morexGenes - Barley RNA-seq Database

Contig contig_104727
Source Contig contig_104727
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_104727 (8636 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_104727

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_639	2	3391 bp	MLOC_639.2	Available	Available	LOC_Os07g38760.1, FRAME:-3, EVALUE:2e-63, 13107.m04011 protein HEAT repeat family protein, putative, expressed
CDS Structure of MLOC_639

Contig Sequence (8636 bp)

>contig_104727 8636 assembly3_WGSMorex_rbca.fasta
ACAGTGAATTCTCTACATCCAGCGTGGTGGGAGTGCGGCTAGGCCTGGGGGTGGGGGGGG
GGGGGGGGGGGGCTACTCACAGCAAATTTCATTAGTGGGTCAAATAACTTTGCAAAGATA
GGATCGAAGTAAGATCGCATCACTTTAGCAAAAGCAGGCAAAAGATCTGAAACTGCATCC
ATGAGGACTTCATCATGATCGATGTCACCATCATCTTCACCATCCGACTCCACTTGCTGA
CAGCATGATTCTTGACGCAACAGAGCAAGTGTTGCCTCAGCAAGCCGTGGCATATCTGAA
ACAGCGACAAAAGGGACAGTTTTAGCAGCACGACCTAGTATCCCAAGTGCACCAAACTCT
GAGAAATTGCAGCTTACAAAGTTCAACAGCGGCAAAACCACAATCTTTCATGATATCAGC
TACACTCATGCAAGCTTGTGCGACTACTTCTTTGTCATCATCCTCTGTCATGGTCTTGAT
ATAGATGTTCATAATAGTATCTGGAAAAGAACAATAAAAATTGAGCATGGCTTGATGTGC
AGGTGGCAAAATAGAATTGAAGACATCACTTATAGTAGCAATTACCAAGAACATCCTTCT
GTTTCTCTAGGATATCCTGCATGTTAGAAAAAGTACACCTGCATCAGAATTCTGATGTTC
CACAGCAACAACTTCTAAATTGCCAACTTAACACAAGGAAATACTCACAGGATGTGCAGG
TATTGCCCTCAATGCAGTTAAGATGTCTGCAATAATAGTTTTACTATAGTCACTAATAAC
ACCACAGAACATACCCTTAATGAAAATCTTAAAAAAAAAACTTCTAATTTTACAAATTTG
AATCTCTAGGGTGTAGATGATTCAAATCAAACAAGACTAATCACACTGGTTTCTGCATGA
AACATTCTCTTATTGACCGTAATTGTTTGCAAACCATATACTATTTGTTTATGATCTGTT
TGTAGTTACCAGAACACAGTATAGGGTCCGTGTGATCCAGATAAATTTGATTTTCCAACT
ATACCACGCAAAAAAATGACAAAAGTAAAAAGGGGTATGATGTAGGCCTGTAGGGGTCTG
GGTTTGCATCGGTAGATCGATTTTGAGCCCCTCCATGGGTTGCTAGGTTCAGGTACACTA
CCAAGATTGCACTAGCATGATGTCCACTGCATTAAAACTTGATGGTTCAGCTTGAATGGG
TTAGCTGTTAAACCTAAAGAACAACTCAAATGATGGACATAAGGTAGAACTATACATCAT
TAATTCATTATATATAAGAACTTCGATCATGGGTGCATCTTGTGATTTAAATTAACGTAT
