Contig Data
morexGenes
Links



Map Locations of contig_106740 (3481 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_106740

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_846 1 670 bp MLOC_846.1 Available Available None
MLOC_847 1 2700 bp None Available Available LOC_Os07g22504.1, FRAME:-3, EVALUE:4e-12, 13107.m09930 protein NADPH-dependent oxidoreductase, putative





CDS Structure of MLOC_846






CDS Structure of MLOC_847






Contig Sequence (3481 bp)

>contig_106740 3481 assembly3_WGSMorex_rbca.fasta
GATTGTTTCCAGCCGAGAGTTCCCATATGACATAAGCGCTCTTGGGTGGGGTGGGCCCTC
ATTCGCCAGGTCTTTGAGTGCCCGTCGTACCACGTGGTTGGTACACTAGGCTGATAGATA
CTTTACTTTAAGGATCTGGCACCTTCGCTAGACGGAGAGTAAGCGACTTCTATTAGCACC
GGACCGTCGAGTCGAATTTCTCGTGTCATGTGCAACGTCCATCAATGGTGGTTCATTAAT
GTCCATAGATTTAGACTCCTTCCCCCTTCCCTTATACGCAAAAGATCGAGAGGGGCCCGA
ACCCAAACCGAGAACGTAAACAGAATTCGACTCACTCTCGTATGGCTCGCCCTCGAGCCC
TGGGCGAGTCGGCCGGGTCTTTCCCTCTTGTTCTGTTTCCGCCACGATAAAGACGCACGG
AAGAACTATGGTATGCCCAGCGCGTGGAGGATCCGTTGAGAGTGTCCCTTGTCTCGGTAG
GGAACAGTACCTATTGTCTTGAAAAAAAAGGTCAGTGCTACGGTCCCCTATTGTTTGATC
CAATATTGACCGGTGCGGATCACGTTCTACTACCTCCGGTCCGTGGTTCGACCTCCCGTA
GTGGTCCTTGCTTTTCTTTTTGAAAGCTCCGCGGGGCCAATTTTGCGTACTTGCTCAGCG
TGCCCCCCTTTCGTCGAGTGCCCCGCCCGGTTCACAGGGCTGTTGGCCTACCAAGCAAGC
ACTTGCCCGCTGCTCCTGCCGCCTGCCAAGTGGGCTCCGCGCTCGTTATCCTGACTGTTC
TCTCTGCTGGGCCCTTTCCTATTGCTCTAACCATAAGCTATGGCAATTCCAGCTCGCACC
CACTCTGGCCCGCCCAGCGAGGCCTGAGTGAGCTCAGTGGTCAGCCCCTGACGTTAGGGG
TCTTTCGCTTTTGCCAGATCTATAGAGATATTACGAGTCCTCCGTCCCAGATTCCCTCGC
CGCGGCCATCTGGTTCACCGGTACTACCAAAAAGTCTCATGCTTACGTTACTGTGACTGA
TATATAAGTATGATCTCGGACTACGAAGACCCAGTCGTGCTTCTGGTTTCCATTCTCATC
ATCATATTGAAGGAAACTCCTCGTGCTCTGCCATAAGAACTTGGAGTCCGTATCATGGTG
AAGGTAAGGTAACGCTGTGATTCTTGCTCAAAAAACTGACCGAACACGTTCGAGTTATTG
GCTCGTCCGACCCGGCAGCATTCATGAGTCGCTCGTTCAACTGTCCCTCGGAGACACGGT
CGAGAAGTGCCATGCATGGTCGCCCCCCCCCGTCCTTTCTTTCTCTCGGTCCCACCAGGG
TGGGCCCCTCTGGGGTAATAAAGAAATGGATAAAAAAAGGGGACTTCTGCTACGGGCTAT
GCCACCCATTACTTATGAGGGAAGTCGCATCCGTCCCATCGCAAGCACCTACAATGTCAT
GATCACATTGGTTTATCCTTTTTTGGTAGTTCAACGGACGGTCGCCCCTCCAACAAGAAA
