| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_106745
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_848 |
3 |
1883 bp |
MLOC_848.2 |
Available |
Available |
LOC_Os04g57950.1, FRAME:+1, EVALUE:0.0, 13104.m06080 protein dihydroorotate dihydrogenase protein, putative, expressed |
CDS Structure of MLOC_848
Contig Sequence (10368 bp)
>contig_106745 10368 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGGCTATCGCCCCCTCTACGCACTTGCACACATGAAGCCTAGAA
TGCCTTCCTTACAACCCTAGGGAAACGAAGTTGCCAAGTAACAACTTTTCTTCCTAGGGC
TCTCTCATCAATGGCATCCCTTTCGACCAGGGGAGAGGTGGAAAATCCAAAGAGTTCAAC
GCACTCTCTCTCTTCTTACCCCCTCTCTCCTGTCGTATGTCTTGGAGGAGGTTGAGAGGC
AAGCTGAACCGGCAATAATTACATACTTTCAGAGTTCTCATGTGAGGAAATAAAAGATTT
GTCAAAAATATGAATTACGAAGGGTTGGTCGAAGAAATATGAATTGGAAACATAATCTTG
ATATACCTTGAAACAACACATTCTCATTGTTGCCGGCGACCAGGCATCATCATAACAACA
AATAAGGCAAAATCATAAGAAATATAAAAGGAATACCAGCAGAACCTATAAATGGTGAAA
AATCATATCCTACTTATCACATGAAGGTTTGCGGGGTGATGGCATAGCAAACTCTTCCGC
CGTTAATATTTTGTCAAGAATCTGGTGTGGCTCATCCTCCCACACAGGATGAAACCAAGT
GGCTAAACAATGCCTTTTCTTCTCATCAGAAATATCTCACCCATGGCATACCCCTACTGA
TTAGTTGCTCCATCAACATGAGATCTTATATTATGGGACGGAGGAAGTACATATTTGCTA
CGATTTTTCTGACTAATGTAGAATTCAGGGCAACAATTCATCGGTCGACCATGCTTGCTA
GCTGCATCATCCTTGTTTTTTTGGCGGAATGTATAGGAGATGTTAGGTTCGTTCGCACGT
CCATCCTGCCAAATCCTGGACGTTGTTGGGGCGCCAAAAATTGGCAAGGGATTCGGTCGC
CCACGTTTCTGCCAGCGATTTGGCCAAGAGTAGCTGGAGGGAGCTGAGGCGGGCTATATT
GGAGGCGATCCAAACCAAACAGCCCCATAGTATTTTATTTTTGTGGAATTCATCGTACTA
CTTGTTATCTCACTACTTGTCATTTCAGCATTCCAAGGCGTACAAATACATTTCTCGCAA
AAAAAGGCGTACACATACGAATGGCTTGTCTATCAAGAAGCCATTTGTGCCTTGCTTCCC
AAGTTGTAGCATACGGAGTTATTTCTACTGGTCTCTTCGGATTAGGGATAGCACCCACAG
AGTATGGATACGGGTGGAGCCTTCCTGTACCTTACCCGTTTCGTCTAAGATTATCCATCA
CTCTTATCCATACCCGTCAATGGGTATAATGTTTTCCCATACCCGTTACCCGATAGGATA
GACGGTTACCCACGGATAAAATTACCCGTATTTACAAAACATCAATTTAAATAACTTATA