CTTGGTGTGAAAAGGTTCATACCGTATCAATAGACCATTGGATACTACTCCCTCCGTCCC
AAAATANNNNNNNNNNNNNNNNNNNNNNNNTAGTACAAAGTTGTACTAAGCTTAAATGCC
AGTTCTTTTCACGCAAGATTCTGCAGAATCCAGATTCTGGAAAAATCTCCCAGAATCTGT
CGCCATGTTCTTTTTGAAGATTGTAGTTTGAGATTCTGGAAAGAGTTGTATGTTGAAATG
TCTGTACTACCCTCTTCTCCCTTGCACTCTCCTCTGCATCCCGATTCATCCATGGAGAGA
GAGGATGCCTCATGGAGGACTGGAGGACGGGATGAGGCTGTAGCTAGCTTCAGGGTGGAC
GCGCTGTCGGCAGCCGGTGCAGAGGGTTGCGACGGCGGCGGCTCCCCGTTGTATCGGCGG
CTGCAGAGGGTGGACAGGGCAAACGGGCCGTGGAGGACCAAGCTGGGCTGCAGCGGGATA
GGTACCGGCGGTGGAGAAGACCAGGCCGGCGGCGGGGAGGACCGGGCCGGCGGCGGCGAG
GTCTGAGACGGCGAGGCGGGGCGGGCGGCGGCGCTGGAACCATAGCGATGGCCCTGCCCG
TGCAAGCTAAGCGAACAGATCGCATCGAGGGAGAGGGGGGCTCGATTTTCTCTGTACAGG
CCATGTGGGGCTTGGTGGCATTCTGACTGTAATAACCAGCTACGATAGGGGTATTCATTT
AACTCGAACCGTTTTCTTTTGAGGGACTAGCCAAAATCTCAGATTCCGGGAAAAAACAGG
TATTTGAAGATTCTGAGATTGCACTAGGATTCTCCTGTTGAGATTTTGGAAGCCTAGTCG
AGTTCTTTTGGCTGAGATTCTCCATAATCTGGTGAAAAGAACTGGGCCTAAGACATTTAT
TTTGGGACGGAGGGAGTATATACCATGCTGGAGACAGATTCTGTAGATTACGTCAGACAA
GTTTACTCATCTAGATACATTTTTGTATGTCAGATGACCATTGGAAGTTTGGAAACTTTG
CAATTACAACTAAAATCGTCAGCATCCCTATTAGTTGTTATTCTGTAGGCCTGACAAACA
AGGAAACCAAACTGCTACTACAAACATACATATTAAAGGGGACTAGGAAAGATGTTACGT
TTTAAGGAAATAATAGCCTGAAGCCTGACATCTTCATGAAAATATCCACTGTGCTTGATT
AAAATTTTCAACGACTCCTCCAAGTACCTAGTGTCAGTTCAGGAAATTTTAAAGAACAAA
AGATGGCAAGAATATTGTGTTAAAACCATTTTAAGGATACGGAGCATAGGCACTCTTTGT
GTGAAGTGCAAAAAATCCAATAGCCTGAGTTGCAGCAGCTTTCTCGTCTAACACTCCAGT
CCTCACGCTGATATTTCTAACTCTTGGCTCATCATCATCATCATCAGAGGAAACACCACT
AAATCCATTGTCAACACCATCAGCATCATCAATGTCCACAGCAGAACCATCATCCAAGTT
GCACGAGGAAAATGCAAGAGGCACAACATGAGGAAGATACTGCAATGTGCAACAACCATT
TCTGTAAACGTTGACAGCTTTCGTGAAATGAACAAAACTTAGACTACCCTTGTTACCTGT
GAGAAACTATCATCCAGAATCTCAGCAATGTTGCTAAAAAAACCATGAGTGTACTCCCTT
AGCTCACTATAATCCAATCCAAAACCCTGCATATATGAAGAGCATAAAGAATTGCACTAA
AGCCTGCTGTTTGTCTGAACTCTGAAGTATAGGAATTAGGACTCACAGAAATAGCAGCCT
