Contig Data
morexGenes
Links



Map Locations of contig_108892 (5223 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_108892

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_1064 1 1040 bp AK374714 Available Available None





CDS Structure of MLOC_1064






Contig Sequence (5223 bp)

>contig_108892 5223 assembly3_WGSMorex_rbca.fasta
AGTTTGTCAACGCAGAGGACCGCGTTCTTGCTGTCGGTGTGGACGTTGATGACGCTCATC
GGCCCTGGCATCTTCAGTGTATTGTAGGTGTGGTGAGACTGCGCCATGAATTTTATGAGG
GGTGCGGCGGAGGTCCCGTCGTCGCCGCTGTTGCTGCTGCAGTAGTCGCCGTCGCGACGT
TATCCTCAGTCGCCGCTAGCGCGTCTCGCGTCACCATGATGACGGGGTTCGGGCCGCGGC
TCGCGGAACTCCGTGCGGTGTTGTGGCTGCGTCGCCTGTAGCTGACTGTGATGGCAGCTT
GGATGAAGACGGGATGGCCGCCGACGTGCCCTTTGCCTTTTTGGGAGCCATGGGCGTCGA
TGAAGATGCTGAGGAAGACACGCAAAAGTTGGTGAAGGTTCGCGCACGCGGCCTCCTACC
TGGCGCGCCAAAGATGTCGGGGTACGATAACCTATGAGACCTGCTGAAAGCACAACTTCT
TCCTAGGTGGATTTGGTAATTAATAACAACATATATTTCATTGAACTAATGATTCTACCA
AGTATATTTCAGGAAAGGTTCAATGAATGGATTGACAAAGGATTGTGAGGAGATCCCCTA
GATGCAAGGAACATTAGTTAGCAACAAGCTTCAAGACTCTACATTTTGCTTTTATGTGAG
AAATCACAATTGAGTCCAAAGGAAAGCCAATACTATTAAAAGGGGATGAAGTATCTATGA
TGATCTGGTTGCTCAAGTGCTTAGAGTTAGCCATCAAAAATCCTCATAGAATTCTCCCAC
ATAAACATTCTGTCCAAGCCCCAAAGTCCAAATTCGGTGCCACCAAGTTTCCAATATCGG
CCTGATGAGGTGGAGCGATGAAGAGGTAGCAGGGTTCTTGCCGGGCACGGCGGCTTGCCG
GTGGCTTGGCCTTGATGCCTGGCGTTGTGTTCGACGCATCGTCTCTTGACAAGGCTTGCC
GGGCAGGAGGCCGCTGTCGTCTGTGCACAAGTCAGGGTACTAAGGGACTCGTTCTTTAGT
ACACCGACACGTTGAGAACTAAGTCCCCAACTACCAGCTTGACCAGGATAATCCGGTTCC
CACGTCTCTTGATGTCTAAACTTCATACTTGAGGCTCTTGCTAATCAAGATGCCTACTCC
GTTTCTGTTTGCAAACGTCCCCGTGTACCACAGCTTGAAGCCGCTATCCTCCATCTCCTT
TGTCTTTTGTCTCCTCTATTTGGTCTCTTGGACGCAAAGGATATCAACATCTCCTGACCG
CTGAATCAACTACCTCCCGAAGCTTACCTGTCAGAGACCCTACGTTCCAGCTACCTAAGT
GAATCCTCCAAAGCTCGACTAGCTTCCTTACCCTTCGCACTCGTTGAGTCAAATGCAAAG
ACCCTTGCTCATTTTCCAGCACACCCGGGCGCTGATGTAGCACGTCACTAAGGATGCGAC
GACCCGATCCTAGCTCACTTGCCACCATATCTAGATCACGATACGGCGCGCCACTTGGGG
