Contig Data
morexGenes
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Map Locations of contig_111956 (2433 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_111956

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_1364 4 1136 bp AK248142.1 Not available Available None
MLOC_1365 1 368 bp AK374941 Not available Available None





CDS Structure of MLOC_1364






CDS Structure of MLOC_1365






Contig Sequence (2433 bp)

>contig_111956 2433 assembly3_WGSMorex_rbca.fasta
AAAGTACCTGATACAAAGCAGCGCATGTTCGTCCTCTGGTCTCTCAAGAGTTGCGATTCT
TTTGCGTTGCCCCATCGCAAATAAGCCGGATGACAATCAGTTCGATTCTGACAGGCTTGC
TAAACAACAAAAACATTAGGTGAATTTGTCTGGCCCCAGCACGAACACCAGCGGTTATCC
AATCAGCTTCGACAGGAAATAGCAGGAAGAAGCACCAGCAGAGGCAGCAAAGACTACGAG
AGCCACGCCCCGGAGTTGCCCGAATAGAGCACCAGCAACCAATGACATGAATATTGTCCC
TCGGATCATGATGGTCTGCATGAAAATGACATGAATATACAGTGTTCCCATGGCGCGACA
CAAATCTCCGGCAGGCGGGTGATGGGCGGACTCAGGGTCCAAGGTCCCGCCGTGGTGTTG
TGTTGTCATGTGAACTAGCAAACCATGTGTCATCCGCCTCACAAGGCCTGTAGGCCCAAA
TCCAATGAAGCCATTGCATGCTGTGCCTTAGTATGTAGAGGTGGCTAGGTGGCTCCTCTT
CGGTGTTCATGAGGCGCCTGCTGCGATTTCTGGTGCCTTTTCTTGAGCCTTGTCCTTGCT
CAGCAATGCTGGTGTGACTGAGACGACGCCGATCAAGAATAGCAGAGCAACTGACTGGGT
GTCGTATAGGTCGCTGAGCGATGTTAGCTCTCCCAGAGCAATCCCAGCCTGAACACATGA
AATGAACAAGGCAGTGAGATTTAAGTTGGAACAAACAATGTATACACACTAAATGCAGTA
TATTAGTAGGCATCATATGTGAACCTGTAAATTTACCCTCACGGTCACGTAGGCTGCTGG
GATGAGACCGATAAGAGTTGCCAATAAGAAGGTATGGAAGAGCACATCAACCATGGGAGA
TGCTAAGTTGATGAAGGTATTTGGCAATGTTGGGGTGACCCTTAGGAAAAGCATGTAATT
CAACAGCTTTTCTCTTCTTTTGGCAACATGGAAATGAAGACAAATCACCCAGTTCAGTTA
TGAGTTACTGCACAACCCTGAAGGATCTTATATCAAAGAGTAGAGCGATTCAAGATATTT
TTAAGTATCCCGGCAGAAATTTAAGAAGTTATTACTCTACATAGTGTTGAAATAAAACCC
GCATCCACTAATATTGGTGCTGAACTTATTACGTGCTTCTGGTAAAACGTGAGTTTGTCT
GGCCACAGCATGAACACCAGCGGTTTTCCAATCAGTTTCGACAGGAAATAGCATGAAGAA
GCACCAGCGGAGGCAGCAAAGACAACCAGAGCCACGCCCCGGAGTTGCCCGAATAGAGCT
CCAACAAGCAATGACATAAATATTGTTCCTGGGATCATGAAGGTCTGCATGAAAATGTAG
ACATCACAGTAACCTATCAACACCTGTACGGTGTAGTCACTGGTATAGTTCTCAAGATGG
CCACTGCAAGGAAACAGTTTGATGGTTAGAAATTGAGGGGAAAACTTTCCATCATCAGCA
TGTAGCACAAGCAATTGGACACTCCAAGTGCACATGTATTTCAGCTTAAGCAAATAATCA
CCATAATAATGGAATCATAACGCGATGATGTGCATTGCATAACTGTAAAGCGTGCAGATA
GCTCACACGTCTACAACAGATACATGTTACGTGTGGTGATTATCAATAATATAGAGAAGG
CACATGTAACATGCCAGGACCAGGTCCAATGGATATCTCGTGAATAGCTGGCAAAGCGGC
AAGAAAGCGACATGGTAATTTGAGAAAAATAAAGTAGTACAACAATGTGTCAAATTTCTT
TTATTATTATAGCTTAGTCTAGGGAAGCATGCTAAATTGGTACAACAATCCCGTTAAGAG
TAACAATTGGAAATGTAGGCTTAAACTTCAGCTCTACCCTGTTAGGCTAACAAGATGGTG
ATGTGTGATACACATTACTGTTCCAGGGTCATGTGTTCCCAAATTTGACGAGCAGTTTGA
AATAAATTACTGCCAAACATGAAGATGGAGTATGAATTGAGTGATTTATTTATTTTTACA
ACCAGATCCATGTTCCCCTTCTGGCATAGACACAAACAGCTCTACCAAACCAAGGGTGAG
GTCGTTCCCAAATCAAGAGACAACCATCACTAATTCGTTGAGAACTAGCATCAACCAACT
GTTCCATTCATAAGGCTTGGATCCGTGAGGAGCAGGTGATTTCCGCATTGAAAACCTACC
CCCAAAATCTTTGCGTAGAACGCAATGGCACGATGAATCTGTGAATCTACTGGCTGGTAG
ATCCAGTTAAACCGACGCGCTCTAGGCAAATAATAAACGGAACGCAAAATCGAATCGCCT
CTATTCCACTTCCAATTTGAACATAAAGGAGGAAGATGAGCATGCGTGCACGCCCGCCGG
GAAAACAACACGAATGGGGAAACTTGCGGCATG