Contig Data
morexGenes
Links



Map Locations of contig_105908 (4221 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_105908

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_777 1 530 bp MLOC_777.1 Available Available None
MLOC_778 7 1483 bp AK368245 Available Available None





CDS Structure of MLOC_777






CDS Structure of MLOC_778






Contig Sequence (4221 bp)

>contig_105908 4221 assembly3_WGSMorex_rbca.fasta
AACCTTAAAAAAATTTGGACCATTTCTCGATTTGTGCGTGTCATCCTTGCGCAGGGGCCA
TGCTAATCTTCTCTGTATCGTTCCAATTTTATCGGATGTCCCCGAAGGGACGAGTCTATC
TGCTAGGTTCGGCCTTATAAACCGGTGCAAACCCCTCTCGTTAGCCGAGGTGGGACTAAT
AAACTCGACCTCGCTGCTGTCCCCCGCGAGGCGAGCCACAGGAACCACCGCGGGGTGGCA
CGAATGGGCCGGCGGGCGCAGGGCAAGCGGATTCTTCCTCCGGCGGCCCAACTCGGAAGC
GAACATGCATACTGGCGAATGGGCCGGCGGCCCAACTCGGAAGCGAACTGGCACATGCAT
ACTGGCGAATGGGCCGCGTGCAGGGCAAGGTGATTCTGAGCGCTCGTGAAAGAACAAAAG
CTCTTCGTTTATTTCGTGGCGAGTTTCGACAAATGTTCCGAGCGCTAGTGAGATTTCATC
ATGGAATGCCATCCGTCAAATTCGTGGAAAACAAATCAACACGCAAAAATGCTTTCGAAG
AAGCAGCAGCAGCAGCCATGGGTTCCAGATCCCCGGTTGGAACAGTAATATTTGCTGTAT
TTTATTGGCTGCATACTCACAGCAATAATTGCGAATGTGTTTTGATATATCTTTTCAACA
TTTTAGAGTCCGGTCTGCAAAAATTATGGCAGACAAAATCATACTGTAGCATGTAAAAGG
TTCTGGAACAACGGTTGAATGATGATTGTATTTGGATGTGGCAAGTGTGTGAACCTGATG
CTGGAGGTTCTCATTTTGTACGAATCATGTTTGCTCTAAGACCTGAAGGTAGACAGGTGA
TGGCATTTTTAGTTCTTCAGCAAATCAGTTGAGTCTTGATTAATGAAATTAATATGTATA
CCTCATCGATTTGCGTCAACACAAAATGGCTCCCCAATATGTTCTTTCTATCTTTGTAGC
CACATTTGCTGCTTCCATGAGAACATAATGGTGCAGTTGAAATTACACATAATCCATTAA
ACCTTTGGAGTCTTCTCCTTGCAAATGGCATTACATTCCACGACGGATCAGAGCATAACG
CTCACAGGAAAACGGATTCAATCGTTTGCTCTTTATAGTTAGCCTATGGTACAACATAAC
CTCAGGTAAAGCTTGCTTTATCCTACCAACACCTACAAAACTGCCTGGCAAAGGCATGTT
GTAATCACTCTCATACACTGTGGTCTTACAGTAGTAACCTAGGGCGGCAAAAAAAGGTAA
CGCAGCCGGTTTGCAACCTTAGTTCTCATCATCCCCATCAATGCTGGAGAGCATGCTCTT
CAATACCTCGTAGGTCATGAAGGCGATTCCAACGCTAGGAACAACCTTCAGGTACTCGGG
GACTATGCCTCGGTAGAAGCCACGAGGACCTTCCTTTTGAAGGATTTGACGGATGGTTCC
AGTTATGCTTGATTTTTCGACTTGCGATGTCCCAGCCGCCCCGTGTAGTTGCATACGTCG
CTTTACAAGATCAAGAGGAAATGTAGCTGCAATATTGAATGTACCATTTACCATGGAGAT
TGGAAACCGAGTCATGTAAGATATACAACGATTAAGGCCATTAGGTATCAAAGGCCACTT
ACCTGTCGACGCTGCAATACCAGATAGACTCCCAGAAAACAAGCTCACGACAGCATTGGA
ATCATTCGGTCTGATACATATAAGCCCACATCCATCAGATCGAATCCGACAAAATAGAAA
TGGAAGCCAAGGAAATATGCAGCAAAGCTAAATAATGATGTTCACCTTTCCATTTGCCAA
TGAGACCTCAAGGATTCATATACATAAAAGCTGATTGCTATACCCGGTCCAACTCCCTGT
AACTCGTAAAAGTTACTGGCAAGTCAACTCAAAAACCATTCTCAGTAGAAGCATGCGGCT