GGTGACGGCCCGGCCCTTGCCCATTTGACACCACACCCGGGTTCAGATGTGGCGCGTCGC
TGAGAGGGTTACACCCCAACAAAAATCTTTGGGGTTTCATCTCCATAAGAGTGGCTGAGT
TTTGATGTTGGCTCGCCAAGCCTATCACAACCCTCCTCCTTTACCCGGGTTTGGGACTGG
CTATGTGGAGACAACATAGGCGGAGTTACAGGCTAGGCGTAATAGAAAACAATGTCCTGG
AATTCATGGCTAGACTTACGAAACGAACAAGGTATGATTCTTAATGTGTATGAGGCTAGC
ATCTGAAAATATGCCTAAAATGTTGATGAATCATATTAGGCAGTACAAAGATACTAGAGA
TTGAGGGTCACTCACAAGTGTACTCACTTGTGTGTAGCTACTAAGTGCATCTAAAGAAGA
CCTTGAGTGGATAGGTGGTATGAGCAACTCTTGTCGTTATTGTTTGTAGTAAATTGCTTT
TTTTTAATGTTTTATCTATGTATAGGTGGATTAATTACAAGTCATTTTACTCGCGTCACA
CAGGTTTTACTCGAGTTGGCACGCAGCCGGAACAAGATCCCGTTGCCCAAGTCTATTGCT
CCACCTGGCTCGATTCCTTTGCCACCCGAGCAGGACACTTTGTTGAGTGAAAACTACCAG
CTCCTACCCGCACTGAAGCCGCCAACTCAGACTGAAGAAGCAGAGGATGACAATGAGGGA
GCCGACGCAATCCCTGCCAATCCTAGTCCAAGCTATTCGCAGGATCAGAGGGGCAGTGAG
CAACATCAGCCTCAGAGCCAGAGCCAGAGGGTTTCTTTCCAACTGAACGCGGTGGCTGCC
GCGGCTGCAAAGCGCCCTCTGGTGACAACTGACCAGTTGAACATGGGCTAACTGATTGTA
GATCGCTGGCAGGTTCCTGGTGCTTGCTCCCGCAAGCCTACTTGCTGATGCTTGTGTAGC
TTCTGGGATCGCCCTTTCTGGCTTCCGCCCTCCTATGTCACCATGAAAAATTGCTGATTG
TTGAGGAAAGGGAGCAGCCGTGCAAGTAGTGTACTAGTATGCTGTAGCCGTGTACCTTGG
GTTAATTAATTCATTCCTGTCCGTTATTTTAACTTATTGATCTTGTAGATCTCGTCAAAT
TTGAACTATCCCGTTGCTGTTTCTGAATGCTTAATTGGTGTTCGGATTATGCTTTTGGTG
GCGTGTAGCACATATTTGGTTGGTTAAAATGAGGACCTAAAAATACCTGCACATCTTATA
AAGCTAGATAGAGGGAGTACCAAGTGTACAATATATGGAGATAAAGATAAATCTGTAGTG
CTTTATCATTAGTGCAGTGTTTGCTTTTTTGCTTGAGGAGTAGAATGGACTGATACCTTC
TGTGCGTGGAGCATGTATCAGTTACTGAGAAATCAAAGTAAAAACATCAGCAGCCCGTCT
AGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGT
GGGCGACTTGTTTTTTTATCTTATCTTTTGTGCTCTCCAGGAAGCAGTTTGCATTGCAAG
TTCATGAATGATCCATGCAAGGCTCTTAACATAGTGCTCTCTATGAAACAAAAACAGCCC
TTCTAGCTCAGTTCGTAGCATTCATGTTGCAATAAAGTGAAAAAAATCCGCAGCATCGTC
TATGTTGTAATTCTTTTTGCAACATAAGATTTGTTGCAAAGAATTCTGCAACACCACCCA
TTTTGTAATGACGAGGACGGTGTTGTATGTTGTTAGTTTTAGATCTAATGGATACTGAGC
CCACGGATCCAAAAAATCCGCTGGCCGATGCGTAGCCTATATTTAAAGCTTGTAATTCTT