CAATAAAAGGAGGTAATATGGTTTCCATTCTGGTTCTGCCAACTGCCATTGCTACTATTC
CAACAACCTCAGTAGCCCTAGCTCGTGCACACAAATCTTCATCCTTTGTGAGCACCATAA
AGCCTTTCATCATTTCAAGAACCTTCTCTGCGTATGGGATAAATGCCTGTTCTGCAGCAG
CTGCTACAGAGCCAATTGCAGACTGCAGCAAAACATAATCGTCAGTTTGTAAGATGACTT
AAGGGAAAAGGTTGTCACTGTCTTGACATATAGGATAATTATGATCAATGATTTCCATAC
AAACCATGCATGTCTCTTGCAGGTTCCGGGGACTGCTCTGTAAAGAGATAACTAATCTGC
ATATCAAAGGCTCCAGATATGGTAGGATATCTTCACCCATATCTTCACAGAACGCCGCCA
GTGCATAGTATGATTTCTCCTACAAGATCCCATAGCTTATTGGCATTAGTTAATTATACT
TCAGAAAATGTCTCAAAAGCTAATCAATAATTCAATATCATTTATATCCAAAGTTTCTGC
CTATTTATCAGAGATGATGCCACCTGAAGTAGGTCATTTTACCTTAACTTCATCTGATGG
ATCTTCAAGTGCATTTAAGATGCATGGAAGTACACTCTCATAGTGAGATAGAATTTCTGG
CTGCAAGTGTTCAGCAAACTGACCAAGAGCAAAAGATGCAGCACCTCTAACCATCTGCTC
TTGATCCTTTAAAGCTTCTAAAACAACTTTGAGACATTCTTCCAACTTATCCTTAAAATG
TTCACAACAACCTTCTGAGACAACACCCAGCGAAGTAACAGCAGCCTCGCGATACTTGGG
ATTAATGTGACGAAAGTTCACAGAAGCAAATTCAAGAACTGGTCCAAAAACGTGTCTTGG
TAAGTTGATAGCCATTGTATCAATAACTTCGGCCGCAGAACGATCTGCCGCTAAATCAGA
ATCTTCGTCTTCATTAGCTGTTTCTGTAAGCAAGGGGCACATAACTTGTAGAATAGGCAC
AATCAGCTTGTTCTTTTTTAAGAAAGATGCTTTAAATTTTACAAGCCATGAGATTATTTG
AATAGCCTGAAACAAATAAGAGCAAGTTTACAGTCAGTTATTTTGTAAAATCAATAAACA
TATAATCAATAATGCAGAGAGCGGATCAAACCTGTTGCCTTATATTTATTTCCATATCTT
GGTTTGAGCAAACTTCAAGCGAGAACTGCACAATTGATCTCACTGAATCTCCAAGAAGTG
GTGCAGGAGATTCAATTAATTCGTCGAATATTTCAAAGGCAATGGAAGCAACATCGTCAT
CTCCATTAGCAAGACACTGCCTTGATACATTCAAGATACTGGGAATAAAGTCCCGAAACA
TCTTTACCTAGCAGTTATACCAATACAAGATCTGCTCGTCAGGCATAAGAGGCAACTCTA
GCAGTAGCATGACATACTATTTAACATTGAAAGTCAACTAGGAGAAACTACAGCTCTAAA
AAGAACAAGATGAACAAAATTACTATTGTTGCATGCAAAGAGAAACTATAAGATCTAAAA
GAAGAACAAGACAAACAAAATTACTATTGTTGCATGTAAAGAAAACAACAAACGCAGAGA
AAAACACAAGTATTACTTAATAAAAAAAGCTTTACTGAAGAACGCAATGCCAAAAGGACT
ATAAGAATGAAAACTATGATGATACTTCTTTCACCTCGAAAAGTAAATGTATAAAATCGG
GGAACATAGGAAGAACTTACAATGTCCCCTCCTTCATTGACATACTCTATGAAGGATCCG
ACGGCCCTGTTTCACAGACCAAAAAATAGCTTTACAGTCACAATATGGTAAAATGAGAAA
