Contig Data
morexGenes
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Map Locations of contig_106605 (4379 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_106605

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_833 1 681 bp None Available Available None
MLOC_834 3 964 bp AK366157 Available Available None





CDS Structure of MLOC_833






CDS Structure of MLOC_834






Contig Sequence (4379 bp)

>contig_106605 4379 assembly3_WGSMorex_rbca.fasta
CTTTGCATTAGTGTTTGGTTTCTTGGTTAAAATAGGAGTGACCTTTTCTGCAATCCAAAG
TTATGATGTCATGGTTGATACTCTGTGTGAACTTGTAATACAAGTATGTTGGTGGGGGAT
TTGGTTGACCCTAATGGTACTTCCATCAGGTTGGCGTCTAGCAGAAATGTACCACTTGCA
AGGCTTGACACTTCCGTCAAAACCTGTGCATCTTGCATAAAACTTCTTTCTATCAGTCCA
ATTTGTCTTGGCATCAAACTCATGTTTGACTGCATAAGTCTTGAAACACATCCTAAACTC
ATCCATGTTTGGGAACAACTTCCCTACTGCAATAACATGGTTTTCCTTGTCATGCACATT
TACCAACTCGTCATCATGTGCATCATCTGCAACATCTTCCATCAATTGTCCATCCACATC
TTCATATGTATCTCTGTTAGCATCAGTAGGCATACTAGATTCACCATTGTCCTCCTTATC
TTCATCACCTACTGGAATGCCAAATTTTTTGGCCATCTCAGTGTCATCCAGTGGTGCAAT
GATTAAATGAGTTGGGTCATTTAATTATACTAAATTCCGATCAATAGAAACAACCATTGC
AACACCATCAGAACCCTCTTATGCATCAACCCCCTCAGGTAATACTGTAACTTCACCCGT
ACACATGGACATTATCTGCCTCTCTGAAGCCCAATCATCATCTACCATCTGTGAAGCTAA
CTTTGAGGGCACATATCCAACCTTAGAATCTGATTTCAGGTCAACAAGCTCTGCACGAAA
CATAGCCTGTTTGCTTGTCCAGCCATCTTGTCGATCGATTTCATCAACCATCTGTTCGCC
ATCCTCAATTCTCACATACTCTCATTTCCAATTATCAAACCGGAACAATGCTACCTCTTG
CTCTAGACCCAAAAAAATGCTCTCCCCATTTTTTTCCACAACATTCTTCACGACCTTCTC
TTCCATGCTCTGTAGGTCTTGTGGATCAATGTGTGCAAAATCAACCTCCCATTTCACAAT
TGTATCTCTCTCTATGTCCCGCACGCTACCATCACCTAGCTTCACCTTAGAAGGGAGGAA
TTCGACTGTGAATTCGAAGGTCCGAGCACCATCGCCCCTGTTTGTCGATGGCGGACAGTG
TGAGCTAGCGGAGCAGACGAGGCACAAATCGCATAGGTTGGAAAGGATGCACATTCAGGG
ATTACCTAGTCGATGCGGCTCCACCGCGGTCAGCCCCCCTCCCCCCACCCAAATCTGGAT
CAAATCGACCAAAATAGAGGAAAACAGAGGCGATGCAATGAGATCTAACTCGACACGGAG
GGAAACAAGACAAGGGTTCCGAATTCACTCACCACAGTTGTTGTCGTCGCCGATAACAAA
AGCTCCGTCGCTGCTGTCACCAAGAACAAAAGCTCTGGCGTCGTCGCCGACTCACTGTCA
GGAATGAAGAGGAGGGGGTGGGAGCAACGGTATTCACCTGATGCACTGCCAAATGGGGGC
CGTAACTAGATGCACTGCCAAGTGAGACCCACACTTCTTAAACAAAACCTCACTCCCATT
GACAACCATTTTAATCGTCCGATTGGAAATTGACTATTTGGGCTTCTAAAATATAGCACG
AGAGCTATTTGCTTCAACTATGTCACACTATATCCAATTCGCCTCAAATGTGTCATAGGA
GCTATTGGCCCGATAAATAGAGAACAACAAGCACAAAATTTGGGACATATCCAGCAGAAG
TTTCAACCTGTCGTTGCACATACATGCATCCAAGTTTATACCACTGATGTAGAGCAAAAA
ATCCAGAAATTTTAACTAGCTTGGCACCAATGGCTCAAGTTGAAACCCCTCTGTTCCAGT
TAAACTGCATCAGCACAAACAAAGATCCCTGGTAAAAATAATTTCCAGTAAATATTCACC
TGGTCTGTATTCCTAGGAAATCTAGAGGTTGGTAGATTCCCAACAAATCAATTGATAATC
