Contig Data
morexGenes
Links



Map Locations of contig_103956 (5202 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_103956

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_551 4 528 bp MLOC_551.2 Available Available None





CDS Structure of MLOC_551






Contig Sequence (5202 bp)

>contig_103956 5202 assembly3_WGSMorex_rbca.fasta
TATCTAGGTGGTCCTTAGAAGCATTGGTTAGTCCATTATAGATGATATCAATTATTTCAT
TCTTTTCAAAGTACTACAGGAATCGGGCATTTTGCCGTCACGATGCTACAGACGGCAAAG
AGAGAATTACAGACGACAAAAATTTTGCCGTCAGCCCATGATGGCAAACAATGTCGTCAT
CCCATGTGCCCGCAAAGGGTGTCTTTGCCGTCAGCGGCCGCGAGAGCAGACGGCAAAAAA
TTTGCCGTTAGTCAAATTATGTTGCCGTCTTCTGGGCTGGTAGACGGCAAATATTTGGTA
GGAAGACGGAACGGCCTAGCTAACGGACGACGTTAGTCATTTTTGCCGTCTGCTTGACGA
TATCACAAACGGCAAAATAGTGTGTTGTTTTCCGTCTTCTTCATATGTACAAGACGGCAA
ACCACCTCAAAAATTTGCCGTCTGTCCACCGTGTACAAGACGGCAAAACCACATCATATC
TTTGCCGTGTGTTGATGTTGTTCAAGACGGCAAAATAATAGAAAATATAACAATATAAAT
AAACAATATAACAGGAGAAATAGACAATATAACATAAATAGACAATATAACAATATAGTC
CATAACACATTCATATATATATATATATATCACACACCATTCCACATCAATATAACAAGT
GTTGACAAATAAGATCACAAAGGTTGGCCTCCACGTAAGGCAAAACACATCATTGAATCT
AGAAGCAACAACACCTAACCTACTGCATGGACACTATAGTACATACCCCAACTCCACAAG
CGCACTACATACTGATTCGCGATGCCGCCGATGATGCAGCAACGACAACCAAAACAAAAA
AGGCAAGGGAGGCTGGTGGTCCAGGATCCTGTCTGCGCGCCGCCTCTGTTTGCCACCTCT
AGATGCCAACAGGTCCAAGTTGTGGTCGTGCCATAAGCATCATTACCATTGCCTCCCACC
CCCCTCCATCATCAGGCTTATTTATAGCTGCTGCTCGTCCTCCTACTCCATGTCTCCATC
TGCAAGGACAAGAGCAAGTTAGTTGAATGGCATGCACATGATAAAACTGCAAGGCATATA
TATTTATCTACATAAACTGCATGTGAACACATGTGACGAATTGATGACTGAAATCTGTAC
TGTACTGATAGGTGTTTATGCGCTAATATGTACATGTAAACACTTCACCGGATATTTCCT
TCCAAACATTGTAAGGCAAAGATATATAGTGGTACTACACATATTGAAGGTAAACCGTAT
TGACTCGAAAGCAATAAATTAACGGTATATGTTTGCCAACATAAAATTCTATTCTCAGCT
TTTCACACACATTTGCATGTTTCGAGATACGAAATGCAACTGTTTTGCAGAAGAAAGAGA
TTATTTCCTATGAAATGCACACCTTACAATTAAATAAAATCATTGTTGAGCAATAGATAA
AAATAGTATCTCTTGAGTTGTGACAATCCTAGATTGATATTATAGCTTTTCAACTCATGT