GGCCACAATAGCGACTTATCACAAACTTAATCGTACTTTAGGGCAGCGATTCTGACTCGA
GAGCTGGTCCCATCTTGCAGGCATTTCAGCAAAATAGGCTGTAAATCATTCAGATGAGAT
TGAAACGTAGTCCCAATAGTTTCAGTAAGGGAGCTGAACAGAATTAAAGCTACCTGTAAA
GAGAAGAGGGAGTCAGTAAGCATTGACATTTTGTTAGCAGATATAAAGCAGCACATGTTT
CTTTCCTGTATGGTTCACTTGAGATAATTGATGGGTTGTTCACAAACAATTCCTATGAAA
TATAGAACTTGGACTCTGATTTCTCTGCAACACTGCATATACTACATACTACATCGGAAC
ATTTGATGTCAAAGAATGCACTATCTATTATTTACACATTGCTGTATTGGCATCCCAACC
CCACTAATACACGTATAGAGATTAGAGAAAGAATAGAAGAAAGTAAACACCAGGTAGACA
CTTCCATCAATATAATGAGAGAATGGTGTTAGGACTTCGCACGTGCATGGGCAGTGTTTC
CTTATGAAATCTAGCATTTGAAGGTTATGTTAACTAGCAGGAGAAAAATCAAAGCCTTAG
TGCTTGAAATTTGCAGGCTTTTTGGAAGCTAACATGGCCAGTCGCACATACTGTAACATC
CATGAATAGTTAAGTTATGGATGGTCTTAGGTTCCAGCATTTAGCTCTATTTGTATAGCA
ATATGCCAAACAAACAATTATGAAAGAGCAAGCCGACATGTGGCCGCAATCATGATGACA
ACGCGGACTTGTGGGGCTGGCAACCCGAGGAGGAGCAGAACAGGGGAAGCGGATGAAGAT
ATCACAGGTATGGGTTTTTTGAATCTCAAGCTCTTTACATTGCTAACATAGTGTCCGTAC
TCTCTACTTATAGTACATAAGAAAGTCGGTTGCTAAATCGACAATACAGGTCTAGTAGCT
GTCAGTACACGCAAACATCAAATTAACTACTTGCTGACAGCCCTGTCTTACCGACTAAGT
ATGATCACCCGGCCTATATGAACTGACCTCAACTAATACTTAGCCAATTAAGCAAAGGAC
AGAAGGATTGCAAGTTTGCAACTGACAGTTCTTAGAAAAACACCAAATCAAAGAAAAGGA
AAATGCAAGTAAGCTCTTATTGTGGTCCACATGTATCAAGTATTATGATAAAACCACATG
GAATGTTTCATTATAGACAAATATACATATGTGCGCCCTAAACAATGCATGCATACATAA
TTAAACATTGAACATACATGGCAACTACTCTCTCTGTACCTACATAATTGTAGTTGGGGA
GAACTATTAATCGTAGTTGGGGAGAACTAGTCTAGTTCTCCCCNNNNNCAATTATTTAGG
TACAGAGGGAGTAAGAGATACACTTACTTCCCTATGTTCTTCTTGTGGACTTTGGCTGCA
TTGGAAAAGGAACGGTAACAGCTCTTGCCACTCTCCTGCAGGGACAGCATACTTAGCAAT
AATGCTCACGACATTTGCACTAGCTCTCCTTACAAGATGACTGCATAAGAAGCAAGAGGA
AAATCAGTTCATCATCCTCTCAAAATTACGTGTGGAAAAAACTGACGCAGATTGAACAAT
AATGAAACATCATTTGGCATTTGCACAAGGGTGGGAATTAGCTTGATAATTGGTGGCTAC
TAGCTAGTCCCAGTGAAAACAGATCAACCATGCTCAATCTTGTCATCGTAACTTGTTTAA
GCTGTAGTACGCATATCTCGACTTCAATATTTTCAGTTAGCCCAGTTTATGGTAACCCCA
