Contig Data
morexGenes
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Map Locations of contig_109047 (3485 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_109047

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_1079 1 958 bp AK250875.1 Available Available None
MLOC_1080 1 482 bp None Available Available None





CDS Structure of MLOC_1079






CDS Structure of MLOC_1080






Contig Sequence (3485 bp)

>contig_109047 3485 assembly3_WGSMorex_rbca.fasta
GTCACATTCTTGTGGGATGCCAAGTCACCGTCAATTCATGATAGGAAATATTTTTCTTTT
CATGAAACTTTCCTTATTTTTAAAAATTCATAAACAACATTACCGGCTTTTGAAAATGCT
TTGCTCAACATTGAGAATTTAAAACATTAGAATTTCAATTTTCTACAGTTTATTTTATTT
TTAAATTTTGAACTTCTAAAGTTTTGGACTTCAGAAATTTTAGGCGTGTAAACATGTGAT
ATATCTTATTTATTTTCAGAAAAATATGCATTGAGAGAATATCTAGAAAGAAACTTATTG
AGCATATTCCCATGGACATGCGTAAACGCGCGATATATCTTGGTTATTCTCTTTTTACAG
ATCTTACATCTAGGGGCCATATATTTAGCATGCACATTTCTTTAAATATTAGTATGAGAA
GGATCGCTCTAGGTTAGCATTTTTCAATTTAATATAGATTTTACACTACTATGAATCATT
AGTACTTCACCACATACATATATAATCTTTCATTTGAATATGTATCTGTTTCTATATTTA
AAATATTATTATCCACTATGTATCTGAGATGTATATGTCTTAGAAAATTAGGGAAAATGC
GCTTTTAAATTATGTCAATGCTAGCCAACGTGAGTTCGTAGCCAAGATTGATATGTGATG
CATGCACATCTGTATTTCTTTTACGCATTTATTTGATACATAGAGATTTCTTTTTGGAAA
AGATAACACAACAGTTTACATACTTATGTTAACCACATCAACCATACGTTGCATATATTA
TAGAAAGGAGGGTAATACTAATAGGCACCTCATGCATGCGTACATCTCCTTTTTTCTGGG
ATGTGAAGTGACATTGGTATAATGGACAAGTTTAGACAAGAATGAGTCTTTTGACCCATA
ATGCTAGACAAATGTTGATTGAACTCAAAACTAACATGACTTCATGCTTCACGAAATCTT
AGTCACACAATTGATGTCACAAGGTTATTTTTATTACTAATTTTGGTGTTGTGGCGCACC
ATAGGGACGTTATCGAAAAGTTCACCAGCCAAACCAGAGATGTAGGGAAGGAATTGTTGC
GCCTCTTGTGTGAGGGTATGGGGATCCGGGCTGACTACTTTGAGGGAGACCTTAGCGGGG
GTAATGTGATCCTCAACATCAACCACTATCCATCTTGCCCGAATCCAGACAAAGCGCTTG
GACAGCCGCCACATTGTGACCGAAATGTCATCACCCTCCTACTCCCTGGCGCTGTCAATG
GCCTCGAGGTCTCCTACAAGGGGGACTGGATCAAGGTTGACCCTGCACCTAACGCATTTG
TCGTCAACTTCGGCCAACAACTCGAGGTAATTGATTGTTTGAGCATTGTTTGCTCAGGTA
AACATCACCAAGCTGATTGATTGGCTATTCATGTGGACGCAGGTTGTGACAAATGGGTTG
TTAAGGAGCATAGAGCATCGTGCGATGACAAACTCGGTGCTTGCACGCACATCGGTGGCT
