Contig Data
morexGenes
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Map Locations of contig_111736 (4708 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_111736

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_1337 1 3344 bp MLOC_1337.1 Available Available LOC_Os09g09470.2, FRAME:-3, EVALUE:0.0, 13109.m00814 protein WD domain, G-beta repeat domain containing protein, expressed





CDS Structure of MLOC_1337






Contig Sequence (4708 bp)

>contig_111736 4708 assembly3_WGSMorex_rbca.fasta
ATTAAAAACTGTAGATGTTCTATTTTCTAATGATATAATTTTTATGTTAAATAATATATT
TTATATAAGTCAAATTAACGATCTAGGTACACGTGCATGCCTTCTAAACTGTAACGGAGG
GAGTACAACTTTGTAGTAAAGTTGTACAAAAGCAGCGACAATTAATATGAATCTGAGGGA
GTAATAAATTTTCCATCTCATGGGCTCGGTAGTAACAATTGTGTCAGAAGGAACATAAGG
ACCAAATAATAGCAAGATGCATTAAATGGAAGGCAACTGGTAGAACGATAAACACAAGCG
AGCTTATTACTCACATAGTGGACTCTTGCCACCAGCAGGCCAAGTTTCCAAATACACGAA
AACGTTCGGTTTGCCTAGGTCAAGAGAAGGATGCATGCATTTCATACCAGTAACTCTAGA
GTATACTATGTCGAAAATCCTGTTTTGGCTAACTATACATAGGTCATTTTGAGATAATAC
CAAGAGCTGCATGTGTTTGCCAAGTTGTCATGTTGAACGCTGATGTTTTTGAATTGCCTT
TACCAACAGGTGATAATGGTGATACATGGGCTGATACAGCTAGAACCATTAGCAAGGACA
GCAGTGTAAGCCACACAATAAAAAACAACGATAATTTCTGGCAAGTAAACAATAACAAAA
GAAATATAGGTGCTTGCAATTGACAACAAGAAAGAACAAGGCCACAAAGCAATGACACAA
AACAGAACCTACAGTTTTCTTACCTCCTGCATGTGAAACTGTCTTAGAAGTTCAATGTGG
AGATTTCTCACATCCTCATGTATAGACTTGTGAACAGATCCTAGAGATTCCTCGAGCATG
CGCTGAACATACTGAAGGGAGAACGAAGAAGCTCCCTGTTGATCAGCTGACGAACCTGAG
GTTGGCAATTGAGGTGGCACTACCCCCTAATAAAATTGCACATAGACACTCCATTAGTAA
ATAGTGGTGTTTACATTTTGAAGTAAAAAAGTTAACAAATTACTCCCTCTGTCCCATAAT
ATAAGAGCGTTTTTGACATTGACACTACACTAATGTCAAAAACGCTCTTATATTATGGGA
CGGAGGGAGTAATTCTTACATTGCTTGCTAGAAGGCTTCCGGACGAAGAGGTCATTGGTG
CCTCCTGTCTTGATAATAGACTAGTAAGCAGTTCATCTTTTGTTTCTGCTCCAGTCTTCT
TTGATTTTGGCGAACCAAATGCTGAAGCTAATCCTTCACTAAAAACAGAGGATGTGCTCA
ATCTATCAGTCAAAGTTGAGGGTTTCCATGCGGATTTGGAAGGTGCTGCTCCTGGCAAAT
CAGAATTCGCCAATGGCACGGTCTTGGACATAAAGGATGAGGAAACTGAAGCCTGTAGGC
TAGCAGATGATGTCTCTAGGGAAGACTGTGCATTGCTCAAGATGCCCTTGTTTTGTAAGT
TCATTAAAATGTTACTTGTCAGAGAACCTTTCAATGAGAGACTGGCGGATGAAGCTGAAT
CCTGTAAACCTGCAAACGCCAAACTGCCAGTCTGAAAGGCTGATTGCCCAAAGCGTGAGA
CTTGTTGACGATGTGTTAGCCTGTCGGGCAATGCATTCCCAGTTGATGATTCTGGTGGAG
AGATAGATGGTTCACTCTTCCATGATGGCACGGCTGTAGCACTTGCAGATGAGGCACCAT
CCTGCAGAACAATGTTAAGAAGGCTCAATTGGCATCCTGCGATGACAGAGATAGTGAAAA
CAATAATAGGTTTTCGAGAAGAAAGAAACCTGTCTTGAAACAGAATTAGACCTCCAGTCC
GTGATTGGATGTGGCTCACTGTTCCCTTCCATATACTGGAACTTCCTAGTTGCTAATAAC
TTCTTATCTCCAGATTTATCATCCTTTTTTGTTTCATCACTCCCGTGCTCATCCCACCAG
CTGTTGCTGGATGGTGTGAAAGGCTGGACATCAACAAGTGGAGAAAATACATCCATATCA
TCCTTTATACTGAAGTTGCCACGAGGAGCCTGTAGCTTTGATAATGGTCCACCAGACAAT
GGACGGGCCCTATATGGAGTTTCCTCCGCAGTAGTAGATTTTGAAGTGGAAAGAAATCCA