AGATCTTGTACAGCAAATAACGTACAAAAGTTAGATGACAAGAGACAATTTGTTTCATAG
TGAACTTAGGGAACTTCATTTGCCATCTATTTATATTCCTCTCAAGAACCCACAAGTTTC
CTATGCACGTGTGCATGGAGAGAATGCTGGTCACCATCATGGTGATGGAACACATATGTC
AGAACCCCAACAAGGCACAGCACCGAGCCAACTAGGACCTTGTCATAGCGTTCCACCCAG
TGAAACTTGATCTGGCTAGCACCATAAAATGAGAGGGCCACCAGGGACGTCATCACTGTG
ATGGTACTGCATGCATAAAAGAACACATGTTAGGTTGTAATACAAAAGTAAAATAAATCG
ATAGTATGCATCTATAATACCCCATATGCGTAGTTGACTCAACACAAAGCGCCCCGGAGA
ATATTTAATGAAGACACTGTCATATACCCCTCAGAAAGTTGTGCCATCAGTTTGGAAAAC
CGACAAAGGTGAAATAGATCGACTAATAAAAATAGCTTTTAATCAAAATGGTACTACACT
AACCAAGTTACCACTCAGTTTACCATCATGCGACAAAATTATTGACAGTCCTAGCACCAA
TTAAGTACTGCCATGATATATAAGCACTTATGTTAGTTCAGCAATCTTACTGATCATACA
TGCACTACACACGAAGATTTATGCTCGATTTGGCTATCCCAGTGTTCCACACATCCAAAG
TTCAAATCATGCTCATGAGTGACAGCCATATAAGTTGGTCTGCTTCCCATTCAAGATGGA
GCATTTAGTTACATACCTATGGCTGTTAAAACTCCCTGAAGATTCAGAGGTGTAGTGACA
GCCAAGACTTAAGAGCTATTATCTTTAAGTTTTAGACTACTGATCTTATCAGCACATTGG
TGGAGACGTGGAGGCTTAAATACAGCACAAAAGTATCCTATTACTATCCAACCACCCATA
CACGTAGAAGGTAGTTTCTGGAAACATTTTACATCAACTGCAGGCCAGAAATAAAATTTA
CTTTTTGATGTAGTCACACCCAATAAAGCTTCAGAACGGAATATGCTATAATGATAAAAT
ATGCTATAATCAGTTTATTTTGAATGTTCCTCAAATCCTAAACCACTGACGAGTAGAAAC
CTTATCTAAGAACAAATTGGTTAATAAGCGCGAAGAGAAATGTCTGAAAAGAAAGGCTTG
CATATGAAATAATGAGGCTTTCCATTTCGAGAAATGTTACAAAAGAAAGGCTTGCATATG
GAAACAATGAGGCTTTCCATTTCTACTTCAACACCACGTACAGCAATACTGAAATGAATA
TCCTTATATCTTTCTTCCTTTTAGGCCCAACAAGCTCTCTGTATAAGTAAGGGTTAGGTG
ATCGGTCCAACAAAAAATATCTTGAACTTAGCATCATTATTTTACCGCAATCACAAAACA
GCACTGTCTAAATGCCTCGTATTGACAAGCAAAGTGTGTGGGGGGGGGGGGGGGGGGGCA
CCTGAAGAGAAGTACAATGATTGCAAGAAACATCATCGAGGATGAGTTGCCAACAGCAAG
AAACACTGGAAGAGTAGTTGCACAGGGTGATAATGCTGGTACAAGTACAAGACCAGCGAC
TGCCATCTTCTCCATTGGATGATTATGAGCATGGCTATGACCCCCTTTTCCTAACACAAA
CAACAGAATGTAACCTGCTCCAAGAAATATTAGCAACAGCGAGGCAAGTTTATGCACTGT
TTCCTCGCCCGCTATAGTATTTGCCATAGTAACTGCAGTTATCCCTAGAAGAGCGGTCGA
TACAACATGAAGGACGGCTCCAAAGGCAGCTGCAAAAGTTAGGAATATTTTTACTAATAG
TGATACATGTGGAACAAAAGAAATCCTTGCCAAATGATAAAGTACCATACTACCACCACT
AATTTACACAGAAAACAAGGTCTAATAATATATCAAAAAATACGGGTAACCTAATTAAAA
GTATCCTTGTCACGGGCTGGTGGGTTGGAACGGAGGTTGTAGTCATGGGAGACAGGTGGC
CGAGGGCGAGTCCCTCGCCGACCTATCGCTGGAGAAGGGGATGAGGAGAGGCGCCGAGGC
GCAGGAGCAAGGGGTGAGAGATTAGATTGTTTTCTGCTTAACTTTATTGATACCCAAAGC
TGGCTATATAAAGCCTGATTACAAGACTAGACTCCTACTCTAATTGGGAGTTGGAGGGTA
ACCTTCTACGGGACTAAACCTTTCCAACTTGCCCAGACTCCTAATCTAACACAACTTCTG
TAATTACAATATGCCATAGCTTAGGCTGGTGCAGGCCCAGCCCGCGTGGGTCGTCGCCTA
TAGGGCTGACCCCACATGACATCTCCCCCTCCATTCTGAAACAGCTCGTCCTCGAGCTG