| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_105670
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_760 |
1 |
1663 bp |
MLOC_760.1 |
Available |
Available |
LOC_Os08g30100.1, FRAME:-3, EVALUE:2e-78, 13108.m03115 protein 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed |
| MLOC_76159 |
2 |
962 bp |
None |
Available |
Available |
None |
| MLOC_76160 |
3 |
1436 bp |
MLOC_76160.3 |
Available |
Available |
LOC_Os04g53950.2, FRAME:-1, EVALUE:4e-162, 13104.m05570 protein glycosyl hydrolases family 16 protein, protein, expressed |
CDS Structure of MLOC_760
CDS Structure of MLOC_76159
CDS Structure of MLOC_76160
Contig Sequence (3607 bp)
>contig_105670 3607 assembly3_WGSMorex_rbca.fasta
CCCGCCCCCGCGCGCGCGTGCCGAAGACTACGACCGGGGTTGATGACATTATGGTTGAGG
TTAACACTTCGGCCACAAAGGACCAGGAGGATGAGCTCCTCCCTGCGACAAAGGAGGGAG
GGCCTGGACCTTCTAGGTCTCCTCGGAGTACAACTCCGAAGGGTCCTCCCTCTCCGGCAC
CATCAGTAGTAGTCTCTCCGCGAAGGGAGACTGCTACGGCACACCCGGAGCCATCCACGA
TGGAGCCACTCCGAACTGGATGGCCTAACTTAAGGGACGAAGGTCTTAATGATCCTTCCG
TTCGTAAAGAATGCCACACTCATCTGAGTGTGGTATTGCAAAGCATTCAGTCCGTTGACA
ACGGTCTGAAAGAAGCTTTCGACACGCTGCTAGCAGGCATGAAGGTAATCCACTTGCTTT
TTCCTTTTGTAATTATAAATTGTCTAAAAGCAATATTATGCCTAGTAGCCCCCAAATCAT
GTGTGAGTTTTAAAAACTCAAGCGGGGGTCAGGATAGTTCGGAAAAAGTGCATGTAACCC
CCAAGGATCTGGTGGGTTTATGAGAAACACCCTATCACAGGATTTTGAAAAAATCTGAAA
ACTTATAAAGTTTAAAAAATGCTTTACTGCAGGCTTTTATATTAGCCACAGCCCCCAACT
CCGTGGAGTTGGTGGAAATGAATCGGAAACTGAAGGTTTTCGAAGAGGAGCTGGTTGAAC
ACGCTCAAAGTAAGTGCCCAAGTTTTAGCTCTCTTATTGAATTGTTTCTTATGTTTGTCT
TTAAGTATATGTTGTTTGGATGACTACCACGGTTATTGTTGTTGACGTTGATCGTTTTAA
AGCTGAACATCGGGTACTTATCATTTCCGTTAATCAAGCCGTGCTCTTTGTGCTAACTAC
ATAGTTGCCTTTGCTGTTTTATTTTGTAGGCTCGCCTCCCCACATATGGTCAACTTGAGA
ATCTCTCCTATTATACATTTAAGTAAACTAGTGCAGGCTGCTCAACTTTTGTGGAAAGGC
TGTGTTATTGTGGGAGTAGCATATATAGAGAGACAGTGACGGATTGCCATTTGGATTTTG
AGAACTCTGATAAATGATTCTTACGTTTGCACTCCTCTCTCCGAGCCATCACTTGGAAAC
AAGGCTATGTTGGCCGACATGTATTAGTTTTGCAAGTTGAACATGTACGGTGCTTTTTTT
GTCCAGAATTATTTGTCGGGAAAATTGATGCATCTAAATATATTTTAATTCTGGATAACA
GACGAGTTTGTAAAGAGTTATGCGCGGAAAGGAAATTTAAATCTCATTCAAAACTACTTC
CTCCGACCCATAATGTAAAACGTTTTTGTAAGTTAGCATAGCTTGCAAAAACTTATATTG
TGGAGCGGGGGGGCTAACATTCAAAATTCAGGATTCAGCTTGTCCGAAAGCTCTGACCGG