GTTATAAACTACATTGTATCATATAGTTTACAAAGATAGATTATATGTACAACACATACT
TATAAAACAACATCATATATTCATAAACAACAACATATAGGCATGCACTTCCAGTTCACA
AATTATTAACATAGTGTAGATTGTAGAGATAATTTTGAGTTACATAGATTTTATATGGAT
ACATGGGTATATGTGTATGGGTTATATGATCCCATACCTGTACCCGCTCTATCTGATGGA
TTTCAGTTTTTTTATTTATATATCCATGAATAATTTTTTGTCCCATACCCTTATCCTAAT
AGGGTTTTTACCCGTAGGATAAGGGTAATGGGTACCCATTGCCATCCCTACTTCGATAGA
AGAAAGTTTTTTTTTAATTTGAAATCTGGTCCAGCGAGCAAGCAGAAGAGATGGCGAGCC
GATAGATATATTGGCCGAGCTGGGCCCGTGTTCCGGCCCAGCCCAAGGACAGTGTCCTAC
TTCTCTTCCACGTCTGAGCCCTCGCCCTCGCCCCTTCTGCTTGCTCCCCACGCCGACCAG
AACGCCCGCCCGCCCGGCCATCCCGCCGCCGCCATCGCCGTCGCTGTCGGCTCCTTCGCC
TTCCCAGCCATGTCGTCCTCCGCCGCCGCGAGCGCGTGGCGGCGCTCCCTCCGCGGCGCC
CTCCTGCGCGGCTCCCCGTGGCGCGCCCCCACCCCCGCCGGCGCCCGGCATGCTAGCAGG
ACGGTCTCCCCCGTTGCAGCGGCCAAGGGATCCTCCGTCGGCCCCGTTAAGGTGCCCCCG
CCTCCACGCAAGGTAACGCGTCCCTCCCCGCTGGCCGCCGCCTCCTCGGCATTGTCGCAT
ACACCTCGCGCGCGCCCTGCTCCTCCGCGCGCCGCTTCCTCTCGAGAATGGACCAAGCAG
CTAGCGTGTTCTAGATGCTGCGCTCGCTGGTTGCTGCCCGTGCTGGCACGCTGCGCTGGT
GATCCGGTCCATGCTTCCATCTTTTGATCAAAGATAATATTTTTGTGTGACCTTTTGTAG
CACAGTAAATTAGTTGCCATCCGTCCCATCATGATTTGAATACGAAGACAAAGGAAAAAT
GATAATCGTACTTGATGTTCCTGTAGATGGAGGATCTACGGACTGCACTATTCTTGGGAT
TTTGACAACAATACTGGTTCTCTTTTTGTTTGAAAGAAGTGCATTCTTAAATTAGTTGTC
TGTAAAGGATCATATGAAAATTGAGTTGATCATTCAATTATTGTAGTGATTATCTGTTCC
TTTACTGTCTCTATCATTTGATTTGTTGACCAGTCCTTGTTGTTTCTTGTCAATTTGGCA
GGGTAGGCTTTTAACTGGGGCCATGATAGGATTGGCCATTGCTGGAGGTGCTTACGTGAG
TACTACCGATGAGGCAACGTTTTGGTACATGACACTAAGTTCTTGGACCTACTTTCATTA
AAACTAGTTTAAATTACATAGCATGAAAGCACCCCATAGGTGCTTGAAATTGCCAGGATT
CTAGGAACCCATAAGCTCCTGCTTATTTCTACAATTTTAGTAGAATTATCGACTTATTCA
CTTATGGATATGCCCTTTGTGATTGTGCAGTGGGTGGTTATTCAAATCAACAGAACTCGT
GAGTCCACTTTTTGCACTACTAGATGCTGAGTTTGCTCATCGTTTGGCTGTTTCTGCTGC
TGCTCATGGATTTGTCCCAAGAGAAAAGAGACCTGATCCACCAGTTCTTGGGATAGAGGT
TTGGGGTAGGAACTTTACAAATCCAATTGGTCTTGCTGCTGGTTTTGATAAGAATGCCGA
