morexGenes - Barley RNA-seq Database

Contig contig_1089743

Source Contig contig_1089743

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

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Map Locations of contig_1089743 (262 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location	No map location

Predicted Genes from contig_1089743

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_1071	1	181 bp	MLOC_1071.1	Available	Available	LOC_Os05g05280.1, FRAME:+1, EVALUE:2e-39, 13105.m00547 protein zinc finger family protein, putative, expressed

CDS Structure of MLOC_1071

Contig Sequence (262 bp)

>contig_1089743 262 assembly3_WGSMorex_rbca.fasta
CTGAAAGCGGTGCCGACGGACTGCAGCGAGTGCCCGATCTGCCTGGAAGAGTTCAAGGTG
GGGAACGAGGTGCGTGGCCTCCCGTGCGCGCACAACTTCCACGTGGAGTGCATCGACCAG
TGGTTGCGGCTGAACGTAAAGTGCCCACGGTGCCGCTGCTCAGTGTTCCCCAACCTGGAC
CTGAGCACGCTCAACGGCATCCGCTCCAGCAGCGAGATGCTGTAGCAGGACCGCCCCTCG
GGAGCATCAGCTCTTACAACTG