Contig Data
morexGenes
Links



Map Locations of contig_112159 (3586 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_112159

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_1396 3 1011 bp AK366435 Available Available None





CDS Structure of MLOC_1396






Contig Sequence (3586 bp)

>contig_112159 3586 assembly3_WGSMorex_rbca.fasta
CGCAGTCGCGTCGGTGGTGCAGTCGGCCGTGGCGAACGAGCCGCGCATGGGCGCATCCAT
CCTCCGCCTCTTCTTCCACGACTGCTTCGTCCAGGGCTGCGACGGGTCGCTGCTCCTGGA
CGACACTGCGAGCTTTCAGGGAGAGAAGATGGCGACGCCCAACAACGGGTCGGTGCGTGG
GTTCGAGGTCATCGACGCCATCAAGGTGGCCGTCGAGAAGATCTGCCCAGGCGTCGTCTC
CTGCGCCGACGTCCTCGCCATCGCCGCCAGGGACAGCGTCGTCGCCGTACGTACTTCAAT
CCCCATGCATACGTTAACGTACTTATTATGGCATGCATGCTGAATCTGTGGGTATGTGTG
CGTGTAGCTGGGCGGGCCGAACTGGGCAGTGAAGGTTGGGCGGAGGGACTCCACGACGGC
GAGCTTCAGCGGCGCCAACAACAACATCCCGCCGCCGACGTCGGGGCTCGCCAACCTCAC
GTCACTCTTCGCGGCGCAGGGACTCTCCCAGAAGGACATGGTCGCGCTCTCCGGTGCGTA
CCTCCACCCATCGCTCAAAGCAATAAATAACTAATTATTCCCATTGCATTAACCAACTAA
TCCCCAAGTATAGTACTCCTACTTTTGGGCGATCACTGGTGCTTAAGAATGTAGACCTAA
TTCTTCGCAAGAAAGAGAGAGAACGTGTAGTACTGATGTTGTACAGTAAGTAATTAGCAA
CAAGGAAAGCGACAAGAATCGATTCCCATGTGGAAGAAAAGAAGGAACCATTTCACACTC
TGCTTCTACTAGCTTCATCACCTGTAGCCGGCATGCATGCATGCATGATCGCCAACGGAA
CCGATAGCTAAGTTTTGACTTGAAAGCCTAACGTTGTTACTTTACTGGTGACGAGTTCAA
TCATCGATGACTAGTGACTAGTAAATACTCGTGCTACCAATTAGGAGTAGCTTCCATTAC
TTTTTAGTCGGACGAAAAAAACTGGCATTGGCCTGTGATTGTCGGCATGGGTTTCTAGAA
GAACCTCATAGTTGTATTGCATTTTGCATGTCACACATCTGAGGCCAGCATTCTAGCAGC
CAGGCCACTTAAACTTTTTCAGTGAAACGGCTGGCTCTTGCTTTAGTTGAAAGATGCCTC
CCATCACATATTCACATGTCTTTGGACTAAATATTAAAAGCAAGAATAAAGTCGGCATCC
CCCAGATATACAACTTGATTACAAATTAATGACAACCACAAAAGCATATGACTCATTTTG
CTCTATTCCATGACCGGCTCAAATCCCCTTTTCTTTCTTCCATTATTTTTAGAGAATATA
CGCACTTGGCTGCAAAGTAAGTACTAATTAAATAAAAGTGCTAAAACGTTCCTTTGGAGG
AAAAAGCGCCCAAACGTTCCCTTATAAGTATTCTCAAAAAAGGAAGAAAAAAAAGTGTCC
CTCGTCTCAAATTCCGCTTTCTCTGAGGACATACATGCATGTACGTACGCAGGATCTCAC
ACCATAGGCCAAGCTCGCTGCACCAACTTCCGAGCACACGTCTACAACGAGACCAACATC
GACAGCGGCTTCGCCGGGACCCGCCGTTCCGGCTGCCCTCCCAACTCCGGCTCCGGCGAC
