| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_112388
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_1425 |
1 |
266 bp |
MLOC_1425.1 |
Available |
Available |
LOC_Os10g39410.1, FRAME:+3, EVALUE:2e-34, 13110.m03607 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed |
CDS Structure of MLOC_1425
Contig Sequence (4876 bp)
>contig_112388 4876 assembly3_WGSMorex_rbca.fasta
GGGTTTTGCCCCGAACCGGGACTAATGAGGTGAATCGAACCGGGACCAATGCCCTGGCAA
ACTGAACCGGGGCCAATGCGTGGCATTGGTCCTGGTTTTCGTTTGAACCGGAACTAATGG
TCTTTCGGCACCTTTTTTCTATTAGTGATGGCGGCGGCACACTTTTGAAGTGTGTCGGTT
CGGTGTGTAACCTAGTCCCCACACGTTGCTAGGCTAGGGCATCCGGCTTTAGATATTAGG
CTTTAGTGTGATGTCTGTTTGGTATTTGACTCGGATATTCCGCACCCATTTCATCAAAAG
AATATGAGTAGCAACATATGTTATCAAGATGATGGCTTTAGGCTTATTCATATATTAATT
TGTATGATCTTTATAAATAATTAATAAAATAGCTACATGAAAGACCGGTAGTATATCCTC
TTTTTTCAAAAACAATACAACATAATAACATCAGTTCTCAGCGCCAATCTTAACGCGAGA
ACGGATGGACACAGAGTTCTATGACAAGGAACTGAAAAACAAAGACTGAAAAAAAGCACA
TCCGGTCTTTTTTGATGGAATTTTCCGTCTCTCCATCCTATCATGGACAAAATCTCGTAG
TCCTGTCTTGTCGTTGAAACGGCCCTGGTAGTGAAGATCACGACCATATTTAGCAAAACG
AAAAAAAGAACAAGCGTAGTGCACTCCAGCCAGCAGGATCAATAGAAAAACGATAAAGTC
GCTGACCGTGCTACGAGCACCAATGCAACAGTACGACGACAAACAGGCTGACCTGATGCA
AATGTTTTCTGTATATATACTTGATCACTTTGTGCCAACTGCCAGGAGAAGGACAGAATG
CAACTCTCAGTGCTAATTAATGAAGCACACGTCGGAGCCGGAATATTGAAACATGGCTTC
ACCCCTAGTTCACACACACCTAATGCGAACCGTAAAATAAAAACTATAAAAGAAGTCAAA
CAATTCTAACAATTTTAACAAATATGGTCGAGCGCTCTACTGAATTGTGAAGTTTCGAGA
AAGATGACATCCGTTATATTTTGGGCAAAAAAAAGATCATTGATGCTATGAAAAATAAAT
CATCTTTAAAGAAATTTGGTGGATGATTTTTATTTTATTTCACCAAGGGTACCACAAATG
TCATTTATTCGTCAAACTTTACCTGTGAGTAGAACAGTCCATCAAGTTTATTAACCAAAA
ATTATAGAATTGTTTGAATGGTTTTGCTACCTTTCATGTTGTGATGTTCATAAGTGTTAA
AAGGGACACAGAGGGATTAGTGAAATAGTTGGATTGTATTGTTTGAGCTTTGTGGGCACA
TATCTCTACTATTGAAGGGGACCTGCCGTCTGTCGTGATGGTTCGACCTCCACGACCCCC
CTCCTATCGCTAGCATTTTCACCATTCCATCATTTTTTTTTCAATCCCTCCATAAATCAA
GCGATAAACCAGCCGATTAGTTCAATAAAAAAACCCTTAGTACATCACACCTCGTACGGT
CAACAGGGGAGGCAAACAAAACGGTTTAAAACAAACCCACTAAAACCTACTAACGCACGC
ACAAAGGACCTAGCGATCCATCCCCCCATCGCTAGCAAAGACGTATCTAGACGTCCGGTA
ATCCCAAATTGCCAAAGTCCTAGATTCACCATGGAATCCGCATCGAAGATGGCGTGCTGC
CGCCCCGGCGACGATGTCCCGACGATCTCCGACGACGACGACATGAACCTTGAGGCTGTC
ACCGCAAGGACGAAAGCCGCCTTGGAAAAGTTCCTCCTCGGCCGCCTCGCCACCGAGCGG
CCCAACGTGGACATCCAGCCACCCAAGCGTGTCCGGCCGGCCTTCCTCAGTTTCGTCCCT
GCGCCGGAGTCCACGTCGTCCAACTCGGGCGCGGCGGAGTGGATCATCAAGTTGTCGGAG
ATCTCAACCGACCCATTGGACCGACCCATCAAGTTGCCGGTGCCGGTGCGGAGCTCTCTG
CCTCGGCCGCCCTCGCAGAATCACCAATCCGACTGGAAGGTCCCGCCGTGCGTCTCCGAC
TTGAAGAACCCCAAGGGGTACTCGATCCCGCTCGACAAGCGGCAGCTGGCGTCGTCCGAT
GGCCGGTGAACGCAGGGCGATAATATTGGCCGTAACTTTGCCAGGCTCGCGGAGGCGCTG
TACGTCGCGAAGATGAAGGCTAGGGAGGCCGCCCTCACACGGAAGACGATGCACCAAGAG