GGCCGTTGAGGGTCTATTGGGCCTTGGATTTGGCTTTGTGGAAGTTGGCTCTGTAACACC
TCAGCCTCAAGAGGGAAATCCCAAGCCTCGAATATTCAGATTAAAAGAGCATGGGTAAGC
ATTCATATTCTGTTATTGTTATCCGAACTGTCCCGTGTCACTTTAATTTGTGAAATAAAT
TAAAATGATGTGTGGTGATTTCTTGTACTTGCCTTCTCTTCAGTGCTGTCATCAATCGCT
GTGGGTTCAACAGTGAAGGAATTGTAGTAGTTGCTAAGCGTCTTGGGGCACAACATGGTA
AGAGGAAGATGGAGGAAACTTCGAGCTCCAGTGATGTAAAGCAAGGAGGGAAAGCAGGTC
CTGGAATTTTGGGAGTCAATCTTGGCAAGAATAAGACAAGTGAAGATGCTGGTGCTGACT
ACGTGCAAGGAGTTCATTCTTTGTCGCAGTATGCTGATTACCTGGTATCCATCTTTTGCT
CTTACAAGATAACCTCACATCACACGTTCAGTACTTTCAGTCTCATATGCACCATAGACT
TTAGATGGATATGGTTGCTAGAATAAACAACTTTGCATTCATTCATGTTGGTCTGTTCTC
ATCTAACGTGGCTCATCAAAGAGAGAAAAACAGCATAGCTAGAGAACTGTTTGCTTCAGA
ACAAAATTGATGCATTTCTTGAATGTTTTGTCGTCAATGCACAGTGGAGAAGAGAGGCTT
ATCCTGGGAAACTGTGTAATTCATGATTGCTGCCCATTTATTATCATCTGCTAAAACATG
TCACTACTTTCGTGTCGAAATCAGGGGTTATGCTCTGCATCTGAAGAAATACACCTCGTT
ATTTTGTGTTCTGTCTCAAGCATGGCATTTGACTGCTGCTGGATGAGCAGTGTATATGGA
CATGTGTCATAAATGGTAACAACTGGTGTCTTGCTCTTAACGCAGGTCATAAATGTTTCT
TCCCCAAATACTCCTGGTCTTCGCCAATTGCAAGGTAGAAAGCAGCTGAGAGAACTTGTG
AAGAAGGTCTGTGGTCTTTCTAATTGAAGTGGATCTTTTCTTCATTTCCATGGGAAATTA
GTATGACATACACTGTATGTGCAGGTGCAAGATGCACGAGATGAGATGCAGTGGGCTGAA
GATGGTCCACCACCACTGCTTGTGAAGATCGCACCGGACTTGTCAAAGCAGGATCTAGAA
GACATTGCTGCGGTAACATACTGAACTTAAGCCTTATGAAAAATGCTCTTCGACTGTTGA
GGAATTTTTTTCTTATGCTTTTGCTTCTTGTTTTCCAGGTTGCTCTTTCTTCCAAGTTGG
ATGGCCTGGTAGGTGGATAATTCTTCCTCGTCACACTTTTATGTGTCACTGCACTGACTA
ATGTATTCTCTATCGACATTGTTAACAACACAGATTATATCGAACACAACAATTTCTAGG
CCTTCTCCTGCAGACGCACATCCACTAGCTCAGGAAGCCGGCGGATTAAGTGGGAAGCCT
CTGTTTGACTTATCTACGCAAGTTCTCAGGGATATGTATATCCGTACATCTGTGCGTGCT
TTATCCTGTTTCTTACTTTTGTATTGTATCTGTTTACTTTAGCACATCTTCCATCCTGGT
CATTGCATTTTTGGTGCTACTGTTTCTTTTCTGGAGTATCGTAACTCTCCCTCATGAGAG
AGTGTCTGCATATCCTGCAGGGCAAGGTTACCCTGATAGGCTGTGGTGGTGTAACTAGGT
AACGTTCGTTCTGTATTTACTTTGACGGTGTTTTTCACTTTCATCAACACCAAATATCTA
