Map Locations of contig_108515 (8160 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_108515

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_1013 1 867 bp AK372017 Available Available None





CDS Structure of MLOC_1013






Contig Sequence (8160 bp)

>contig_108515 8160 assembly3_WGSMorex_rbca.fasta
CGGCATCGGGCTGTCACAATGTAGCAACAAAGTCTTCCACTGATTTTTTAAGCCCAGGCT
AGTAGAAAATAGACTTCACGCTCTCGTAAGTTGCCCTGTTTCCAGAGTGTCCTCCTACTG
GGGAGCTATATAATGCTGTCAACAATTTGCTTCTTAATGTTGATATATTCCCAACCAGTA
TTTTCCCTTTGTACCTGATAATACCTGAATGGAGTGAATAGTCACCATCCTTGTTATCAG
GTTGTAAGAGGAGCTTTTCCAACAACTTTTTAATGTTTGCATCTTGTTGATAGCTATCCA
ACAACTCTTCAGCCCACAGTGGAGTAGTTGTAGATATGGCCATACATCCAGGAAGCACTC
TAGAGAGGGCATTAGCCACTTTGTTGTAAACACCCTTCTTATACTGGATAGTAAAATTGA
ATTCTAGCAGCTTCATCAGCAGTTTGTGTTGGATTCCTTCAGTCAACTTTTGATCATTAA
TAAATTTTAGAGACTGGTGATCAGTTTTGATAGTAAGATCATTTCCTAATAGATAATGTC
TCCATCTTTTCAAAGCTTCCAAAATAGCTAAGGCTTCTTTTTCATAAGTTGATAGTGCGG
CATTTCTAGGACATAATGCAGAACTGTAATAAGATATGGGTCTCCTTTGTTGCATCAAAA
CAGCTCTAATACCTTTTCCAGAAGCATCAGTCTCTAATACAAAAGGCTAAGAGAAATCAG
GTAGTGCCAACACTGGAGCAGATATCAATGCTTTCTGTAATTGTGTGAATGTTGCATCTT
GTGCTGACTACCAAGAGAAGTTGCCCTTTTTAAATACATCATGTAGGGGTCTACAGATTA
ATCCATACCCTTTGATGAACCTCCTGTAATAACCAGCTAAACCCAAGAAGCTTCTGAGCT
TTGTGACAGTATCAGGCACAGGCCACTCAGCAATAGCAGATATTTTTTTGGATCAGTGGC
TACTCCCTCAGCAGATATGATGTGGCCCAAATATTCCACTTGTTGAGCAGCAAAGACACA
CTTAGATAGTTTGGCAAACAGGCTGTGTGCCTTTAGTGTATCCAATACAATTTTTATATG
TTCTAAGTGTTCCTTGAGATTTTTGCTGAATATCAAGATATCATCAAAGAACACTAGCAC
AAACTTTCTCAAGTAAGGAGCAAAAATGGTATTCATCAGTTCTTGGAAAGTGCCAGGAGC
ATTTGATAGTCCAAAGGGCATCACCAAATATTCAAAATGACCCAAAAAAGTTCCGAAGGC
AGTTTTGTGTATATCTTCAGGCTTCATTCTGATTTGGTGGTAACCTGATCTCAAATCTAA
TTTAGAAAAGTAGGTAGCTCCATGTAACTCATCTAAGAGATCTTCAATCACAGGTATAGG
AAATTTGTTTTTAACTGTTAATGCATTGAGCCTTCTGAAATCAGTACACAGTCTCATACA
ACCATCCTTTTTCTTAACTAAAATCACAGGAGCTGCATAAGGACTCTGACTATGCCTGAT
GAAGTGAGCAGCTAACAACTTCTTAATTTGATCCTCCATTTCTTGCTTTTGGTGTTGGGG
TACTCTGTAAGGTCTAATTTGAGGAGGGGTAGCCCCTAGAACTAAAGGAATAGTGTGATC
CAGTGTTCTATGGGGAGGCAGGGTTTTAGGTTCCTCAAACAGATCAGCATACTCCAACAA
CAACTTTTGAACTTGTGGTGGTGTTTTGCAGCCCTGAGGAGCATTCATCATAATATTCGG
AATTTGCAGCAAGAAGACTTCCACTCATTTATCCAACAACTTGTTAATTTTCTCTGATTT