GCCTATTTTTCAAACCCATTCAAAACCAAAATTCAAACTTCAGGAGTCAACTTGAGTGAA
ACCTCTGACAGCTTATCTGTTTGTGCCTCGTAATTGGAATGTTTTGGGATCAGCTACTGG
GTGATATATTGGTGCAGTCGGTAGAGAAAAAGATACATTTTGTGGGCTTCGATCGATGCT
GAGATTCAGAGCCTCAAGTGCTGCTGCTTGAGTGCAGACGAGACCTTGTAGTGCCGCTGG
ATCACCTCCTCCGCCGTCGTGCTGCTGTACCGCAAGCTGCCGTCGCCGTCGGTGACGATC
GGCTCTATCACCGTCGTCGACGATGCGGTGCGGTCCGTCCGGAAGAAGCACGCCACCGAG
ACCCGCGGTCCCACGCCGTTGGCCACGACGCGGTGCTCCACGCTCTTGAACCTGCCGTTT
GACATGATCTGCAGGAAGTCCCCGACGTTCACCACCAGCGCCCCCGCCACCGGCGGCACG
TCCACCCACACCGGCTGCTTCTGTTTTTCGCCGCCATCGGCCTCGTGGTCGAGGAGTATC
TGGAGGCCGCCGACGGCGTCCTGGAGGAGCACGGTGAGGTAGTTGGCGTCGGAGTGCCGC
GGGGTGCCGAGGGGTAGGTGCGGCTCCCGGGCACGCCGGGTAGTAGTGGCAGGCGAGGCT
GACGCCGTCGAGGCACCGGTGCTCCTCCTCGAGGTGGCCGGGGCGGAGGCCCAGCGCCTC
CGACAGCAGCCCCAGCAGCGTCCGGCCAAGCCCCTCCTGCAGCAGCCGCGCGTACTCCGG
CGCGACGCTCCTGCACGCCGACGGGATCTCCTCCGGCGCCGGCAGCTCCATGAAGAGCGT
GTCGCGCCAGTTGGCCGCCCGCGACTTGAACAGGTTGAGGTTGCTCTGGTACCGGACGCG
CCGGCCGAGGTCGCGGGTGTAGAACGGCGCCTTGGCCTCCACCGGCTCCTCGAAGAAGCC
GCGCACCGCCGCGAGCATCGCCGCCGTGGCCGCCTCCGGCACGCCGTGGCCGACCACCTG
GAAGAAGCCCGCCGTTTCCACCGCCTCCCTCACCTGCGCGACCACCGCGGCTCGCGCGGT
GCCCACGGCGGACAGGTCGATGACCGGGACGGTGAAGCGATGGGGTCGAGGCGTGGCGTC
CGGGAGGGACTCCGGCGGGTGGTGGAAGATGGACGGGACGGCGGTGACACCCCCGTCGAC
GAGGCCCTTCACGCCGGCCTTGGTGTCGTCGAACGCCTTGAGGTCGAGGGCACGGAGGTT
GTCGGCGGAGGCCATGGACGCGCGCTCGGTGGAACTCTTGAGTTTGTGCGCGCCACAAGT
GGAGTAGTCGTGGCTCTCTCTTTATCCAACGTCTAGTGGCTGCACATATATTCGATACAT
GCTGCTGCCGCGTCACCCACCACTAATATAAATGAATGATTCGGTGCAAGCAAAAAGCTA
CTGAATATCAAGAAATAATAGCCAGAAGCGTAGTGCGCATTTGTTTGCGCATATACTGGT
ATGGGACAAGATTTTACTATAATAGCACTACTTATGCAATATATACATGAAACAAAACAT
TAATGTACAGATTTATATTTTTAAAATAATTCATTATGTTGATTACAAAGAATACTTAGT
TTTGATTGTGAATTTTTATATCACATAGATTAATAACTGATGAACTGTGCGGCATGCACA
TGAGTTTCTTTTGCAAATATAACCTTGTGTACTACTCTCTCTGTACCTAAAAAACTATAG
TTGAAACGAATTAGTCTAGTTCTTTCCAGCTACAATTATTATTTAGGTATAAAAAAGTAT
TAACTTGGGGTAAAAATATTGCATGCCATGAAGATGAAATGGACTACTCAACCGAACCAC
CGTCGGCCACCACCTGCAGATGGGAGGGGAAAACATAACATGCCTGCTAAGTAAGAGGTT
GAGAATACGTATCACTCAGAGAAAAAGTAAGAGGTTGAGAATACCACTCACACTAGTAGA
AAATGAGTCTTTCGGTCGAAGCCCAAAACCATATTAACCGTGGGAGAATATATATATATG
TCATAGTTAATTTACGGTTTCTTGATCAATTCATAGGNNNNNNAAATTGCATAGGATAGC
AATATGTTTCATTTGAATCCTAAAGATAATTTTCTCTTTAGTTGTACTGAAACATGTTTC
CTTATTG