ATCAAATTTCTAATGCACATACAGCGGCGAGGACGCATACAAGAAGATACGTTCTGGAGC
CACGCTTGTCCAGCTTTACACTGCACTTGCCTACGGAGGTCCAGCTCTCATCCCGAGAAT
AAAGGTGATCTAAATCTTACACTTGTTTTACTTAGCATGAAGCTCACAAATTGCAGCACT
TTTCCTAGTTACTACAAACGTATCATTGTTCAGTAAATGAGCTCGACCATCCTGATCGAC
ATATCTTAGCCTGCTCCCTTGTGTATGTCTGAATTGAATTCTGATGCTGATGGTTATTCG
ACAGGCCGAGCTCGCAGAATGCTTGGAAAGAGATGGCTTCAAGTCTGTCCAGGAGGCAGT
GGGGGCAGACTTCAAGCCCTTGAAAGCCTGAACACCAACTGATATCCTCGACGACGCTAG
CAGAATTTTCCCATGAGCGTGCTTTTGCCCCACTCACTCACTCGGACGCTACTCGAAAAG
CGAGCGAAACCAAGTCGAAACTATTTTGAGGATGTGTTACTAATCATATACAGCCTTTAG
TAAGTACGTAGTGGTCTACGTGCCAGTGGTGTATCCATGGATGATGGCATCCGGTTCTTG
TTTGCTTGTGAGCGAGTTGCACAAGGAGGAATTTTATAGTCAACTCATGTGTATATCTCC
ATGCTTCCTTCCCTGTGGTGAAACAATGGCCGGTTTACGAATTGCGCGAAGGATATCTGA
AGCTGCTGCATTTTGCCTCTGTCGTCCTCCGTAGCAGTATGACAAAAAAAAAGTTTTTTT
TTTGAACGAAAGGGGTTTCCCCCCTGCCCCATTTATTTTTAAAATGAAGCAACAGAGTCT
TACAAGCAGCACCAAGACAGCAACAAACTAAAGAAACCATCTCAGACCATCTAAACTAGA
AGACAGCCAAAAGCAGCAGCAAAATCAGCCAACACCTCTAAACAGTCTTACATCGAACAA
ATTTATTACAGACACAAAAAGGACATTACTCTGCTCCCTTGTGTCCTCCCAGCATTATCT
TCACGCGATCCGAAGCAATTCCCCACATTTCTTGTTCAGCAATCTGATATAGTCCCACAG
AAGAGCAGCTTGCGCATCGGTGAACATGATCTTCCATTGGTTCAGGTAGACTTCCAGCTT
TGTGAAAATGCATTTTACACTTTTTCAAGATCGGCCCTGAAAGCAGAATTCATTTCTTAA
CTTCCAAATGCTCCACAAGAAGGCATCAATCATCATATTTAGAACATCATAACTTTTAGG
ATTGTTCCATAGCAAGATGATATCATCAAAATTTGACACTTCAGGTTTGTTAACCACCAC
AGAAATAAACCCCCACAATTGTTTCGCAACTATGCAATCAAAGAACAAATGTTGCACAAA
TTCTTTACAACTGCAAAATAAACAAGTAGAATCTTCTACTGGCCTACGTTTTCCCAGGTT
ATCTCTCGTTAGTACCTTGTTGTAAATACACAACCAGAGGAACACATGTATTTTTTGTGG
GCATATTACTTTCCACCAGTTATCACCAAAGGTAGAAACCACTCCTCCAAAATTAATTTG
ATTGTAGAAAGACTTGACCGAATACTTGCCATTTGCCTCTAGTGTCCATATTGGGAGATC
AGGATCATTAGACAAGGTATGCTGCCTCACCACCTCAACCAGATGGTCCCAGAGGGCTAA
GCCTGCTCACTCCACACATCTCTGGAAAGACAATCTAAGGATATCCCCATCCCAAACCCG
AGCCACTGTGCAGTTTGTTTGATTGCAAATATCAAATAGGTTCCAGAACTGTACTTTTAG
