Contig Data
morexGenes
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Map Locations of contig_11217 (2096 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_11217

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_1400 1 931 bp MLOC_1400.1 Available Available LOC_Os01g73220.1, FRAME:+3, EVALUE:4e-87, 13101.m07991 protein peroxidase precursor, putative, expressed





CDS Structure of MLOC_1400






Contig Sequence (2096 bp)

>contig_11217 2096 assembly3_WGSMorex_rbca.fasta
TCGCCGCCCGCGACTCCGTCGTCGCCACGGGCGGGCCCGACTACTGCGTGCCCCTCGGCC
GCCGCGACAGCGCACGGTTCGCCACACGGGACGCAGTGGGCTCCGGCCTCCCGCGGCCGT
CCTCCAACGTGACAACCCTCCTCGACGTGTTCCGCAAGCTCGGCCTCGAAGCCACCGACC
TCGTCGCGCTCTCCGGCGGCCACACCATTGGGCTGGGACACTGCAACTCCTTCGAGAAGC
GGCTCTTCCCGCTCCCGGACACCACCATGAGCCCTTCCTTCGTCGCCAGGCTGAAGCGGA
CGTGCCCGACCATGGGCACCGACGCGCGCGCCGCGTTGGACGTGCGCACCACCAACGTGT
TCGACAACAAATACTTCGTCAACCTGGTGAACCAGGAGGGGCTCTTCGTGTCCGACCAGG
ATCTCTACACCAACGCCATCACCCAGCCCATCGTCGAGCACTTCGCGCGCAGCCAAGGCG
ACTTCTTCGACCAGTTCGGCGTGTCCATGGTGAAGATGGGCCAGATAAGGGTGCTCACCG
GCGACCAGGGCCAAGTCCGGCGCCACTGCGCCGTGCCCAACCCCGGCACCGTTGATGGCG
ACGACGGCCTTGAGTGGCCGTCTCTCGTGCAGACCGTCGTTGACGCTGCCGCGGAGAACC
TCGGGTTCTAGAATCTATACTAGTGGAGTGGTAGCTGTTAACCATGCATGTCGAAATAAA
TAAAAACTGAGCAGGGCAAGCCATGATCGACCAAACGGTGTAACTACATCACACGTACGG
TGACCAGTTAGTTTGATCAATCGATGGTTATGTTTCTTTGTTGGAAAAATCTAAGTAACG
ACGTCGTACCTCTTCCTTCCCCTGCGGCGGGCGCGATGCGATCCGAGCAAGCATCGTACG
CCCTGTGTTAGCATATGCTGTGCGACGGAGTCTTTTAATGTTGAATTTTTAAAAAGTTTT
ATTTTTTGAACTATAAATCCAATTGACGATCCGTTTTCATCGTTAGCTTTCTCGCAACGA
GATCTTCAAAACTAGATCCCATGTCGACATGTTTCAACAACTTTTTTTTATCGATAGTTG
CCAGATTACTATTACTTAGTTGTTAGATTATGAGACACTTAGTAGCCACATTTAATTAAC
CTAGTTGTCAACTTGGCAACTGTGTGTATAGATTTTTATCAACTACGCTTGTTTAAATCC
GACGACCGTGTTTGAAATTATTATTGTCTTGTAGCAATTTTCATTATTAATGATATAAAC
GCATGTCATAGACTTGTTTTGCCAATTTAAATATGTCAATTTGTCATATTTTACATACAA
CCTTGCCAGAAAAATATTTTGTGCGTTTGCTAGTTTACTATGTCGACTTGTTATATTTAC
TAACAATTATCAAAAAAATAGATTTCTTCTAGTCGTCGATTTTAAATATACTGAGTTGTC
ATATTTTTACACAATATCATCCTAAAAATGTCGTTTGTGCTTGCTCGTTCGATTATGTCG
AGATGTCATATATTATACATAATTTCTAAAAAATATGACGATTAAGTTAACTTTTATTAG
ACAAGTAAGTATTTACAAATATGACAAATACGTACAACAAATGTGGTAAGTACGAGAAAT
AAAAAGTTTTTGAAATATGTCGACATGGGATCTAGTTTTAAGAATTTCGTCGAAACAAAG
TCAATACGAAAACGGATCATCGATGGAATTAATGGTTTAAAAGATATTTTTTTTTGAATT
TTAATCATTTTGAAAAAATCTGGTAACATTATTACATGCATGCATGCATGACTGACGAAG
GGAGAGTGTTTGGCCGCAGCATCACATTGCTTTTTTTAAAATAACATGATTAATAAAGCA
CTAAAGCAACGCAACTTTTTATTAGGATGGTGATTAGTTCGGCCGCCGCACCGCAAGACG
CAGGTGTGGCGCCGCTGGGTAGTAACGTTCTTCTTTGTTTCTAAATAAGCCATTGGTAAA
ATCAAGTCAAAAATAAAAAATAAAATAAAATAACCATTGGTAAAATCGATAACCAATGAG
GTCCGGAGGACAGATTTCTGTTTTACAATGGTACTTTTTGTTGGGGAACGTCGCAT