AACAACCTCGCACCGCTGGACCTCCAGACCCCGACCGCCTTCGAGAACAACTACTACAAG
AACCTGGTTGCCAAGAAGGGGCTCATGCACTCCGACCAGGAGCTCTTCAACGGCGGGGCC
ACCGACCCGCTGGTCCAGTACTATGTCAGCAGCCAGAGCGCCTTCTTCGCGGACTTCGTG
GAAGGCATGATCAAGATGGGAGATATCTCGCCGCTCACAGGGAACAACGGAGAGGTCAGG
AAGAACTGCAGGAAGATTAACTAAGAGAACCATTGCGGTCAAGGGTGACACAGCGTGTGG
AGTGAGAGATCCATGCTTTGTTGCAAGTTTGTGGTTCCATCTCGTTTTTTTTTTTCATTT
TTTCGTGCGTCCACAATTGTGAAATCAATATTGTACTGCAGCGATATGTCCGTTCATTGA
ATAATTCGACAATATATATATGAACCGTTTGCGTGTTGCGTAATTTCTACGTTTCACATG
TACTAGTACTCATTAGAGAACATATGTTTTTGTAAACAAAAACTTTCGATCCATTTGTCA
AACATCATGGCAACGTGTTGTTAGATCTCGGATGGAGAAACCGCTCCCGTCGCTCCCTCC
AACCGACCGGGGGCGAAAGCTTAGTCACCCAACCGCAATCGCTCCCCCTGCTACCGCCCC
ACGTCGGCCCCCGAGGCCGCAGTCGAGCAAAAGCCGAACGTCGTCGGTGAAGGGGCGGCG
GGGATCTGCTGCCTCGCGGCCCCTTGCGCAGTGCCAGGACGATGGCCACTGTTCTTGGCG
TCGATTGATCTTGCCGCTTGATCGGATATGGCACACGACGATCGCAGGGCGGGTGGAGTG
AGACGGTGGCGTTATCCCGCCCGTGGCGGCACCGTACTTCTCTGGCGATGGCGGATCGTG
ATATGGGGGGATGGATCTAGACACGTGGTGCGGCAGGTTCTCGAGGTAAGCACGAGACGG
CATTGAGACTACTCACAATAATAACATATAGAATAGTAACATACATATATTACTAGTCTC
CCTCTGCTACCGCCCCACGTCGGCCCCCGAGGCCGCAGTCGAGCAAAACCAAACATCATG
GCAACGTGTTGTTAGGTCTCGGATGGAAAACCTGGCAACCGACCTAGCGGGGACAGGCTG
GATCCGGGCGGCGTGGGGCCTACTGCCGTGATGATTTAGGTAGCAGTCATCATGCTCTTC
GTGCATCACGGCAACGGTCTGCATGATCGGTTCTCCTTGATCTAGCCATCTATGTGTTCC
GGACCGGCCGTCGGAAATCTTACCAAGGATATCTGGATCGGTTAGATTCATGGACCTTGA
TCTAGCCATCTCTTGTTCATGGACCTTCCTGTTTTTATTTTATTTTTATTTTTTTCTTTA
GCTGTGTGTGCATCCTAGATGTCTTTGTGACATCTTATAGGTGCAAATATTAGATGTAAT
TGATATTTTTGCCATATTAATACACTTCCTTTTAAAAAAATCAAACATCATGAAAATACA
AAAAATATATGAAGTAACAAACATTACATGCAAGTCTATAAACCACTTATCAATGACTAA
CAAGTACTTAAGCTAGCCGAAGGCGTGCCATCATCTTCGCCCCTTCCTCATCGAACCAAG
GCAAATCTTGTTGTTGTAAACAGTTGAAAATTGTTATGGTAAGGCCTCATAGGAACAACA
CACTGAATCAATGACCATCGCTGATGAAAAGAAATGTATATCGTAAGGATCCAATACGTG
GGCGACGAAAAATCGGCCCAGTTGCGCCCCAACTCCTCGTTTAGCATCAGTTTGGGCCAA
ATAATAGTCGGTGAACCCGAGCCGAATCCAGCCACCCGGGGGCGCCTGGGAGCGTCGGTC
GAAGCGAAAAGGCAAGTGGGCCCGCTCTGTCAGCGGTAGCCGGGACTATTCCCGCTGTTT
TCTCCCCCTTCCTCCTCCCTTTCCCTCCACACCCCCCCCCCCCCCC