Contig Data
morexGenes
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Map Locations of contig_108118 (4881 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_108118

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_980 2 2400 bp MLOC_980.1 Available Available LOC_Os04g40130.1, FRAME:-3, EVALUE:0.0, 13104.m03896 protein Rf1, mitochondrial precursor, putative, expressed





CDS Structure of MLOC_980






Contig Sequence (4881 bp)

>contig_108118 4881 assembly3_WGSMorex_rbca.fasta
TGTGACAAGGCCGAAAGCCACACCTGCAACCGGAAACCCCTAAATAGGAGCTTTTGGCTT
AGAAGCCGGTAGACGGAAGCTCGCTGGAAGCCCAACCAAACACCCTTGTCCGGACCGCAT
CTCATTATATAGAAGAATTGCCTTGGCTTATAAGTTGTGGACTATCGCTAGGATACGTCC
AAGTACATCACGTGATAAGGAGAAGAGTTTAAACTAGAAATTTAACAGGAGTCCTAATCT
ATCTATCTTGTTTAACAGTTCCTTGTTTGTTGTCTATATGCACAAAGTCATTCTGAGTTT
CTAACAAAACTTATTTTTGCATTTTGTCTTCGAATTTCAGAACGGCATCAGCAGCATCTC
TAGCCGCGTATACTGCAAAACCGACTCTCTGATAGTATGATATACTCCCTCTGTCCGGAC
GCGGAAATGGATAGATACGACAAATAATTCGGGACCGAGGGATTAGTTGAGCACACACCA
ACAATTCATACAAACTACTTCCACTGTACCTAAATACTTGTAGTTACAGACGGAGTTCGT
ATAAATTTAAATTTGAGGAATATATAACCCCCATCTCGACAAGACGTCAACATACATCCG
TACAGGACACAGGGTGTCAAGATAAACCCCCGCCACCGCGGATGGATTTTCAGTCTAAGG
GGGACGCTATGATGAGCGAAACTCGATAAAGATATAAATCAGTTGCTCGTATAAGATCCT
AATAACTACGTAGGATTTGCTGTCTGTCTGAAGTAGTACAAAGAGCCGAACTGTCTGAAG
AAGAAGATTCAGGCACATAAGAGTTATAGCTAGCTATAACATATTTCCAGATGCCCAGGA
AAGCCTAGCTTGCCCGGCAGTCCGCCATCAGTGTGCACTTTGTAGGTGCCATGACTCAGA
CAGATCGTCAAGAAGTGCAAGTTGTATGGTGTAAACCATTAATTTTTCCACTTTACGTTT
AGAATTAAGCTCACCATCATTCACCGGCACTGTTTTGTTTGTCTAATTACACACGAGTGA
TTTTATTTCCAGTCGGATCGAACGACTGTGCGCACAGATGTACATGGCGTGAGGCCCGAG
CTCGCGAGGTGGCTAGCTACTCCTTGGAGCTAACAAACCGGCAAGGCAGCATCTCAGCGA
AGCATAGCGAGCCAACCAAGAGCCCCAGCGTGGACAGGGCGGAGCCGGCGGCCCATGGCA
CCCTCAAGGACACCCAGCTCGTCATGCACACGACGAGCGCCACGGCGAACGACCAGAGCG
GCACCCGCGCCGCCGCCGTCTCCGGCCATGCCCTTGCGCGGCCTTGCTCCGCTTTCCGGC
CCGCGCACCACGCGAGCAGCGACGATGAGGCGCAGAGGACCATGAAGCCCGCCGCGAACA
CCGCGAGGGCGGCGTGCTCCCCGCGCGCGCCCAGGTCCACCGCGAAGGCCAGCCCCGCCG
TCGCCGTGACCAGCGCCAGTGTCCGGGCGGCGGTGGCGGGCGAGGTGCTCGCAGTCGCAG
AGGGAGCGCGTGCCAGCTCGCAGCTGCACGGGCAGCCGGTTGGCTTGTGGCCTATCGAAG
CAGGAGGCAGCAGCTGGTGCTCCACGTCCGGGACCGCTTCGTCTAGCTTCGTTTTCACCT
CCATTTGGGCTTCTGGCATGTGAGTGGCACGGTGAATGAACGCCATATATAACGGCGTGC
AACGGCCGGCGTAAGCATATTCGTATGGTTGTTTTTAGAATGCAATCATACAATGCCTAG
ACCAGGTCGACCGAGTTTTAGAAATTGATAAGGTCATCAGGGACACCTCGCGATCACCAT
CTTTCACTGAAAGAATAATCGGCATCAAGGAGACATCAACGTGTCAAACTCTGGATTTGC
TCTCGAGGTACCACCACGCTCTTAACCAACTGTTTGTAGCAAGAAGGAATGTCTGCAGGA
TCCACGGATTCGCCCATGTTATGTCAGTGTAAAGTAATGGCATAGAGGCGGCAGAACAAG
AAAACAAATGACGACAGGAAACTTCAGCTTTATGCACTTTCAATAGAGACTCTGAGAGAC
TCACCAACCCACCCTTAGCAGTGAAAGAGACCCACCAGGTTGGTCCTAAGAGCTATTGGC
CCTGTTTGGATACTCTAACTCGCTAGAGGTTAGAGTTAGTTTCTAGCTCATGATTAACCC
TAAACTAACTCTAACCAAAAAGGTGTTTGGATGATAGGATTAGATTGACAATAGTTGTAC