CACTTCTTTAACAGTAGCAGAGTTTGTAAACATGGCAGTAGTAACTGTCTGTTGTTCTTG
CACAGTGAAACTGAATTGTTGCTTTGGTATATCAAAAGAAATAGGACTCACAGTTGTAAA
CCAATCATACCCTAGAATAGCATCATGACTAGGAAAGTGATATGATTCTGAAATTGTGAT
GTAGTTTAAGTTTGCCCAACTGAAACTCACAATTTGGTGATACTGCATCAGAAACCAAAG
TTCCTCCCCCAGATACAAATATAGTCCTTGGCTTTACTGGTATTAACTGGCAATTAGCTT
TGATTACAAAATCTTGGTTGAGGAAAGAAGAGATGCTACCTGAATCAAGGAGTGCCACAA
CCTTTTTCCCATTTATATGAATCACCACAGTAGGTGTAGGAACAGTCATTTGATGTCCCA
TAGCAAAAGAAGAAATAAACATGACTTGTTCTCCTTCTGACACAGTTTCAGGTTGATCCT
GATTGTGAACTTCTTCCACGTCTTGTGACAATTGCTCTTCTACTTCTGGTTGCATCATGT
GTACATTAGGCACCAATTTGCATTTATGTCCATGCATACACTTATCTCCACATCTCCAGC
ACTCCCCCACTTTTCTGATCTTTTGATAAGTATCAGGTTGCTTTGTTGTAGTTTGTGAGC
CAGTTGCTATTGACAGAGTAGAGAATTGTCTTCCCACATTGCTAGTGTTAGGTTTTTGAT
AGAAATTGGAGTAAGCTAAACCAGTTCTCTTAGGCACACTAGAGATAGGAGGGTGACAAG
GTTCCACATCTTTGGCCAACCAGTAAGCATCAGTGAGAGATTGTGGTCTCAGTGGTCTAA
TCTGAAACTTGATTCCCTCTCTGAGACCATTAACATAGCATCTAACAAACCATAATTCAT
TAAGCTCAGGGTTCTCTTCTTGAACATTAGCCATTAAGTCCTCAAACAATTTTGTATATT
CAGACACAGTGTTGTTTCCTTGCCTAGGAGAGTTAAATTTTTCTGTCAGATCATAAGAAC
CCTGTTCAGAAAATCTCTTGATCAGTTCAGCACAAAATTGTTTCCAAGTCAACTGTTTCT
TGAGGATGCCTGATCTTCTTAACCATGTATTAGCTTCACCAATGATATATAGCTGAGCTA
GAGATACTTTGTATTCCTCTGGAGCTGCTGACATCTGAAAATACTTGTTACATTGCCTGA
TCCATCCCACTGGATCTGTTCCTTCAAATCTAGGGAAATCTAATTCTAGATCCTTTGTCA
GGGACTTCATAAACTGAGCTTGCATGTCTTGTTCATATGTCCTATAGTATCCTTGCCACA
TCTGTCTGTCTCTGTTGGTTTGATAAAACTTGTTGAAAACAGGAGTCTGACCACCATCTC
TTGTTGTCACACGTGTTCCTATAGCACTCATATTTTCTGTTCTCTGTTGATTGTCATAAC
CAGGAGGAACAATTTGCCTCTGCACCTTAAGAGGTGGCAGATGTTGTGTCTGGATGTCTT
CCATTTGTTTTGTTTTTTTCCTTTTCAAGTTCCAACTGCTTTCTCAAGAATTCTTTTCTC
AACTGCTGCTCTTGCACAACTTCTTGATGCAGAGTAGGAGAACGAGCTGTGTGACTAGAA
CTTGCCAGATTAGTTCCTCCCCCATTTTGTCCCGCAGGTGGAATCAAGGTTTGCAGAGTT
TGACTGATAGTTCATAGTTGTTTACTCAGATCTAGTACCGCGTTCTCTATACTGCCCACA
TGTTTTGATGTATCACCTTGCTTGGAATCATTTGAATGCATGTCTTCCTGCAACTTGGAT
ACATCACTGCGGCAGACTAGCATTGTCCTTTTGCAGAACACCAAAGTCATCTCTTAGGGA
CAATATTTCTTGCACATCGGCCTCATCAAGAGTTGCCTTGCGCCCCATCGCCTCGATCTA
AGTCACGGGTTAGGAATTTTACCACTGATGAACAACAATCCTTCCTGTCACTCAGATCCT
GCCGCCGCCACGCTCCTCGCCACCTGTAGAAGCAAACAGATCAGTGCTTGGGCGTGGGAT
TTTATGAACCGAACAGAGAGTTCGATCAACCACCCCTGCTCTGCCAACCTATGCCCGAAC
