| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_107866
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_945 |
2 |
1383 bp |
MLOC_945.1 |
Available |
Available |
LOC_Os01g52240.1, FRAME:-2, EVALUE:2e-174, 13101.m05463 protein chlorophyll A-B binding protein, putative, expressed |
CDS Structure of MLOC_945
Contig Sequence (2109 bp)
>contig_107866 2109 assembly3_WGSMorex_rbca.fasta
TTATTTGTATCGTAACTATAAATTCTGAAATTATAGACATTTTTTATAAATTAAGAGCGT
ATGCCGTGTGGTATTTCTTTCTCCCGNNNNNNCGCATGGGCCCTTTTGCTAGTCTTTAGA
ATAGGCCGAGGAAGGGAAAGACCATCGATAGCACCTGTTGATAAGAACGATGTAGGTTAG
TTGGAGATTAGTTTGTTCTGATTTATTTTATTAATTTGCATAGATGGACTAATAAAATCC
TGACTTTCAAGAACAAATATACAAAAGGCATATGTCTCAAATCATAAAATAAAATTGCGG
AGAGATCTCAACCAGACTTCTATCCTGCATTTAGGCAAATATTTTTGACTGAAGGCCAAC
AACGCCTCAACCATGTACCACTGTCTTCTCAATGCAGCCCTGCAAATTTGCCCATGTATA
TGATGCATAAGTTTTTGTTCCTTTTTTTTGTGAATGATATATGATGCATAAGTTGCCGTT
GCCCAGAGGACAACAAGGTAATGGTGTTAACCAAATGCGAACCCAACGTATTTGTTCAAA
TGATCACGTCAAATGGGTGAGATCAAAGGTGCGAAAATTATAACCTTTTGCACAGAATCC
TCAAATTTTTCTCTTCAGACAATCGAATCCTCGTAATTTACATCGTCGTATTACAACTTG
GACAACACAACGCCACACTTCACCGCAAGCGCCGTGCACACACACATACACACCTTACTT
GCCGGGAACGAAGTTGGTGGCGAATGCCCATGCATTGTTGTTGACGGGGTCGGCGAGATG
GTCAGCGAGGTTCTCGAGTGGACCCTTGCCGGTGACAATGGCTTGCACAAAGAAACCAAA
CATGGAGAACATGGCGAGGCGGCCGTTCTTGACCTCCTTAACCTTGAGCTCGGCGAATGC
CTCAGGGTCGTCGGCAAGGCCGAGCGGGTCAAAGCTACCGCCCGGGTAGAGTGGGTCGAC
GATCTCACCGAGTGGTCCACCGGCAATGCGGTAACCCTCGACGGCGCCCATGAGCACGAC
CTGACACGCCCAGATGGCAAGGATACTCTGCGCATGCACAAGGCTTGGGTTGCCAAGGTA
GTCGAGGCCGCCCTCGCTGAAGATCTGGGATCCGGCCTTGAACCAAACAGCCTCACCGAA
CTTCACGCCGTTTCGGGCCAGCAACTCGGGGAAGACGCAGCCGAGCGCTCCAAGCATGGC
CCAACGGCAGTGGATCACCTCCAGCTCGCGGTTCTTGGCGAAGGTCTCGGGGTCAGCAGA
CAACCCAGCAGTGTCCCAACCGTAGTCGCCAGGGAACTCACCGGTCAGGTAGCTCGGGGG
CTCACCAGAAAGCGGGCCGAGGTAGAGCACACGGTCAGAGCCGTACCACGGGCTGCCGGA
GGCAACCTGCTTGGCCTTTGCCGCCGTTTTGCGCATGGTGACGCGAGCCTCACCAAAAAC
AGACGATGATGGCAAGTTCTTCACTGCCTTGCCGGCAAAGGCTTGGGAAGAGAGCGACAT
GGTGGTTGAGGCCATTCTGATCGATGGAGGTCCTGTCTGTGTGCTCCAAGAATTAGGAAT
GAGTGTGGAGATGGTTTGAGATGATCGGAGCAGGGGCCTTCTTAAGGCAATGGACGGACA
GAGGGAATCGGCCGTTGTAGGCTGACAGGAGAGAGGTGGAAAGCAAGAAATCTGTATCTT
GGATGTCATTGGTGCAGAGTGAGAGGCACAAGGAGATCAGATATACTTGTGGATATGGCT
AGCTGCGAATCTCCTTAGAGAACAGGGATTGGATTACACGCTGATATGCACGTGAGCATG
CCATGTTTTTCCACCAAAAGGAAGATAGAGGCATCCATCCTTTTAGCCAAGGATTGCCGG
CGCAATTGTTGAGCAAATTTCTATTTATCTGACTGTGCATTTTATTGATATCGTTGGGTA
TACCATTATGCTTCTGGTATCTGAAATAAAAAATGGAGGAAGCGAAAGATCATCGAGAGC
ACCAGATGATAAAATGGTGACTGTCAAGTACAAATATACCAGAGGGCATATCTTTCAAAC
TTTTTCTTTAATAATATATATATATATATATGTATATATATATATATATATATATACATT
ACCACAGTC