TACCAATAATGTGGCCCCAAGGCCTTTATACAATCCTCTGCCACTCTCTTCTTTACAAAT
TGTGGACAACGTATGAAAGATGCCCTTGTAATACCTGGTGGTTTTCTGCAGAAAATTAGA
GAGGGCAAAGTTAGCTTACCAAATGATGTTCCTTTGGTCTGTAAAGCTGCATTGCATGAT
AGTTGAACCTAAGGACGTTGTAAGTTCCAACTGGAAGTTAAATTGGTTGATTTGGTTTTA
ATTGTTATTCACAAAAAGAAGACAAACATCATTGGTTAAGTTGAATATAGGTCCAAGGCC
TTTATACAATCCTCTGCCACTCTCTTCTCTACAAATTGCAGACAACATATGAAAGATGCC
CTTGTAATACCTAGTGGTTTTCTGCGGAAAATTAGGAAGGACTAAAAAGGATAGACCCAG
TGCTAGAAGCTCCCACACCAGGTCGGGTCTGGGGAAGGATTATATGAGGCAAGCCTTACC
CCTGCACAGTGCAATGCAGAGAGGCCGCGTCAAATCCAGGACCTCTTGGCACAAGTGGGG
AATACTTCACCACTGCACCAGGCCTGTCCTTCTGGAAAATTAGAAAGCACAAACGAATTA
ATGAGTTAGCTTACTAAAATCTGTTTCTTTGGTCTGTAAAGCTGCATTGTGAAGGTTGAA
TCTAAAGATGGTCTAAGTTCTGACTGGTAGTTAGATTGATTGATTGGTGACGTATTATTC
ACAAAAGGAAGAAAAACATTACCTGAGTTGCCAAACGAGTTCGAACAACATCCAACGGGT
AAGTTACAGATGCAGCTGTCACTCCCGCTAGACCACCACCAAGCAAACGTACAACACTAA
CATAATTTGGGTCATCCAGGCCAGGCACCATTCCGAGAAGCTGCAATCGTCATTCAAAAA
TCATCAAACTATAACAAAAAAGTATAAAGCCATGAACAATCTTACAAGTTAACAAACTGG
AACTTAGCGCTGACCTTTTTGTATCGTTCATATGAATAGAAGCTCATGGCGGAATAAGGT
AATCGATGTACAATGGTGACAAGATTGCCTTTCCAAAATGCCCTGAACCCTTCTTCTCGA
ACAATCCGCGAAGCCTCGTGCCATATACTACACTTCCTTAGAGCTGCAGCATCTGAATGC
ATACCTGCCACCTGTCGGATCAGTATGTCACAAGCTCATACAACACACTTTATCATTAAC
ATACGAGTTATGTGACCCAAAAATAATAATGCTGGGTTTGTATTCATGAACAATTTCAAG
ACTGCAATTTTGAAGCTATGACCAGCATATAATACAAAAAATTCACAGCCAAGGTTTCAC
TTCGGACGATTATTCGACACTATATGTTCATAACTGTCAACCAGGGATATAAAGTTTGGG
GCAATCAGTTAAAAGCGAGGTAAGAATCTATATGTCGCATTCAAGGAAGTACGTTGATAT
TATGAGCATCGAAAATCCTTTTGAAAAGCCCACATGTTAAGCCAGAAGAAGCACACCGGC
ACCTGCTCAGATAACCACATTAATTGTTACAATCCCAACATATGGGTTATGTGACACAAA
ATATTATATTGCTAGGTTCATATCCATTTCAAGAGATTGCCATTTTGTAGCTATGAACAG
CATAGAGTACAATAAATTTACAGCTAAGGTTTATCGTTGGAATGTGAATGTACACTAAAT
ACGCAGAACATTTCAGATGAACAACAATAATGGTTCATGACTGTCAACCAAGGTTGTACA
GTTTGCGGCAATCGGTTAAAAGCGAGGGGAGAATCTATATATCACATTCAGGGAACTAGG
TTGACATTATCAGCATCCAATTCGTTTCAAAGATCCTACATGTGGAGCCAGAAGAAGCAC
GCCGGCACCCCGAGAAAGAAGGAAATCCACATTAACCACCACATTAACTGCAATTGCTAC
ACCCCCGACGTTTTCCCCATGCTTTTTGGCCCCCAATTCCTTGGATGTCAGGGCACGCGG
AATCGCACACATTCAAAGGGGGGGTTCCTTTCGGGTCAACTCAAATCATGTCCTAGGCAC
AGAATCTCGTAGAATCGGACGGACGGCTCTAACCAGTCCTCGGCGGTGCTTCGTGGGCTC
TGAAATTCCCGCCTCGGGCTACAAATTCGCGGCTGCGGAAGCAAGATATTTCGCTCCCAC
GCCCCCTCTGAGCACACACACGATAACGCCGGAGAAAGGGGGGGAGGGGAGCCTTTTTTT
TGTTTGTTTGTTTACCTGGAAGAGGATGGTGAGGCGGGCGAGGGGCGCGGTGCAGGTCTT
GCTGACGACGCCGGCGAAGCC