTGCCTAGACATCCAAATTACTAGAAACCACGCTAGTTGGTGAAGAAAATA
GGGGAAAGTGTGATTACACAAACAGAGGCTAAGCTTGCAGATTGCAATATTCATGATCAA
ATTAGTATCACAAAGCATGTTTAGCAGAATTTAGAACGGAATGTGCTTCAGTACAACCAA
TAGGAAACTGATGAATACCTTGCACACACACCACAATGAAGCAAAAGAGGTTATTCCAAA
ATTGACAATGTGTGCGCTGCATAATACCAGAATTGAGACCATGCTAGCTGGAGTATTCAT
TTTGCATCAGATTTTAAAATAACACCAAACCATTACAAACATCTGACAACACTCAACTTT
CTACTTTATCTAGAAAGAAACAAATAAGGCATACCAACAAGTCAACAAACCACTTAATTC
AGCGACCCTCAAATGCCCTGATTGGAAACTTTGATTAGAGAGAATAATACGACTATTGTG
TCACGTTCGTGATACATGGCGAAATGTGGAATGTTATCATGTCATTTGGTGCCCTACATG
AAACAGTAAAACAGAAAGGGAATTGTTCGAACTTGTAACCGAATCAGGGTAGAGGCCAAA
GCCAAATACCTCACCATCTGTCAGCAATTTAATGATTAAACAAGAACAATCACTTTTATG
ATTAAAAAACGTTGAAGAAGAAATACGGCTAGTAACTTGTGCAAAGCAGGACATTCATCA
AAAATAAAAAAACAAGTGAGTGGATTCTGGGAAGAGCGAAGGTCTCATCCTGCAGCAGAC
AGTTGTTGAACTTGACAAGGAAAATAGTAGGACTTCTACATTATTAGAACACAAGGGGGA
TTGCAAGGCTAATCGAACTTAACCAGCAAAACAGGAACCGTAGCGCCACGCCGGTAAGAG
ATTACACAGAACACGTATTAGAATGGATCGCTCCCAAGAAATTAGAGGCCCGTATTGCAT
AGAAAGAAATCAGAGAATAGGCAAAGCGGCACTAGAAAAGAGGAGCGGTAATTACCCAGA
CGACGAAGATGCCGCGCTCCCGCGCCACGGCGACGGCCTCAGCGACGGCGGGGACGACGG
CCTCGCCGCCGGCGACCAGCACCGGGCTGCCCATCGCCGGGTCCACGAAATCCTTCTGCG
ACAACCCACAAGCAGGCAGGTCAGGCGACCCACCGAACAAGGAATCCCGAACAAAAGCTG
GATTCTTTCCTCACAACAAAGGAANNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGCATA
ATATTTTCAAAAACCTAACATTCTCCAAATTTCCCCCCCCCCCCTCTCCCCCCCCCTCCC
CCCCT