CTACGACGGCTCGCCAAGGAGGCGCGCGCGAGCAGAGCCGACGCTGAAGCACCTCCGGCT
GCTGACAAGAAACGTTCTGCCAAGACGGGCAGATCCAAACCCGGCAAGGGGCTCTCCGGG
GGAGCACCGAAGATCATGGCGCGTGTCAAGAGGGAGAGGCCGGTCGGGCTCGACGAGCAA
GAGAAGGGCAGCGACCCCTTCGACGTCGACCAATTTATGTCTGAGGTGAAGATGGGGAAG
GAGAACTGATCTTCCCGACGCTCAAGAAATTGATCTAATGTTTTTGTTTTTTTTTGTTTT
TTTTTGTTTTTTGCGACAGATCTAATGTTTTTGTTGTTGAAACGTTTGCCTCTCTGTTGC
TGAAATTTGGTTTCCCTCTTTCCATATACCACAATTTGACTGTTTAGGTATGGATGATTT
CGATCTGGACGAACTGCTAGGATCGAGGCTACATATCTCATAGTTTATGATCAGGATTCG
ACCCGGATTTGTTGCTGGTAATGTCAGTGATTCATCTAATTTATGCCAGATTGATATTGT
TTCAGCTTATGTTCCCATTTCATATGTGTACAAGAAACTTCTGTAGGTTCAAAGCAGTCC
TTAGTCTCAAATTGTCTTTGCTCTAACCAGGCTCCATCCTCCACACAGATATTTTACAAG
GTACTTTTCATCCTTGCCGTTAGCCCAATTATTTTGCAGGGCCAACAAAATGCAACGTAA
ACAAAAATATATTCTTGATTTTAAAAGGGTGCAGGACATGAAACTATCAAATAGTGTTAT
AGTTGTATATCTATACTATAAAGGGGATATGTCGTCTGTGGTGATGGTTCGACCTCCTTC
GATCTCCCCCTCCCAAGGCTAACGCTGGTTACCCTCTCACCCATGTTCCACCACCGATTT
TTATTCAACCCTNAAAAACCAGTCGGTTTAATTAAAAAATCTCTTTCTCCCCCTGCGACT
GGAAAATCCGCTGGCACCTCCCCCCGCACAACTAAAGATCGGGATAACCATGCCACACGC
GCATCCATGACTGAAAACCCCCACGAACACACGTCCAACTCCCAGGCCCCAACTTCCTCA
CTCTGTCGCTCCTGCCGCTCCCCTCCTCGCCGACCCTCATCTCAGAATGGCCAATCCATA
CCCCTCGCCGCCCTTCTCGTCCGCCTCATGGCCACGGTGGCCACGGTCCTTGCCGCGAAC
GGCACTTCCCCGCCCTTAATCCTCCACCAGCGACCTCATCATCTCAGCCATGCCGGGTCG
CGGCAAGTGAGGCAAGGGGTTGGGCAAGGGTGGCGCGAAGCGCCACCGCAAGGTGCTGCG
CGACAACATCTAGGGCATCACCAAGCCGGCCATCCGGCGGCTGGCGCGCAGGGGCGGCGT
GAAGCGCACCTCCAGGCTCATATACGAGGAGACCCGCGGCGTGCTCAAGATCTTCCTTGA
GAACGTCAGCCGCGACGCCGTCACCTACATCGAGCAAGCCCGCCGCAAGACCGTCACCGC
CATGGACGTCATCTATGAACTCAAGCGGCAGGGACGCACCCTATACGGATTCGGCGGCTA
GGCCACGTTCTCATCTGTTTCTATTAGTCCAGTGCCGGTGTTGGCCATTGTTAGGGGTTA
CCGGTGTCTTGTGCTGCGGAGCTTGATTTCGATGTGATGCATATGTATTCAGATGTGATG
CATATGGGTTCAGATTAAGTAATGGACTCGCTATTGCTGTTCAATATCATTTGTGTGTTC
GATCTATGAGTTCGGTTTCATTCTGCCTACCACGAATCTGTCCATAGCCAAGGCCTCGGC
GCCGCCGACTTCACGGGGGTCGTCGCCGATGACCTCGTGCTAGTTTCTCCGCGTCTCCCT
GCACCTCGGCTTGTGCACCTCCTCCCGAGTCCAGACGGCAGCCTCCTCAACGACAGCCCT
CCTGCGCTGAGGCGGTGATGGTCGACGGGTACACCATCGCCGCCATCACGAAGACGTCCC
GCAGGATGCCGCTCAGGGATGACGGCACACTCAAAGGAGACGGTGGTGTTCACGCTCTCC
CTGTATCGCTCCTCCGAGGCCGCCGAGAGGTGGCGCTCCAGAACGGTGCAGGTGGCGGAG
CCGCGGAGGGACAGGGTGTGCCCGGTAGCGGCGACGGGTCACCAAGACGATTAAGCTTGG
AGGCCCCCGTTGCATGGTCGGATGGGTCAACCTCTGGCGCGACATCCTCGTCTTCAACGT
GTTCGACGAAAATCCCGCGCTTCATGACGTGCCTGCCGCCGGTGGCCAGGGGCAACTGCG
CATCTTACGCCTACCACAAGCGCTGCTCCTCCCCCGATCCCGGACATCACCGTCAGCCCG
AGCAAAGACTACATAAGTACATTGAGATGGAAACTGACCTACAGAGAAGGCCGGAAGTGG
TGACCTCCGAGGAGGAATGCTTCCACCAGAAGCCACACCCTCAACCCAGCTCCGATGGCT
CGAGAGCCACCACATGGATCATGCCGATCCCGATTCTGTCATGGGAGGACTGGAGCCCCA
GCTGCACCATCGATGCCGATGAAACCATCGTCCATCCAATGCACCACAAGCTGCTACCTG
GGACGTCAGGAAGTATCAGTGACAATGAGCCCACTCAGGTGACGTCGCTGCCAGTCCTCG
CCACGGGTTTCCCCGC