GGAACGATCCCCGCCCAGACGTCAATGCCAGAAACTAATAGATTCCCCATTACCCAGCTT
CCATTTATAAAATACTTTCGCTCCAGACATAGCCCATGTGATGCTCTTCCAAAAAGAGGA
GCCACCACTACCCCCACTCCAGAGAATGTTTGGGGAGTTTACAGAATATTTATAACTAAT
AATTTTTTTTCCAGTCCCGAGTTGAGTCATCCAAAAAACGTTTCCCTCAAGAAGCCAACA
AAGCCATATTGTAATCTTCGAGGTTAGGGATCCCTAACCCACCAAACTCTTTCTTCCTCG
AAACCTGCCCCCACCTAGCTAGGTGATATCTATGATGGTCATCCAGATTACCCCAGAAGA
AATGAGCCATCTGGGTGATAGCATTAATAGCCCACTTTGGGAATCTAATCACGAACATAA
GATAAATGCTGATAATGCAGGCACAAAGCAGGATAATTTTTCCTTTGTTGGTAAGAAACC
TACCCATCCAACCAGATAGCTTCTTAATGAGTCTATCTATGATTGGTTGGATGTCTTCAC
GTCTGAGGTTATCATAATGTAAAGGAACACCAAGGTATTTAATAGGGAAGTTACCAAGTT
TACAATAGAAAATTTGTGCAAATTCCTTAGACAAAGCTTCTTCCACATTAATGGTCATAA
GATCACTTTTATGGAAGTTAATCTTCAGCCCCGAAAGATTTTCAAAACAGGATAACAACC
ATTTAAAATGTTTTGCCTTTTCCACAGAATTCTCCAGAAAGAGAATAGTGTCATCTGCAT
ATTGCAAACTGACCACACCTCAGGAATGATGTGAGGTAAAAGCCCCGCAATCAACCCATG
GTTAGCAGCTTTTTGAAGCATTTTTGTAAAAACATCAGCAACCAGATTAAAGAGCATGGG
AGAAGATGGACCCCCCCTGCTTAAGCCCTTTGCCCCCTACAAAGTGGGGACCCACTGAGT
CATTAATCTTCACACTAAAAGTGCTATTAACTAATATACTTTTAATCCAGGAGATCCATC
AGTTTCTGAACCCTCTCGATCGAAGCATATCAAAGAGGAATTCCCAGCTCACCCTATCAT
ACGCCTTCTCATAGTCCAATTTCAAAACTAGCCCGTGAGTCCCGGTTTTTTTAACTTCAT
GGATGACCTCATGAGCCATAACCACACTCTCTAGGATGTATCTCCCCTTAATAAATGTTG
TTTGATTGGAAGAGATCAATATATGTCCAATAGGAGCCATTCTATTGGTCATAGCCTTGG
AAAAGATTTTCACCGCACAGTTACTAAGGCTGATAGGTCTAAAAAATCATGTCCTTGACA
TCCTGCTCTTTAGGAATGAGAATTATTAACACGAAGTTCAATCTATGAATATCCAGAACT
CCTCGTTCAAAATCTCTAACCAAGGCCATGAAATATTTTTTGATCAGATCCCAAAAGGAT
TGATAGAATAAGAAAGACAACCCATCAGGTCCAGGAGCGCCATTGGCATAGCTACCAAAT
ATGCACACTTGATCTCCTCCTCCGGGAAATCTCTCTGGAGGGTATCATTTTCCTCGTCAG
TAACCAATTCCTCCTCCTCCCAGAAGGAAGGACCAAGATTGATATTATGTTTTGGTTCAA
AACTAAAAAGCTTCTTATAAAAGGCAGTTGCAACTCCTAACATCTCCTCAGTCATTTGAA
CTGGACCATTGTCACCATTCAGGACTGAGAGGTGGTTCTTCCTGTGCCTATGATTAGCCA
TAGCATGGAAATATGCATTATTCCTATCCCCATCAGTAATATTACGATCTTTAGATCTCT