TTGCCATTTCATAGTTAACAGAATCAACGCTTGTGCCATATAGCAGAAATATTAAAGTTC
AAGTTTGAATCGAACAGATAAACCTTATATGCAAATATAACAAGTATTTAATTAAAGTGT
AAAGGAAAGGACTTTTTATCAAGGAAGAAAATCTCTAATAGTGAATTTCTGAGACATCAT
AAATATTACGTAATCTAACATTTTGAATCATTTACTTCGCACTTTTTCCATGTGTACTAG
GATTCGATTAAGCTCTTTCCTCGCATTTGTGCATTTCTGCCTCCTATTCTAGCTTCCTCC
TTCGAAGTATATTTCCTACTGTTTTCCCTGAAAAAGGCATACCAAACCGGCTACAACTTT
CCAGCGATTTATTCATTTACGGAAAAATTCACACGAAAGTATCTCCATTTCGCAACAAAC
CATTTGACACTTGGAATACCAGCATATGAATACACCATTATACAAAGAGGAACGGCGGTC
GAGCAGCCATCCGTTGTACGACGGCTTAACCTATGGAACATTAATTCCCCCGACAGGGTT
CCAGTTCTCACTAGGTCTAACAGTTGAGTTCATCGTTACTCTGACACACAAGACGACCCC
GTGTGGCTGAGGATACAGCAGAGGACAAATTCTAAATTACGGAGAGGCAGGGAGCGTCGG
GTGGGCAAAGCAAGCACCTGTTGTCCAGGGTGATGGACTCGATGAGGGCCTGCTTTAGGG
AAGACTTGGCGTGCGGTGGAAGCTTGGGCCAGTGGGAGGTGATCTTCTTGCGGAGGAGCA
CGGCGGCGAGCTGGCGGACGTTGGGCGTCTTGGCGGTGCGGAGGTGGTGGACGAGCGCCG
GCACGACCTGCGGGTCCCGCGCCAGCCGCCGGATCTGCTCCTCCGCCTGGCGCCGCGCGT
CGTTGTCCGGCATCAGGAACTGGATTAGCAGGAGCTCCAGGGACTGCGCCATCCCTCCTG
CCCGCCTGCTGCCTGAGCCCGCGGGCCTCTCCCTTCCTCGCTTGCGGTGATCGGCGGCGC
CGGCGGCGGGCGGGGGAGGTCCAAAACCCTACCGATTGGGTTGGCGTGGGTTGCTCGGGT
TTTGGTGGCGTCGCGCGTGGGGGCGGGAGCGGTTTATTAGTGAGTAGGGGTAGTAAGTTG
GGATATTGCTGTCCTTGGGTGTCTGCTTTGTTTATTTCCATTCCTTTTCTTTTTTAGTTT
ATTTATCGGTTGGTTGCGAATTCTTTTCTGATTTCTTTTAGAATCGTTTCCAAAAAAAAG
TATTTAGACTTGTTTCGAGTGTTGCTGATTGAGGAGTTGGACCTACAAATCAGGTTGCAG
ATGCGGCTGTCTGCCGAACACCGAAGCGGGAGCGTGCGTTTTTAGCGGACATCGCGGGCA
GCCCGCCTCACGCCACTTCACTTTTGACGGACAACGTGGCAGCCCGCGTGATCTCGTCAA
AGACCCGCCAGACAGTCGACGCAGGCGGTGTTGCTGTTGCTCGTCGAGAACATCAGGGCG
GGGCCGAGGGCGACGAGATTAACAACGGTGAGGGCGCAGTGCTGCCACCGCACACGCGTA
CATCAGCGCCTCCGGGCCAAAGGCGAGGCATATCATCTCCTTCTCGATGTGGTCCTGGAT
GAGCAGCAACCCCTACGCCGTGGTCCTTGATGAGCAGCAGCCCCGCAGGGGTCTGGTCCG
GGTCAGTCCATGTGTCGTCTCCTGCACCACCCCTTGCGCCATTACCTGGACGAGGGGGGT
CAAGGTCGGGGACAGCGGCGAATCTGGCGGTGGGGGAGGCGGGAGGGGTTGCGCCGGGGT
GCGGCGGTGCGGGAGGGGGATTTGGGTCGGCCGCATCGGGTCTGGGGCGGGGCGGG