TTGGTCAGGTTGTGTTCGAGTAGTTCCTTGATCTCATTGTCCCCGATCAGCTAATTAGCT
ACCACCTGCTGCCGCCACGTCATTGTATATGATACTGCGGTGTGGTTGAGGATCTGTTGG
GAGAGGACAGCTCGAGCGTGCATGTCAGCATGTGCGACCTCTGACGACGTCGGGCGGCGA
CCATGACGACGCCTGGAGGCAGAGAGGGAAGGGGGAAACGGCTGCGAGGGTTGGGTGGCG
TCTTGGGGAGGCGAGATGGCAAGGTGGCCATGACCGGGGAGAACGGGGTGCTCCTGGAAA
GAGAAAGCAGGATCCAACGTGCTGGCTGTCATGCCACTTGCGCAGTCGCCACCGGTTTGG
CATGCCAAATGCACTCTGAGGGTTTCAGACATCTTCTGGATTCCAAATTCGGCCAAAGTA
TGTCTCACTGATAGCATAAACGAGAGACAAGAGAGATGGGCCCAGGGGAGAACAACACTA
ACTCTTACTGTATGAGATTGCCATGGAAAAGAAAGGAAAAAAAAATGTACCTTCCTAGAT
TTTTTTTTTTTGCGGAAATAATTCTTGCATTACTCGAAGTTCAGTCTACATCTCGTTCAA
CAATCTCCAGGACCTCTTCCGGACCAGAGCCTAACCAAACAGCAGTTCGGCAATGCAACC
TACCAAAATTAGCCATGAAGTGATTAGCACTATTACAGTTCCGACGAGAATGAGTAATAC
AAGAATCTCTCTCTCCCATACTATCAATGATCTCTCTCGCTATGGAAGCATATTTTGATT
TGTTTCCAGCTCCTTCTCTTATCATGGTGATGGCCTCTAAACAATCTGTTTCGATGTCAC
CTTCCTAGAATTTCAATACCGCTCAATTGCATTGTGAGACATCTAAGTGCAATTTCAGCA
GATATTTGCCTTCATCATCTCTCACAAATCCGATTAAGCTTGAGTCTGAATTTTACAGAC
ATGACACAAATTGATGACGGATACAGACTAGCAGCAGCAACGCGTCAATTTGTCATGTCA
TGCCTTGGTGAGTGATACAACCAGCATGAATCTCAAGTTTCTCGCGTGCATGACTTGTGA
GATGTGACCTGCACACCGGGCTCAAGTGCTTCTCGCCGGTCCTCACGAATTCATCCATGA
TCTCTCCGGATGATCCAAAACGCTGGGCGATTGTCAGCTCGAAAGCAGCTCTAAGACTAT
TCACCATCTTGCTTGGGGTCAGGAGCGCCCTGTCCATGCCGCTTATAGGGTCGTGCACCC
GCATCTATGTGACTGAGAAGGAGCCCTTTTCTGGGATGATCTCTCTCAGCTCTTCATCGG
AAGGTGCGTGCACCGGTATGTACAAAAAATCAAGCCTTTCTTTGTCAATCACACCCTGGT
AGTTATCTAAAAATGCTCACTAGCAAATGACAACATGGTTAAAATGTAAAGCTTGTATTT
ACCTCTGAGGCCATGGCGCCTAAAATATGAGCTGCAGTTCCACAGATGAAAGAGCTCTCG
GTGACAAGCTCATCAGAACGCCTGTTAGATAAAACGAGATAAACAAGACACGAGAGACAC
AATTTTTACGTGGAAACCCTTGCGGAAAGAAAACCACGGATGCAGGAAGGCGCAATCACT
ATGAGGATAGAATATTACAAGCACGAGACGACATACCGTCTTTAGGTGCGACTACATGGA
GTACATATGGGGGCAATACATGAGAGTACTTGAAGGACAAGTAAACGAGTTGTAATCGTA
CGCGTCGGTACCAACGCAAAGGCCCACACCGTTTGTACTATGTCTAGTTCAGTACGGTAG
AATTTGGATCACAGTTTAACAATCTTCACCTTGAGCCAAATTCCCTCCAGTAGTCGAAGA
AAG