CTTGTGTTCCCTGACAAAGAAGAGCGAAGACTCGTAATGCCTGCTCCAGATGGAAATGTT
GAAGGTGTTGCTGAAGGCAAAGGATCTGGCATAAGAATAGAATCTTCACTAGTTCCCCCC
AGAAGGGCAACTTCTGAAGAACTGTTCTCGCTAACAATGACAGGCTTTGACCGTTGCCAG
CATAAACTTGTCACAGCCTGGCAAGCAATGTAAATTCGGAAATGTTAAACAACTCAAGAG
AGCAGATATAATGGAACTTGTTAAACAGTTGTACATCAACGTCCATGACAGTCTTTTAAT
CTTGTTTAACTAGGAACTTATCAAATTTCACAAACAGAGACTCTGCAAAGTGCACAAATT
TCTGTGCAAGCATAACAACATTACAAAATATATGAAAGTCACTAATACTATTCCCAACAC
TGAGCGCAAAAGAAAAAAAATAGCAAATTGATTTGCGCAACATGTTTTACAGATTTACAT
ACAATATGAGAATTAGAAATAACATTTAAGCATGGACTAAGAAGTAGAAATACTAACTTG
TTAATATTAAGTTTATTAAATTTGACCAGCAACATTGTTCATCAATACAGTTCCATCTCC
ATGCAGGTTTCTATTTTCAAAAGGAATGAACAATTTGTTCTCGTATTATGGTGCAGTATA
TGATATAACCAGAGGTAGCACTTCTGTTGATCATCTACGCTTAACTGAGAAAATATTGAA
CAGTGGTAGTTGGCATACTTTTATACAAGTGGAAATGTTGCACTAATATGTGCATATATA
CGTATTACTATACAAACCACCAGAGAACAGCATTATTTCTATGTCAACAATAAATCGCAG
GGCACCAGTGAGGGAAAAGAGAAATGTAAAGTTCACCACCTCTGAGCTATTGTACGCACG
AAGAATTGTCAATGGCTGAGGTTTGCCCCGAACATCATAGAATACCACACGCCCACTATT
TGTGCCAGCTGCCAATATTGTGCCATCATCATTATATGCCAATGATGAGAAAGGGGCATC
ATGAGGAATGGTGTGTGTCGCTCTTCTTGATGCAGAATCGAGTGTGTATAGCTTCTTATC
AAGGCCAACTGTAGCAATTATCTAAAAGAACCAAATACGATAGAGATTATTTATGGCCAG
TAAAAAATCAAACATTGAACACCAAGCATAATACTAAAATAAACCTTGTCACTGGAGGGT
GAGATACAAACACCACTTGTGGGTGCAGAGTGTTGCTTCAGCCATGAGATCTGCACAAGG
CATTAGTCAATTCGAGAGTAGCATTGAAGAAAGCACAGCTACACCATGATAAATCTGGGT
TAACACAACAAGTCATAGACAGCAAGGACAGTTCACATAACTGATCTCAACCTTTTACAC
TAATCAGTGATCCAGCAATTGTATGAATCGTAGAGCATCTCTAGCAGATGCCCTAAACTT
AATCCCTCAAACCTTCTCCCTATAGTCAAAAAAATTAAGGGATTGAACTTCTCAGCTAGC
AGATGTCCTAAACTTTATCCCCTAAGAAAGCAGATATTTGGATCAAACATTTCATCAACC
ACCTTCAATACACACTCACACAGTCCAAGTATTTGCACAATGACACATGGGGTTCCAACT
ATCTAAAACTGTCGTAGGCCTAACATCGATCTGCATTGGATAGGAACAATAAAAACAGTA
GCACATTAAATTGTTCAAAAGTGTCTAAATATTTCCCCAACAGTAGTACATAGCAGCAGC
ACAAAACCAATCAATTACTTCTTCTCCTCTCAATCTTCAGAACTCGTTGCCCCTCTGCTC
TCCTCTCAATCAACGAACACAACAGCTAGCTAGCCAGCGGTACAAATTAATCAGTCGCTA
GCTAGCTGAAGGACGCTGGCCTGAAGGAGGTGAGCAGGCAGGTGTTGATCCAAGCCTGCT
CGTACACCACCGTTGCTAGCTAACCGCAGGCCGCTGAACCGCAGCCTGCCATCGCCCACC
AGACCAACGTGCCACGCCACTGGCCAAGCTCCTAGATGCGCGCATCCTCCACGTCCGGGA
TGGGAAACCACCCGTCAGGCATCCAGACGGTAGTCAGCCGGAGCCAGGGAGATTTCCGGA
GCATGACGAACAGCAGCGGTGATGCCTTTGGTGTGGCCGGACTCGAGGTCGAACTGGAGG
ACACGCGCTGCCAGACAGGCCACGAAGAGGATGGGCAAGAGGAGCGTGGAGGGGGGCAGC
TATCTGGGGGCAGAGAATCAGGCTCACGCGGTCAACGGGAGCCGGGAAGATACCCAGAGC
GTGACAGACAGCGGCAGACTGCAGCCTGGGAGGGGGGTGTGATGCAAGCACGACGTGTGT
GGGAGCTCTACCGAGCTCCGGTGTCCATGGCGGAGGAGTGGGAGCAGAGGAGGTCACGAA
TTTGGCGCTGCCGGTAGGATCCCGGCGCCAATGAGGGTAGCCAGAGATGCGGGGGCAGTG
GGGGTTCCATTTTAACGGTCACCGGGCGGTGGACGGCCCACAGCGTGGATTCCAGCGGCA
AACGGGAGCGGAGCGCCTCCTTATTTTTACTGAGAACGGCCGCGGCTGGACTAAATTTGA
GTGTGGCAGGTTGTTTTTTGGGGCGCGG