AAATCACCGCCGCCAGCGCCACCAGTAACTCGCCTAATTGCCGTACTCCGCCACCAGCGC
CTCCTCGATCTCGCTCTCTCAAATCAGGGTGGGAAAAGGGTGGGAATCCTAGCTCCTAAG
AAGAATTTCATCCATGGACCCTCTAACTCCGAGGATCGTTGGCTCTGATTACCAATTTGT
CAGGACCCGATCGATCTATAGGGCTATAGCTTGGGGAGAAAGGGGAAAGTTCATCCCGAT
GTAAAGTATATTCGGAGTATATGCTTGTTCGAAGACAAGAGAGAAGATCAACATGCCAGC
TTAGCCACAACCCGGCAGCTTATATAGGCTAGAGGTTTTACCGAAAAGGGAAAATAAAGC
TACAGTAAAGACAAGAGGATTACTACAGTTAATATCTAACGGTTCACAACGAAGCGGTAC
GCGAGGAAGTGATCTCCACCGTTAGCTAACTGAACTTTTAACTGAACTTCTCCCGATCCT
GACACTGAGGCCGATATACCGTTTGTTTGTGTAGGAATATGAGCAACTCTTATCTGCATT
TATTCTTGTTTCAGGAAAGATTTTCATCAGTCAGTGATGCGAAGTTCCCGGCTGAATGCC
CTAGGGAGCTCTCAGACAATAGGATGAGTCGTTCTCGCAGCTCCAAGAAGATCCAGGAAC
TGGATAAGTACATTGAATTACTACACCAGGAAGTGATGCTAACGAGGCAGGAACTTAGAG
GAGTTGGCAAAAGCCAGCAGGAAGTAGCAGAAGCAGTTGATGATGTGAAGGTATGCAAAT
ATCATTGCTCTCTCATATGTAGGTTCAAGTATGTGATCCCTAACATGTTCGTTTGTTGTT
GCAGAAATACTTCTTCGGCTGAAGTCATTTTATCTATGAAAGCACCGGTTACCCTAGCTA
CAGTTCCGAGTAGAAGTCATTTTATCTCTCTCACAAGCTTGCTGTGCATCAAAAAATGAG
TGTACTGAGTTAAGTATGGGTGAAGACGCTCTCCTCTGTAGGTGTAGGAGTAGAAGAGAA
GCAGTGATTGCAATCCGATGATTGTCATGACATAAGCGATGACGACAAGCGTATTGGCGA
ACTTGTAGAGTCATACATGTTCTACTATTTGCTCTGATCCTGGCCACGAAGCTTCCGCCA
TGACCTGCTTGCCCAATGCCCACCTACATATAATCTGTCATTCTGCTGTTCAGGGTCATC
AGCCAGCAACTGGAAACACAACGTCGATGGAGGGAGCGGAGCACGCAATGGAGCCTGTAG
CCGTCGTGGCGGTGCCGTTCCCGGCGCAGGGACACCTCAACCAGCTGCTGCACCTGTCGT
TGCAGCTCGCGTCGCGCCGGGTGGACGTGCACTACGCCGCGCCCGAGCAGCACATCCGAC
AGGCGCGCTCGCGCGTGCATGGCTGGGGCGAGGAGGCGCTCCTGTGTCCTGTCCATCCAG
TTCCACGACCTCGCCATCCCCAGCTACGTCTCCCCGCCCCCAGACCCCACCGCCGACTCG
CCCTTCCCATCCCACCTCATGCCCATGTTCATGGCCTACATCGCCGGCGCGCGCGCTCCG
CTCGCGGCGCTCCGCTCGTACCCCATGAACGCCTTCGCCGCCGAGGAGGCCGCGCGGCTG
CCCAACGGTGAGGCGCTCGGGCTGCACTGCTTGGCCGTGTCAATGCTCGTTGGCAGAATA
GACGCCAGTCACCGGCTACTGCGAGAGAACGGCCTCGTCTACAGCGCCATCGAGCACTGT
GCGACCAAGGAGTTTGTGGAGTACGCCAGACGGGCCAGACCGTCGACAGAGATCTCGCCT
GGCGCAAACACATGCCGCGCGCTCGAGGGTGATTTCATCGACGTTGTCGCCGGGCACCTG
GCTGCCGACGGCAAGAAGCTCTTCGCCATCGGGCCGTTAAACCCGCTGCTCGACGCCAGC
GCGTCAGAGCAGAGCAAGCAGCGGCACCAGTGCCTGAACTGGCTCGACGAGCAGCCTCCA
GCGTCGGTGCTGTACGTGTCCTTCGGCACGACGTCGTCCCTGCGAGCAGAGCAAATTGAA
GAGCTCGCAGCAGCACCGCGCGGCAGCAACCAACGATTCATCTGGGTGCTGCGCGTCGCC
GACCGTGGCAACATATTCGCGGAGGCCGGTGAGAGCCGCCACGAGAAGCTGCTCTCAGAG