TAAATAAACATAGCAGATTACAACACTTGGAAATCATAGAGATTTCTATGTATAAATAGA
TAGGAGTAGAGAAAGAAGCACCTCTGAGTGGTACACTCATTTCTTGTATACTTTTATCTG
ATGGGTTGTGCAACAAGATCAACCATTTTCTTCAGACTCCTCCAAATAGAGTATGCAACA
CCTCTACTAAATGTAATGTAAAAATGAGATGCAACTAAAGAGCAGATACACAAGCAATGT
AAGCAATTTAAAAACAAAATTAGCACATGCGTGCGTCCATCAAAAGCACATTCAAATATG
TACAGACTAGTAATATATAACACATCTCATTCACATTGATTTGTACGGCTTCGGTACAAC
CGTGTCATTGCATATCAAGGAAATAGTAAACTATTGCACAAAGAGATGATGCACTACATA
TCATGTTTGTAAACAAGTTCACTCTTCCAGATTCTCAAGTCCTACACATGAGATAACATG
GCAAAGAAGCAACGGGAACATTCATTGTGGACCATGAGAAACAGCAGTATAAAAAAGAGT
TCACTTTTTTTTGCTTACATTATAGGATATATTTAATAGCTTGTTCAATGGCACCAACCT
AAAAGTGCTACCAAATCTGTGGTGAAATGAATAGTAAAAGGAACGCTTCCTTAAAAAGCA
AGTCACCAATTTTTATCTATTGTAAAGAGAAAAGAGGAACACTTTGTTAGAAAAATGAAC
AAACCCAAAAACAATCTTTGCACAACCAACTCTTGGTGCCCCTCGAACGTAACAAGTTCG
TTGGGCCTGTAATGACCATGATTTCCATCGAGTTTTTTCTCTTCTGTAGATATGCTCTCC
TGTAATAATATTGAAAGAACCAAGTCAGTTTCTCACTAATAATCACAAGACAAAGATGCT
GGGAAACTAATCCTTACTCCTACAGGATCAAAAATAGTGCTCCCTGTGTAAATAAATATA
AGGACGTTTAGATCACTAGAGGGAGTACTTTCTAACATAAATATTAGTGTCAATTGAACT
CTCACAAGTAAGACACCTCCTTGGTAAGCTCGACTACCACAAATTGAATATTAATTCTGT
ATAGGATTACACTAAAGAAAACAGGAAATCATTTATAAGTTGACTATTTGTGGGGCCTCA
TTGGGGTTTGATATTTTGAAGGGACAGACACACAGGATAGTAGTGCCATCATGATGAGTA
CTTTTCTACTAACAACCATCACCATTAATAGCATACCCAAGACTGGACCTGGAGCATTTG
GAACATCTCACTCATAACTAGCAAAGGCAGCAATAGGTATTATATAACAACCTACAAGCT
CAACCATTAAGACATGTTTATATCTTGCAAAAGAAACATGTGACGTTTTATCAATCAAGA
TAAAATTAAGCGGTCCAAGTAAACATGCTCGAACAATAATTATTTGGAAAACATTATTTG
TCCCTCTTACATGTAAATCCAATACCCATTCAATACTTGGCATCACTAAACGAGAAATCT
AAATGACAAAATTAGTAATCTCTGCTCCTACTTGAATGAGCTCAACAAATATGACACCAT
GCACTCCGCATCATAAACACTAGAAATCACCATGGCCAGCACATGATTTCTCTAGCAATA
GGGCTCCATGGTTGTGGACTCGCGCAGAGCACGAGCGTTAGCATGAGTGAAGCAGAGTAG
AGGGGCAGTTGGTTGCTTACCAGATATGCAGGAGAGGAAGAAGAACGACTGGATTCATCA
GAGTGGAAGAAGAATCACAAGGTGGCTGTGTCGTGCACCGCCACCTGCGCGCATCAGAAA
GTGCTTCAGGGAACCAAGCCATGATCGCTTATGCATCAGGGCTACCAAATCGAACAAAAC