GCCACAAGGCAGTTTCTTCCTGTTTCCAAATAGAATCAAGCTCAGTTTTAATCTCGTTCA
TCCTGCATCTATCTTCAGCATTTAACTGATTTTTCTCAGAGAAGACATCTAAAATATCAT
ATTCCACCATAAGATCCCTCTTCCTTTTCTTGGTATTGGCTTCCAGGTTAATGCTCCACC
CTTTAATCTTTCTTCGAAGAAGTCTAGTCTTGTTCATCCATCTATCCATGGCATTATTCC
CTTGAATAAAAGAATTCCAAATACTAACCACCATCTCTTTAAAACCAGGTTGGTCAAGCC
ACCACTTTTCAAACTTAAACATCCTGGGGGATGTAACCCGCCGAGCACCCGTATCCAGGA
TCGGCGGGGTATGATCACTTCCCACTCGGGGTAAGGTTGTCAACACTGACAAAGGGAAAT
GATTATCCCAGGAGGTAGAAACCAACACATGATCAATGGTCGCAAAGATGGGGTTTTCTG
ATTATTACCCCAAGTATAACATCTATTAGCAATGTTAATTTCCATCAAAGCCCATTTATT
AACCCAATCATTGAATAGATAAACTAACTCATGATTAACTATGCCGTTATTCTTATCTGC
AATAGAATGAACCAGGTTAAAGTCCCCCTCCCCCAAAGATGACTCGAGAAGTGAGTCCAG
CCATTACATCATGCAGTTCTGCTACAAACTCCACCTTAAACTCATTATAAGTGGTGCCAT
AGACAACGACAAAATGCCAAACAAAATTATCTTGTTTATTTTTAACAGTAGCAATACAAC
ATAACTTCTTATCCACAAAACCAATGATATCAAACATCTCATTATTGAGACCCACAAGGA
TCCCCCTTGCTGTATTCACAGGAGGAAGCAAGTGCCAGGTAAAGTCTCTGTTACCTGCAA
TCTTTCTCAACATAGTACCCTCAATAACTTCTTTCTTAGTTTCAAAGAAACCAACAAAAT
CCACTTTATTAGATTTCAGGAACTCACATAGGCACTGTAATTTACCAGGTTTACCAAGAC
CTCAGATATTCCAAAAGGCCCCAATCATTTTATCTTAAAAGGGTGTGATTTTGCTCGCAG
TTTAGGACTCTCCACCTCTACATCAGCAGCGCCCCTGATGTAGATGGTGAATATCTCCTA
ACGTCACTATCAACTATCCCACAACCCAGGTCTATATTATCAGGGAGAACAATCTCCGAG
TTATTGTCCGCAAACTGAATACTCTTAATTCTCTCCTCATTAACCATATCAGAAACAATA
TCTAATTGTTCCATCTCATTCTTCCCTATGCATATATCAACCATATTTGTATAAGAAATT
AAAGTTTCAGGAGTAAGAGTAGCAAATGATTTACCTTTGAAGGTAGCTGGGATTTCCAGG
TTTTTCTTCTGCATGTAGGCAGCAGGTTTATCCATGATCTTGATCCCCCCATGTTCTCTG
GTCCTTGGTTTGTTGTTGAGGACAGGCCCCCACCTCACATCTTTAGTAGCATTGATCTTT
TTCTTCTGTCCATCTTCTCTCTCCAGGGTGTCCAACAAAGATTTCTTAGTAGACCCCAAT
ACAGTGGAAACCTCTTTAGTCAGACACTGCATCTCAGGCATCATCTCCTCTTCATCCTCA
TCAGATTCCAGCATATCAAACTTGCGTAGTTGTTCAGAACAGTAGTCCAAATGGACTGAC
ATAGGCACAACACTATCACCAGTAGGAGAACCCATATTCACCTCCGGATCCTTCTCCATA
TCTGTCTCTAGATCCACCATCTCTTCTTCAGGTAGTTTTTCCTTAGTT