TTCACGAAGCACACGGAAGGGGCGGGGCTGGTGATCACCGGATGGGCGCCGCAGCTGGAG
ATCCTAGCGCACACTGCCACGGTGGCGTTCATGAGCCACTGCGGCTGGAACTCGACCATG
GAGAGCCTGAGCCACGGCAAGCCGATTCTGGCCTGGCCCATGCACTGCGACCAGCCGTGG
GACGCGGAGCTTGTCTGCAACTTCCTCAAGGCCGGCATCCTCGTGCGCCCCTGGGAGAAG
CACAGTGAGGTGATCACGGCGAAGGCCATCCAGGAAGTCATCGAGGAGGTCATGCTCTCC
GACAAAGGAATGGCCGTGCGGCAACGGGCAAGTGCGCTCGGGAAGGCCATCCGCGCCTCC
GTGGCTGACGGCGGTTCGTCGCGCCAGGACCTAGATCTTTTCACTGCTTACATGACTAGG
TGATCGACAAAATGCCATCTGTAACGATGGCTTTTCATGCCGACACAGTTCAGCCAGTCT
GATTCTAGATTACCAGTAATCGTGCACGTGCCAATGCATGTATTAACTAATGCAAAAAGA
AAAACATGTTAATTTTTATTCAGTTTTTGAGCTATATAAAGTACATCTAATTTTTCCAGT
GAGATCAAATTTTCAGCTTTGCTTCCTGTTTCTTGACTTGAAAAGTTGTATCTCACTAAA
ACATTACATCAAATACAAAGGGTACTAATAGACAAACCCTTTGCCGACGTGTGACTACAA
AAAATTGTATCCTTGTAAAAGTTGAAGGCGCTTTACAATATAGCTAACTGAAATGTAGAA
GGGCTAGAATAAACATGATAACCAGAAAATCATTTGTCCTATCAAGTTATCAGTTAACCC
ATTAAATTTATAACATGTCTTATGCAACAGTGATGTAATAATGAATCATCTCCGGTGATG
GAGTTGGCGGCTCGTCGGATGCGCGGCCTTGGGGTCGGTGTGTGTTCTTGTTGGTTGTAA
GTCGGAGCGGCGACTCAGGAATAGGGTTGTAGAGTGTCGATTTCGGGTTCTCGGGCAACG
GAGTTGGCGGCTCGACGGATGCGCGGCCTTGGAGTAGGAGTGTGGATCGTTTTGTTGTAT
CGGTTTTCGGTCGGTTTTGCTTATTAACTGACCAATTCTTTTTCTTCTATATGAAAAGGC
AGAGCTCCTGCTGGTTCCTCTAAAAAAATGAATCATCTCCTACCATGTTATCATTTAGTG
ATTACAATAAGAACCAAAGAAGAATACAAAAAACAACTTAGTTTACATATAGAAAGGGCA
ATGGTTTCAATATCATCATTATATTAAGAGAAACACACCATGTATTATCTACCCTAACAC
AATGCTAGTGCAATCTGGAAATTTTATAAATAGGTGATAAACAAACAAATCTCGATTTTA
GAGAGCCAAATCAACCCCTCTACACGACTGCTACCTCGTACATAATGGACATTGCAACCA
ATAACTACAGAATCCAATTCATCCACTTAATGGAAAATGCCCCAAAAAATTAATGAAAAC
TTGGCTCGAGAGGATAGGAGCCCCCCACTCTCTTTTTGGTTCCTCGCCATTTTTTCGCCT
CAGCCACATTTTAGTCCCACTTACCTTCCCTACCTCATCACAGATGCAGACAATAAACAT
AGTGCTATCATACAAGAATGTAGACATCATTATAAACAAACAAATCTATATTTTCCTTTT
CCTTTTTTGCTTTTTCTTTCTTTCTTCGGCAATTCTTTCACTTTCTTTGTGGAGCATGGA
GGGTTGGACTTCGCGGCCTCTGCGGATGGAGGTTTGTGGCGTGCTATGTGTGTCCGATCT
AGCGGTTTTGATAGCATGGTTAGTTCTTCATCAACAACGAAAATATGAGCTGGTATATTT
TATTGTCATACCTTTTGTACGAAGTGTGTGATTTGACATTTGCATATTAACAATCACCGG
TAGATAAGAAGAGGGTAAAAGCAACAAAAAATGCACAAAACCCAGTATCACAATTCAGGT
AAAAGGCTGTAGGATCCGAAGTATGTCTAGAGGGGGGATGATTAGACTACTTGACCAAGT
AAAACTTAGCCTTTTCCCAATTTTAGTTGTGCGTCAGTTTTAACAATTATGACTAGTCAA