AGGTAGAAATATGGAAACTTCTCTGCCATTTAGATCGGAGAATTTATAGAGGAAATCGGG
TTTTAAATTTCCAGAAACCACACGATTATATAGCCAAAGGGAATACGCCGCGCCTAAAAT
CATCCCAAGCGCAGCTAATGTGGCTACTAAGCTATTTCTTTGGAAAGCTCCTACTAAGAT
TAGAAATTCCCCGATAAAGCTGCTAGTGCCGGGTAAACTCATATTGGCTAAAGTGAAAAA
GAAGAAAATGGTAGAGAAATTCGGCATGGTGCTCACTAAACCTCCATAATATCTAACAAG
TCGAGTCTTATGTCGGTCATATAGAACACCAACACATAGAAAAAGGGCTGAAGAAACCAG
TCCATGACTTAACATAAGTAAAATGCTACCTCCAATTCCCTGTATGTTCGATAGAGCCTA
ATATTCCCCCAGAGTACGCTGCTTACCCCCCGAACCGTACAAGATAGTTACCACCTATCA
TACGGCTTTCTAACTCCACTTCTTTTTCTGGTCGTTCCGCTCTGTCGGATCGATGGTAGT
CTCAGAGATCTGGTAACCTCCGACATTTTTGACAACACGCTTCCTGCTTCCGTTTTGAGT
TGCGCATCTTTCTCCCCGGGGCATACTATACTATAGTATCACATCGTAGACCCCCACCCC
AACTCTATCTTCCTTATCAGTGAACCGGAACATAGTGCATAGGTACTCTTCGATGCTGCG
AGGACGAGACGAGGTGACATACTACGATCACGCACTGAAGTTCTGCCCTTCGGCTCGGCA
TATGGAACCTCTCAGCTGCTCCCTCGGGATAGGTAGGCCCACCCCCCCTTTCCCGAGAGG
CGGCCGGGCTGTGTTTCCCCTGCGGCCACCCAGTGGCGGCAGAAAACGAAAAAGGGTGGG
CTCCGCGCGGTTCGCGTTTTATTGTAAAGAGAGAGCTTTTCATTCTCTTATAGAAGCCCG
CGCCCACGCGGGTAAAGCCCAGCGAAGCTGCAGGGAGCACTGAGCAATGGGGGGATGAGG
GCGACTCCGCCCACGGGTTGGACCACACCACAGGCAAAAGTCCTTCCACGGCAAGAGAAG
GGTGACCGGAACAAGAAAAGGGAGCTAGTCGTTGGAGGGAAGACAAGGCTCGTTCCGTGC
GACTCCACAGAAGAGTACGCGCGCTAGAAAAGGCAGCCAGCTTAAAAACGCTAGCTAGCT
ACTTTTGTAGCCTTTTTTAGTTTGGTTGCCTACGCTTGCTCTCCGGCGCGCTACGGCAAC
ACCCCCTGCTTGCTTCTTTCTGTTCGACGCGGAGCTCGCAGCCTCCCCACCCTTGCTTAG
CGTTCCACTTGTGATCCTGGAGGATTTGGAGAAATGCGCCCGACCATGAAGAATGGATTT
TTTATTTTCTTTCATGTGAACGGCCCTATCTTGTAAAGAATGGTTTTTCGTGCTATAGAC
CACGTTGAGAAAGACCAACCAACAACACAAATAAAGACCGTTCCATTTGGGTACCTCGAA
AGGGAGGTGCTCTTTATGATGCTACGGACGGCTGTCCGAAGTGCATGCAATGACGGGCTC
GGATAGGATAGGATTGTGCGCGCCGGGCCCTTCGGGTGTCCATATTTTGGCCGACCTTAG
CGTATATACTATGTTATGCGGCCGTAATATTTTGATACCTTCCACCGCTGTTACGCCAGA
AATCCAAGGTTCCACACGAGCTCCTGTTCTGCGGCGTGGTGGCAGGACCGCTAGGGGATT
GGCTCCGGGTGTAGGTAGGGTCAAATCCGCAGGGGTCATGCAAATACATAGGCCCCTTCC
CTTCTGCCGAGTTGTTTAGAAGGCGCTTTCCGTTCTACGGTCCCTCGGAGCGAAGGGTTA
GGCAGGTAGTACGGGCCCTCTGACTTCCAGCTATGTGCTGTGTGCGACTCCCGCGAAGCG
AATGAAGGGAAGCTCTTCGAGCTTTCTCCGCCAGCGGCTTATGTAGTGGTCGGCATTCCT
A