TTGATGGAGAAAGGAAAGTGATTTTTTAGTGGGTCCCTTGAGAACTAGCTCCAATTAACA
CCTATTACCTAGTGGATAGAAAGAGAAAAGTGACTTTTTAGTAGGCTCATGAAAACTAGC
TTCAATTAGCACCTCTTGGGTGGGCTAGTTTTTTTGGGTGGGTTAGATGCAACTAGCTCC
ATTCTAACCCTCATGTTTGGATACTTTAGAGCTATTTGAGCCCCAACTAGCTCAAACTAA
CTCATTGTGAAATTTCTGTTGTGCTTAACAAACCGGAGCACAGCTTAAAGATAAGTAAAC
CAGTGCACTCTGAACAGAATAGTTCAAGTCATTAGCTCTGATGTAAAGCACAAGGAAGAA
ACACAAGTTTAAAAAAAGCAGAAAAAGGACACAAGAACTTCCGTGTGCTGAACAAGCTTG
TTTAGCTCAGCACAGTTAGTGCTTCACTGTTAACGCACCTTGCTTAACACCACCACTATC
TTCTGGAATGGAGTTCACACACATATACCTTGTACGAATAATAATCTGAGTATCATCTCA
GCGGCAGTAACAGGTATGAACTTGCATTCTGAAAGAGCGAGCTATTACCGTAGTAGAAAA
TCCGTCTATCCTTGCAGATAATATCCCTAGTTCTATCAAGCACCAAAAGGCAGTGTAGCA
TAGCATCCAAATAAATAGAAATGTGAGTCATGATCCAACCAGGTTGAAATATCCAGTCTC
TCGTATTCTGAGTACATGGTGATCTAAAAAAAATCTCGACCAGTGCTTTCCATCTCTGTT
AAAATTTTGGTGTTCACATATTTCATCACCCCTGTGTTTATAGATGACAAAACATTCAAC
CATTGCAAAGGCTAACTTCGGCGTCAGGCGTCACTAAAATGATCATTTTGCACTCCTGCA
AGAATTCAGGACATGATGCGGCAATGTAAAAAATCAGAATGGTATTGCATGCCAATACAG
GTTGAAAAAGCAACTCTTATGCTCATTTTTTAGTTGGTCTGGTCTGAACAGAGCATGCAT
CTCTGCTTCCTACAAAATCTCTTGCTTCTGCTTTTTCCAAGAAGCTCAGGCTTTTACAGC
ACCTTCCCTGGCCAGACGCTCATCCTCAGTGGTAAGTCCCTCGATCAGTGAAATATATGT
ACTGTCATCAGGGGTGATGCCATTGCCCACCATTTCTTTCACCAGCTCCTCGGCATCGTC
TCCCTGGCCATTCTTGCAGAGCCCTTGTATCATTGCATTATATGTCAAAAGTGTTGGGTT
GAACCCCTTGTCTATCATCTCATCCCGAACCTTCAGAGCATCCTTGATGTCACCCTTCAT
GCTGTAGCCGCTGATCAGGGTGTTGTAACTCACAAGGTCTGGCTTGATACCTCTCTTTGT
CATCTTGTCAATGAGCCCACGTGCTTCATCAAGACGCCCCAACAAGCACAGCCCCCTCAT
CAGAGTATTGTATGTCACGTCATCAGGTGTGATCCTCTTCTTCTCCATTTCTCCCATGAT
CTCGAACGCCCGGTCCATATCTCCACCAGTGCAGTGGCTATTGATCAGGGCATTGTACAT
GACAAGGTCAGGCCTGATGCCTCTCCTCACAGCCTCATTGAACAGCCTATCGGCCTCCTG
AACCATCCCCTTCTTGGACAAGGCATATATCAGTGACGTATATGTCACCACGGTCGTACG
AATCCCTTTGGCAGCCATATTTTCAAACATCTTCATTGCTTTCTTCTCCTTACCCTCTTT
GCAGTAACCGTTGATCAATATATTGTACGTGAAGGCATCTGGTGCAAGCCCCTTTCCAAC
CATCTCCTCAACCAATGCATGCGCCTCCGCAGCACGGCCCTCCATGAACAACGCGTGCAC
AAACAAATTGTATGTCGCGACTGTCATGGAAACCCCCCTCGCTACCATTTCTTCCCGACA
ATGCAGCGCGGCCTCCAGATTTCCCCGGTCACAGTATGCACCTATCAACGAGTTGTACAT
CATGGGATTTGGCTCCACCTCTCCCTTAGCCAGCATTTCCTCGAACACCTTGGCTGCTTC
CTCGACCTTCCCGACCTTGCACCACCCAGAGATAACCGTGGCGTAGGTGTACTTGTCAGG
GGCAATACCACTGCGCTCTCGCATCTCCCGCATGATATCCAGCCCCGCTTGGACGCGACC
GCGGGCGCAGAACCCGGCGATGGCGGTGTTGTAGGTGACGGCGTTGGGGCTGGGCATCTG
CCGGAGGAGCTCGAGCGCGCGGACGGGCTTGCCCGTGGAGCAGAGGTGGCGCAACATAAT
GTTGAAGGTGGTGGTGGAGAGCGGGAGGCGGAGGCGGAAGATGTCGGCGAAGAGGACGAA
GGCGGGAGCGGAGGGGAGGGAGGAGAGGAGCGGGTGGAGCGTGGCGGTGGGGATGGGGAG
AGAGAGAGACTTGAGCCGCGAGTAGAGGCTGAGCGACGTGGTGTGCGGGCGGCCGGCGAT
GGAGGCGGTGAGGAGCAGGTGGGGCAGCGACGGGGTGGCGGCGAGGTGCGGCAGCACGGC
GAGTGGGGAGAGCGCCGGGTCGGCAGACAGAGCCGACTTGAAGAGTGCGAGCGCCGCGGC
CGGAGTGGGCGCCGCGCGGGCGGCCGCCGCCGCGGGCGCGCGCGCCGGGGGGGGGGGCCA
CGGGGGCGCTGGCGGGACACG