ACCTTTATTATGCCTACTCAAGAATGTATTATTGGTCCCGCGAAGGAGTTCCTTAGTGAA
GAAAACCCACCGTGCTACCGCACCATCATGTTTCGTGACTTCATGCGCATCTACAATGTT
GTCAAGCTTGGGTCATCGCTCAATCTCACAACCAATCTCAAGAACGTTCAGAAGGAGATA
TAAATCAAATCTACAAGGCTCCTTCAAGATCTGGAATTATCCTATTCCCACTTGTTATGT
TTCTTACGTATGCCACAGATCTCAGTTGTGTCCAATTGTTGCTATGCAACAACTACATGC
ACTTTGATGATTTGTAGCAACAAAAGTAATAAATGCCTGATGAGTATAAGACGTTAATCG
TCTTAATGCTCATTTGTTGTGTTTTGTTTGTAAATTATCTTTTTTAACACAGTATAGACG
CAAATGTTCATATATATACGCGCATACACTTACCCCTATAAATGCATTCACACGTTCCCC
TATGATCATCTTTAAAAGATTGAGCCGGCATATCATCTTAAGATTTATGAAGTCATCATA
GTCGTTTCGTCGTCGACGAAAACGTCTCCTCCCACTGAATGCGCATCGCCGGAAATCGTA
AAATAAATTCAGAAATACTGCAAGCATCATGATTCAAATCCTGATGGACTGTGGATACCA
CTGTCACTCTAAGCATCAAACCACATGTTGGTTTTCTATTTGTAAATTATCTTATTTTAC
AAGAAACTGGGCACCTTCTCGTTCGTGCGTGCTTGCTACTACTAAAGACAACTTAATATC
TTATGTTCTTATCTTATACTTTCTCTGTATCTAAATACTTGTAGTTATAGAAAACTAGTC
TAGTTCTTCCCAACTATAAATATATATTTACTAATTGAACACATCTCTTAGACCTTTTCA
TTAATTCACATCATCAAAATTACTTATACCGTTGGATTGTAAAATTTAAACGTAAAGATA
AAAGAAAACTTGTGTAGCACCCATCCCAAAGAAAATGTATCGGACACATCCAACGTTAGT
GAAACAAAATAAAGAAAGAGCTAAAAAAGCAAGAAAGTATAGATCCGTTCCGTCCTTAAA
AACTCCGATGATGATCCACAAAATTACAAGATCCCATGATCAAAAGCGCTCCGTGGCCTA
CTAGCGTGGCCATGCTGACTCTAGCGATTGTGTGATCTCCTGGTTACCGGGGCCTCGGAA
GGCTCCCGGTTATCTACTCCCGTGGGTTGCTTCGCGGAATACCCTCGATTGAGCTATGTG
GTCGTCATCGTCGTCTTCGTTTCACGTTCTCCATGCATGATGATGAGGTGTGTGTGGGCG
GTGGTAGAGCCCATGTCCTCGTCGGTACACGTGACGCAAGTAGTGTGGCCTTTGCGATGG
CTGCGCCCGCCCTCGTCGTCGAGCCTCATCTGTCTTGGCAGCGAGCGTTGGGGTAGTCAT
TGTTGGGATAGCATGGATCGTGCTCAGGTTGGACTTCTTGACGACTAGCAGCTTCATTGG
GGTATGCAAGGAGCTAGGCCTCGTGGGAGTAATTGTTGGTGGAGTTTGGCGTCCTTGTAA
GACCATCGCGTTGCTTGCATCGACATGGTCGATGTGGTCGACGCCTCGTCTCGACCGAAC
GCCGAGTTTGTGGCAGTCGGCGTAGTCAAGGGGTCGTCTCACGGGCTCGTAGAGGAGCGG
TGTTGTTGTTGAAGTCGTTGTTGAAGTCATGTCGTGTCGCCTCGCCGTCGCGCCTTACCT
TCGTGTGGCGTCGCCTTGCTCAGCTCTGACCTCCAATGAGCGTGACATGGGTGGCATCAT
GACGGGACGTCATCCTTCTTGATCGGGGCACGGGCATATTGCTGGGATGGCGTCATTTTC
ATGGATCTACGCCAAGCGGGCGCGGTGCACGGATGTATGCACTAGTAGAAAACGGGGCTA
TAGCCCAGTTCATTTGGGCCATTTGCCCCGGTTCAAGAACCGGGACTAACAAAGCGGGAC
TAATG