Contig Data
morexGenes
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Map Locations of contig_105462 (1380 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_105462

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_737 1 591 bp MLOC_737.1 Available Available LOC_Os12g38430.1, FRAME:-1, EVALUE:2e-23, 13112.m03958 protein SR repressor protein, putative, expressed
MLOC_736 1 277 bp None Available Available None





CDS Structure of MLOC_737






CDS Structure of MLOC_736






Contig Sequence (1380 bp)

>contig_105462 1380 assembly3_WGSMorex_rbca.fasta
GTGCCTATGGACAAGTCCTATAAATGTAACTTAAGGCAACNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNATATGGAGATATATGCTCCAACACATCCTCCTGTTGAAAGC
AATATAGCCAAAACCAATCTAGTTGGGGAGAAAGTCATTGCTTTTAGTGATCCTGTTGTT
CTTTGTGCTTACACTGAGAAACNNNNNNNNNNNNNNNNNNNNNNNNATTATTCTAAAGCT
CCAAGTGTGATAAATAATTTGGTAACTTATACTGCAGAAAAAAATAATTCGATACATAAT
TTGAAATACTCAAAACACAGTAAACCGCAGAATGAAGCTTTCAGAATTCAAGATTTGTGA
GGCCGCAAAAGGTCAAAAAATTATATCCCAAAGCAAAGTCTACAATGGTATAAACAGTCT
AATAGAAAGCATGAATGAAGCTTTCAGAATTCAAGATTAGCATTTCAGAGTACGCAGGAC
TGCAAATCATACAACATTAATGATTCCATTTCCAAAAAAATTACAGTGACATAAGAAAGT
ACCATAACAAGAATTACGCCTTTCAGGTTCACCAGAATATCCCCTGCAAAGCAACCAGTG
CAAATGAGCACATAACATGAGATAAGGAAGAACTTCACAAGAATGGAATAGCATACCTGA
CTCTAGCTCTATTACGCATATCCTCTGGCCTTTTCCGTGACTCGGCAGCAACAACAACAG
TTATCTCTCGGCCAAAAAATAATGTGCGGTTCAAGTGATAAGGGTCAACAAACTCCACAA
ATGCAAACCCTCGGGGCTCCGTGCATATAACGATTCATTAGAAAAGGTAGGATAATATGG
AAATTAATGGGATAAAAGACAAAAAAGAGGGCATGAAGTATTCATAAAGAATGTGTGTGC
CTCTCATGTTACCATCATAGCAGTTCAAATGCAGTGTGCCCTCTATGATTCTTGACGAAG
CACAGTCAACGACTTACACACATTTCCCATCAAACATGAAGCAAGTGTTGCAAAACACAG
CTATGTCCAGGTCCTAGTATCCAAGTTTCTTGTACAAATTTCTTGTATAATGACTAAGTA
CGGTGATCCTCATAAAGAGTATCTTCGTAAAATCATTCGCTTCAAGTCCTCAATGTTTGA
AAAGTCTCAAAAGTACTTGAAATGAACTTCGTTTCATTTAATCTTCTCATGGACTACCCA
ATACAACTCTCTTACCTTCTCTTCACGAAATTAATTTTCTCAAAACAAATCTTTGTCTTC
ATAAAAGAACTTCTTCATTGGGGCAAGACTCTATCTTGCCAAGCAAATTAATTGTTAGGA
ATATAACAAAAATATTCTTCAACAAATCAAGGGGCTGTACTTACATCAAACCGATACAAT