AGGGGAGGGGGAGCAAAACATTGACCTACTGGTAATATAACATATAAACTCTCTTTACAC
TACTAAAAGACGTTTTGTGCATAGCTAATAACATATCACACACTTGACTATTTAAGCAAA
AAACATGAGCTGCGCCTTCAGACCTGCTGCTACTACAAGTGTTGATTTCTGAATTGGTAC
CTAAGCACAAGTTCAGTTCATATACATAAATATATTATGTATGTTTGTGCATGACCATGC
AGAACTGAAGTGAATAATGTGGATAGTGACATATACCGATCGACATGGAACAATATACTA
TGCCGGTAGATTTTCAATCACGTGTCTAGAGGAGAATTCATAGTTCTATAATTGCACATG
GTCGGCAATGCTTTACCTCCACTAATAATGCATATTGAACACTTAACTATTTTTAGCTAA
ACATGAGGCGCACCTTCAGACCCGCTACTACAAGTGTTGAGTCTCAATTTCTTTTGTACC
ACAACATAGGATGAGCAGAGAGAGAGATGACAGACCCAAGCTGCTGCTGATTTGATGGAC
CTGGACGATGGTTGCACCATAGATTTGCTTTCTAAGAAAGCGTTCCTGTTTTCTCTGGTC
AAACCCAAGTCACCATAGAAAAATGAACATGCCCAAATCTATTCAACATGCTCTAAAGCA
ATCTGCTCTAAAATCAGAGAGCATGCAACTTAAAAAGGATTAAATAAGAAACATTTAGAT
CTCCATAGGGATGCAGATCGCCCCATCTCCCTTGCCTGTTTCTCGTCTTTCTCGTCCTTT
TACACCTTCTCCTCCTTCATCATCCCCTTCTACTCATTTTCTCTGGTCATGGAATGGACC
AAACTGATGCCCCTAAAAACAAACCATTCAGATCAGAAATTGTGCAAGGGAAAAATGAAT
TTTTCTTCCCAAATCAAGCGACGTAGAAGACCGCCGGTGGCGTAGACGAGGGCATGCCCC
AGACCCTAACCGCGGATGGATTGGGTGAGAGCGTTGGAGCCGTGGAGGGAAGGATTTGCT
CGGATGGATCAACACGGCACGACAAGGTGATCTCGTCAGCGTCCTGTGCGCCGGCCATGG
CCACCGGAGCTCGCCAGAGGCACGCAGGTGTCGGAGATGAGGTCGCACCCCAAACCCTAA
CCGCAGGGGGTGGATTGGGCACGAGCATTGTAGGCAGGGATGGACGGATCTGGGCGGAGG
GATCAACGCAACATGTCTACGTGAGTTCGGCAACGTCCCGCGCACCGGCCATGGTTGCCG
AAGCTCACCGATAAAGTCGTCGACGGCAGCGGCGGCGATGACTAACCCTAGGTCGCGAGA
GGGGGCAGAGGAGATGTGGCTGCGTGGAGAGTGTCTTCGACGCGGCCGGGTGGAAGTTTT
CCTTTTGTTTATTTACTTCCTTTTTTATTCTCTCAGGAGAGCGTGGAGGTTTTCTTTAAT
TGTTCAAAGGGTCTTTGCGTGAGCTGGAACGACGTCAGACGGCAAAGAAGATGTGTTTTC
CGTGAGGTGCGTGGACGACACACGGCAAAAGTCTTGTCCCGTTTAGTTTCCGTCTATATC
CAACGTTTGCCGTCAACGGCTAGGAAAGCAGACGGCAAACCATTATTTTTGCCGTCAGCG
TACCTAAATCATGACGGCAAAGATTCTTTGCCGTCAAGCTTCTTTCGCCGTATGTCTTTT
GAAATCTTTGCCGCAAGTTTTGTTTTGCCGTCAGTTCCTAGATGGCAAAAAGACCATTGC
CGTCTGCCCCGATAAAAGGCTGACGACAAAGAGGATTCATGTCGGCAAAATAGCCGATTC
TTGTAGTGAGGGGGTGATGAGGCAAATCATTCAGTAGCTGGA